RNA–Protein interactions for RNA: ENST00000284384.6

PRKCA-201, Transcript of protein kinase C alpha, humanhuman

TSL 5

Gene PRKCA, Length 2,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-201ENST00000284384 MYO5CQ9NQX4 1742 aa11.16□□□□□ -0.62
PRKCA-201ENST00000284384 GLI2P10070 1586 aa11.15□□□□□ -0.62
PRKCA-201ENST00000284384 UHRF1BP1LA0JNW5 1464 aa11.15□□□□□ -0.62
PRKCA-201ENST00000284384 RPRD2Q5VT52 1461 aaKnown RBP11.15□□□□□ -0.62
PRKCA-201ENST00000284384 NCOA1Q15788 1441 aa11.15□□□□□ -0.62
PRKCA-201ENST00000284384 DIP2BQ9P265 1576 aa11.15□□□□□ -0.62
PRKCA-201ENST00000284384 POLR3GLQ9BT43 218 aa11.15□□□□□ -0.62
PRKCA-201ENST00000284384 ZMYND15Q9H091 742 aa11.14□□□□□ -0.63
PRKCA-201ENST00000284384 PLXNC1O60486 1568 aa11.14□□□□□ -0.63
PRKCA-201ENST00000284384 PTPRGP23470 1445 aa11.14□□□□□ -0.63
PRKCA-201ENST00000284384 ANKRD30AQ9BXX3 1397 aa11.13□□□□□ -0.63
PRKCA-201ENST00000284384 IFNLR1Q8IU57 520 aaPredicted RBP11.13□□□□□ -0.63
PRKCA-201ENST00000284384 TEX14Q8IWB6 1497 aa11.13□□□□□ -0.63
PRKCA-201ENST00000284384 PLEKHH2Q8IVE3 1493 aa11.12□□□□□ -0.63
PRKCA-201ENST00000284384 SIN3AQ96ST3 1273 aa11.12□□□□□ -0.63
PRKCA-201ENST00000284384 RSPH6AQ9H0K4 717 aa11.12□□□□□ -0.63
PRKCA-201ENST00000284384 SAMD9LQ8IVG5 1584 aa11.12□□□□□ -0.63
PRKCA-201ENST00000284384 PZPP20742 1482 aa11.12□□□□□ -0.63
PRKCA-201ENST00000284384 ARAP3Q8WWN8 1544 aa11.12□□□□□ -0.63
PRKCA-201ENST00000284384 CFDP1Q9UEE9 299 aaPredicted RBP11.11□□□□□ -0.63
PRKCA-201ENST00000284384 ANKRD30BQ9BXX2 1392 aa11.11□□□□□ -0.63
PRKCA-201ENST00000284384 PLEKHD1A6NEE1 506 aa11.1□□□□□ -0.63
PRKCA-201ENST00000284384 ZNF428Q96B54 188 aa11.1□□□□□ -0.63
PRKCA-201ENST00000284384 CCDC141Q6ZP82 1450 aa11.1□□□□□ -0.63
PRKCA-201ENST00000284384 UNC13BO14795 1591 aa11.1□□□□□ -0.63
PRKCA-201ENST00000284384 C9orf84Q5VXU9 1444 aa11.1□□□□□ -0.63
PRKCA-201ENST00000284384 ZCCHC11Q5TAX3 1644 aaKnown RBP11.09□□□□□ -0.63
PRKCA-201ENST00000284384 ARHGEF12Q9NZN5 1544 aa11.09□□□□□ -0.63
PRKCA-201ENST00000284384 RSPH4AQ5TD94 716 aa11.09□□□□□ -0.63
PRKCA-201ENST00000284384 MPHOSPH9Q99550 1183 aa11.09□□□□□ -0.63
PRKCA-201ENST00000284384 TTC37Q6PGP7 1564 aa11.09□□□□□ -0.63
PRKCA-201ENST00000284384 MBD5Q9P267 1494 aa11.09□□□□□ -0.63
PRKCA-201ENST00000284384 RRP7BPQ9NSQ0 103 aa11.08□□□□□ -0.64
PRKCA-201ENST00000284384 NEFLP07196 543 aa11.08□□□□□ -0.64
PRKCA-201ENST00000284384 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.08□□□□□ -0.64
PRKCA-201ENST00000284384 KIAA1107Q9UPP5 1409 aa11.08□□□□□ -0.64
PRKCA-201ENST00000284384 ANKRD50Q9ULJ7 1429 aa11.07□□□□□ -0.64
PRKCA-201ENST00000284384 RAD21O60216 631 aa11.06□□□□□ -0.64
PRKCA-201ENST00000284384 KCTD17Q8N5Z5 321 aa11.06□□□□□ -0.64
PRKCA-201ENST00000284384 ARID3CA6NKF2 412 aa11.05□□□□□ -0.64
PRKCA-201ENST00000284384 IQGAP3Q86VI3 1631 aa11.04□□□□□ -0.64
PRKCA-201ENST00000284384 CHIC2Q9UKJ5 165 aa11.04□□□□□ -0.64
PRKCA-201ENST00000284384 MAGI2Q86UL8 1455 aa11.04□□□□□ -0.64
PRKCA-201ENST00000284384 CCER2I3L3R5 266 aa11.03□□□□□ -0.64
PRKCA-201ENST00000284384 ZNF644Q9H582 1327 aaPredicted RBP11.03□□□□□ -0.64
PRKCA-201ENST00000284384 TRIM52Q96A61 297 aa11.03□□□□□ -0.64
PRKCA-201ENST00000284384 VASPP50552 380 aaPredicted RBP11.02□□□□□ -0.64
PRKCA-201ENST00000284384 ARHGAP5Q13017 1502 aa11.02□□□□□ -0.65
PRKCA-201ENST00000284384 SYCP2Q9BX26 1530 aa11.02□□□□□ -0.65
PRKCA-201ENST00000284384 UHRF1BP1Q6BDS2 1440 aa11.02□□□□□ -0.65
PRKCA-201ENST00000284384 ABCC1P33527 1531 aa11.02□□□□□ -0.65
PRKCA-201ENST00000284384 NEUROD2Q15784 382 aa11.01□□□□□ -0.65
PRKCA-201ENST00000284384 MAP3K4Q9Y6R4 1608 aa11.01□□□□□ -0.65
PRKCA-201ENST00000284384 PPRC1Q5VV67 1664 aaKnown RBP11.01□□□□□ -0.65
PRKCA-201ENST00000284384 DUOX2Q9NRD8 1548 aa11.01□□□□□ -0.65
PRKCA-201ENST00000284384 RGS22Q8NE09 1264 aa11□□□□□ -0.65
PRKCA-201ENST00000284384 LAMC1P11047 1609 aa11□□□□□ -0.65
PRKCA-201ENST00000284384 ERBINQ96RT1 1412 aa11□□□□□ -0.65
PRKCA-201ENST00000284384 BCL11BQ9C0K0 894 aaPredicted RBP11□□□□□ -0.65
PRKCA-201ENST00000284384 MTMR7Q9Y216 660 aa11□□□□□ -0.65
PRKCA-201ENST00000284384 KIF15Q9NS87 1388 aa10.99□□□□□ -0.65
PRKCA-201ENST00000284384 FAM135AQ9P2D6 1515 aa10.99□□□□□ -0.65
PRKCA-201ENST00000284384 ABCA9Q8IUA7 1624 aa10.99□□□□□ -0.65
PRKCA-201ENST00000284384 SPATA31E1Q6ZUB1 1445 aa10.99□□□□□ -0.65
PRKCA-201ENST00000284384 PLCH2O75038 1416 aa10.98□□□□□ -0.65
PRKCA-201ENST00000284384 RALGAPBQ86X10 1494 aa10.98□□□□□ -0.65
PRKCA-201ENST00000284384 WDR7Q9Y4E6 1490 aa10.98□□□□□ -0.65
PRKCA-201ENST00000284384 KDM5CP41229 1560 aa10.98□□□□□ -0.65
PRKCA-201ENST00000284384 DEPDC5O75140 1603 aa10.97□□□□□ -0.65
PRKCA-201ENST00000284384 TSPY4P0CV99 314 aa10.97□□□□□ -0.65
PRKCA-201ENST00000284384 TSPY10P0CW01 314 aa10.97□□□□□ -0.65
PRKCA-201ENST00000284384 RBM25P49756 843 aaKnown RBP10.97□□□□□ -0.65
PRKCA-201ENST00000284384 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.97□□□□□ -0.65
PRKCA-201ENST00000284384 ATP10AO60312 1499 aa10.97□□□□□ -0.65
PRKCA-201ENST00000284384 EIF2AK4Q9P2K8 1649 aaKnown RBP10.97□□□□□ -0.65
PRKCA-201ENST00000284384 EIF4G2P78344 907 aaKnown RBP eCLIP10.96□□□□□ -0.653e-7■■■■□ 22
PRKCA-201ENST00000284384 CNTLNQ9NXG0 1405 aa10.96□□□□□ -0.65
PRKCA-201ENST00000284384 FOXD4L5Q5VV16 416 aaPredicted RBP10.96□□□□□ -0.66
PRKCA-201ENST00000284384 FOXD4L4Q8WXT5 416 aaPredicted RBP10.96□□□□□ -0.66
PRKCA-201ENST00000284384 RTEL1-TNFRSF6BF6WH68 1400 aa10.96□□□□□ -0.66
PRKCA-201ENST00000284384 CFAP74Q9C0B2 1584 aa10.95□□□□□ -0.66
PRKCA-201ENST00000284384 RBM19Q9Y4C8 960 aaKnown RBP10.95□□□□□ -0.66
PRKCA-201ENST00000284384 ARID4BQ4LE39 1312 aaPredicted RBP10.95□□□□□ -0.66
PRKCA-201ENST00000284384 ANP32CO43423 234 aa10.95□□□□□ -0.66
PRKCA-201ENST00000284384 L3MBTL2Q969R5 705 aa10.95□□□□□ -0.66
PRKCA-201ENST00000284384 NEURL4Q96JN8 1562 aa10.95□□□□□ -0.66
PRKCA-201ENST00000284384 INO80Q9ULG1 1556 aaPredicted RBP10.94□□□□□ -0.66
PRKCA-201ENST00000284384 ZFYVE16Q7Z3T8 1539 aa10.93□□□□□ -0.66
PRKCA-201ENST00000284384 TRPM1Q7Z4N2 1603 aa10.93□□□□□ -0.66
PRKCA-201ENST00000284384 FAM69CQ0P6D2 419 aa10.93□□□□□ -0.66
PRKCA-201ENST00000284384 DDX10Q13206 875 aaKnown RBP10.93□□□□□ -0.66
PRKCA-201ENST00000284384 ASXL2Q76L83 1435 aa10.92□□□□□ -0.66
PRKCA-201ENST00000284384 ATXN8OSP0DMR3 200 aa10.92□□□□□ -0.66
PRKCA-201ENST00000284384 ZNF777Q9ULD5 760 aaPredicted RBP10.92□□□□□ -0.66
PRKCA-201ENST00000284384 NUP155O75694 1391 aa10.92□□□□□ -0.66
PRKCA-201ENST00000284384 APBB1O00213 710 aa10.92□□□□□ -0.66
PRKCA-201ENST00000284384 PKNOX2Q96KN3 472 aa10.92□□□□□ -0.66
PRKCA-201ENST00000284384 ECM2O94769 699 aaPredicted RBP10.91□□□□□ -0.66
PRKCA-201ENST00000284384 TSPOAP1O95153 1857 aa10.91□□□□□ -0.66
PRKCA-201ENST00000284384 E9PCH4 1651 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms