RNA–Protein interactions for RNA: ENST00000284041.7

SREK1-201, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 3,751 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-201ENST00000284041 MICALL2Q8IY33 904 aa6.42□□□□□ -1.38
SREK1-201ENST00000284041 MS4A3Q96HJ5 214 aa6.42□□□□□ -1.38
SREK1-201ENST00000284041 LIMD1Q9UGP4 676 aa6.42□□□□□ -1.38
SREK1-201ENST00000284041 FLIIQ13045 1269 aa6.42□□□□□ -1.38
SREK1-201ENST00000284041 UPF1Q92900 1129 aaKnown RBP eCLIP6.42□□□□□ -1.38
SREK1-201ENST00000284041 ZBTB7CA1YPR0 619 aa6.41□□□□□ -1.38
SREK1-201ENST00000284041 MYSM1Q5VVJ2 828 aa6.41□□□□□ -1.38
SREK1-201ENST00000284041 TMEM106CQ9BVX2 250 aa6.41□□□□□ -1.38
SREK1-201ENST00000284041 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.4□□□□□ -1.38
SREK1-201ENST00000284041 GDPD2Q9HCC8 539 aa6.4□□□□□ -1.38
SREK1-201ENST00000284041 RBM25P49756 843 aaKnown RBP6.4□□□□□ -1.39
SREK1-201ENST00000284041 PLPP6Q8IY26 295 aa6.4□□□□□ -1.39
SREK1-201ENST00000284041 TTLL13PA6NNM8 815 aa6.39□□□□□ -1.39
SREK1-201ENST00000284041 MDM2Q00987 491 aaPredicted RBP6.39□□□□□ -1.39
SREK1-201ENST00000284041 QPCTQ16769 361 aa6.39□□□□□ -1.39
SREK1-201ENST00000284041 SH3D19Q5HYK7 790 aa6.39□□□□□ -1.39
SREK1-201ENST00000284041 FXR2P51116 673 aaKnown RBP eCLIP6.38□□□□□ -1.395e-7■■□□□ 12.1
SREK1-201ENST00000284041 CACNB1Q02641 598 aaPredicted RBP6.37□□□□□ -1.39
SREK1-201ENST00000284041 HIC1Q14526 733 aa6.37□□□□□ -1.39
SREK1-201ENST00000284041 CFAP70Q5T0N1 1121 aa6.37□□□□□ -1.39
SREK1-201ENST00000284041 BEGAINQ9BUH8 593 aa6.37□□□□□ -1.39
SREK1-201ENST00000284041 TMEM121BQ9BXQ6 578 aaPredicted RBP6.37□□□□□ -1.39
SREK1-201ENST00000284041 TBC1D2BQ9UPU7 963 aa6.37□□□□□ -1.39
SREK1-201ENST00000284041 HMX1Q9NP08 348 aaPredicted RBP6.36□□□□□ -1.39
SREK1-201ENST00000284041 BMP2KQ9NSY1 1161 aaPredicted RBP6.36□□□□□ -1.39
SREK1-201ENST00000284041 SCNN1AP37088 669 aa6.36□□□□□ -1.39
SREK1-201ENST00000284041 FAM217BQ9NTX9 383 aaPredicted RBP6.36□□□□□ -1.39
SREK1-201ENST00000284041 SLAIN2Q9P270 581 aa6.35□□□□□ -1.39
SREK1-201ENST00000284041 UCN2Q96RP3 112 aa6.35□□□□□ -1.39
SREK1-201ENST00000284041 GLMNQ92990 594 aa6.35□□□□□ -1.39
SREK1-201ENST00000284041 IGSF5Q9NSI5 407 aa6.35□□□□□ -1.39
SREK1-201ENST00000284041 SSTR3P32745 418 aaPredicted RBP6.34□□□□□ -1.39
SREK1-201ENST00000284041 RFC5P40937 340 aa6.34□□□□□ -1.39
SREK1-201ENST00000284041 GJD4Q96KN9 370 aaPredicted RBP6.34□□□□□ -1.39
SREK1-201ENST00000284041 PTGER2P43116 358 aa6.34□□□□□ -1.39
SREK1-201ENST00000284041 TBC1D12O60347 775 aa6.34□□□□□ -1.4
SREK1-201ENST00000284041 EPS8L1Q8TE68 723 aa6.33□□□□□ -1.4
SREK1-201ENST00000284041 METTL3Q86U44 580 aaKnown RBP6.33□□□□□ -1.4
SREK1-201ENST00000284041 EVX2Q03828 476 aa6.33□□□□□ -1.4
SREK1-201ENST00000284041 SKIV2LQ15477 1246 aaKnown RBP6.33□□□□□ -1.4
SREK1-201ENST00000284041 PIP4P2Q8N4L2 257 aa6.33□□□□□ -1.4
SREK1-201ENST00000284041 POTEFA5A3E0 1075 aa6.32□□□□□ -1.4
SREK1-201ENST00000284041 TMEM88BA6NKF7 163 aa6.32□□□□□ -1.4
SREK1-201ENST00000284041 GALR2O43603 387 aaPredicted RBP6.32□□□□□ -1.4
SREK1-201ENST00000284041 HLA-CQ95604 372 aa6.31□□□□□ -1.4
SREK1-201ENST00000284041 FAM198AQ9UFP1 575 aa6.31□□□□□ -1.4
SREK1-201ENST00000284041 PHLDB3Q6NSJ2 640 aa6.31□□□□□ -1.4
SREK1-201ENST00000284041 PCDHB15Q9Y5E8 787 aa6.31□□□□□ -1.4
SREK1-201ENST00000284041 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.31□□□□□ -1.45e-7■■■□□ 16.2
SREK1-201ENST00000284041 TRIM35Q9UPQ4 493 aa6.31□□□□□ -1.4
SREK1-201ENST00000284041 KIAA1522Q9P206 1035 aaPredicted RBP6.3□□□□□ -1.4
SREK1-201ENST00000284041 KDM4FA0A1W2PPD8 638 aa6.3□□□□□ -1.4
SREK1-201ENST00000284041 ZNF330Q9Y3S2 320 aaPredicted RBP6.3□□□□□ -1.4
SREK1-201ENST00000284041 SPDYE16A6NNV3 312 aaPredicted RBP6.29□□□□□ -1.4
SREK1-201ENST00000284041 FCHSD2O94868 740 aa6.29□□□□□ -1.4
SREK1-201ENST00000284041 GPCPD1Q9NPB8 672 aa6.29□□□□□ -1.4
SREK1-201ENST00000284041 TMCO4Q5TGY1 634 aa6.29□□□□□ -1.4
SREK1-201ENST00000284041 IRX5P78411 483 aaPredicted RBP6.29□□□□□ -1.4
SREK1-201ENST00000284041 ZRANB1Q9UGI0 708 aa6.28□□□□□ -1.4
SREK1-201ENST00000284041 PCDHGA10Q9Y5H3 936 aa6.28□□□□□ -1.4
SREK1-201ENST00000284041 RTL5Q5HYW3 569 aaPredicted RBP6.28□□□□□ -1.4
SREK1-201ENST00000284041 PCMTD1Q96MG8 357 aaPredicted RBP6.28□□□□□ -1.4
SREK1-201ENST00000284041 RFX1P22670 979 aa6.28□□□□□ -1.4
SREK1-201ENST00000284041 TBC1D2Q9BYX2 928 aa6.27□□□□□ -1.41
SREK1-201ENST00000284041 SERPINA10Q9UK55 444 aa6.27□□□□□ -1.41
SREK1-201ENST00000284041 SPDYE5A6NIY4 337 aa6.27□□□□□ -1.41
SREK1-201ENST00000284041 EVI5O60447 810 aa6.27□□□□□ -1.41
SREK1-201ENST00000284041 TXNDC2Q86VQ3 553 aa6.27□□□□□ -1.41
SREK1-201ENST00000284041 TRIM34Q9BYJ4 488 aa6.27□□□□□ -1.41
SREK1-201ENST00000284041 EN1Q05925 392 aaPredicted RBP6.26□□□□□ -1.41
SREK1-201ENST00000284041 ATN1P54259 1190 aaPredicted RBP6.26□□□□□ -1.41
SREK1-201ENST00000284041 NDUFV2P19404 249 aa6.26□□□□□ -1.41
SREK1-201ENST00000284041 PXYLP1Q8TE99 480 aa6.26□□□□□ -1.41
SREK1-201ENST00000284041 RBM33Q96EV2 1170 aaKnown RBP6.25□□□□□ -1.41
SREK1-201ENST00000284041 COLQQ9Y215 455 aaPredicted RBP6.25□□□□□ -1.41
SREK1-201ENST00000284041 CD44P16070 742 aaKnown RBP6.24□□□□□ -1.41
SREK1-201ENST00000284041 RBM42Q9BTD8 480 aaKnown RBP6.24□□□□□ -1.41
SREK1-201ENST00000284041 CLK2P49760 499 aaKnown RBP6.24□□□□□ -1.41
SREK1-201ENST00000284041 MAP3K9P80192 1104 aa6.24□□□□□ -1.41
SREK1-201ENST00000284041 TAGLNQ01995 201 aaKnown RBP6.24□□□□□ -1.41
SREK1-201ENST00000284041 PADI6Q6TGC4 694 aa6.24□□□□□ -1.41
SREK1-201ENST00000284041 PPP2R2DQ66LE6 453 aa6.23□□□□□ -1.41
SREK1-201ENST00000284041 CABLES1Q8TDN4 633 aa6.23□□□□□ -1.41
SREK1-201ENST00000284041 SPIRE2Q8WWL2 714 aa6.23□□□□□ -1.41
SREK1-201ENST00000284041 ADGRG1Q9Y653 693 aa6.23□□□□□ -1.41
SREK1-201ENST00000284041 IVNS1ABPQ9Y6Y0 642 aa6.23□□□□□ -1.41
SREK1-201ENST00000284041 GUCA2AQ02747 115 aa6.23□□□□□ -1.41
SREK1-201ENST00000284041 CSPP1Q1MSJ5 1256 aa6.23□□□□□ -1.41
SREK1-201ENST00000284041 ABL2P42684 1182 aa6.22□□□□□ -1.41
SREK1-201ENST00000284041 MOXD2PA6NHM9 499 aa6.22□□□□□ -1.41
SREK1-201ENST00000284041 CDCA8Q53HL2 280 aa6.22□□□□□ -1.41
SREK1-201ENST00000284041 CCDC97Q96F63 343 aaPredicted RBP6.22□□□□□ -1.41
SREK1-201ENST00000284041 ANO8Q9HCE9 1232 aaPredicted RBP6.22□□□□□ -1.41
SREK1-201ENST00000284041 ZMIZ1Q9ULJ6 1067 aa6.21□□□□□ -1.41
SREK1-201ENST00000284041 PCDHGC3Q9UN70 934 aa6.21□□□□□ -1.42
SREK1-201ENST00000284041 DNAJC14Q6Y2X3 702 aaPredicted RBP6.21□□□□□ -1.42
SREK1-201ENST00000284041 TTC13Q8NBP0 860 aa6.2□□□□□ -1.42
SREK1-201ENST00000284041 PRR7Q8TB68 274 aa6.2□□□□□ -1.42
SREK1-201ENST00000284041 KHSRPQ92945 711 aaKnown RBP eCLIP6.2□□□□□ -1.425e-10■■□□□ 13.6
SREK1-201ENST00000284041 VAC14Q08AM6 782 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms