RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 AKAP17AQ02040 695 aaKnown RBP5.05□□□□□ -1.6
SCN3A-201ENST00000283254 TTC5Q8N0Z6 440 aa5.05□□□□□ -1.6
SCN3A-201ENST00000283254 MIER1Q8N108 512 aa5.05□□□□□ -1.6
SCN3A-201ENST00000283254 TOMM22Q9NS69 142 aa5.05□□□□□ -1.6
SCN3A-201ENST00000283254 WASHC2CQ9Y4E1 1318 aa5.04□□□□□ -1.6
SCN3A-201ENST00000283254 AMPHP49418 695 aa5.04□□□□□ -1.6
SCN3A-201ENST00000283254 SETD5Q9C0A6 1442 aa5.04□□□□□ -1.6
SCN3A-201ENST00000283254 ST18O60284 1047 aa5.04□□□□□ -1.6
SCN3A-201ENST00000283254 NGEFQ8N5V2 710 aa5.04□□□□□ -1.6
SCN3A-201ENST00000283254 VPS8Q8N3P4 1428 aa5.04□□□□□ -1.6
SCN3A-201ENST00000283254 ANKRD20A12PQ8NF67 263 aa5.04□□□□□ -1.6
SCN3A-201ENST00000283254 PMFBP1Q8TBY8 1022 aa5.04□□□□□ -1.6
SCN3A-201ENST00000283254 PDE3BQ13370 1112 aa5.04□□□□□ -1.6
SCN3A-201ENST00000283254 HIRIP3Q9BW71 556 aaPredicted RBP5.04□□□□□ -1.6
SCN3A-201ENST00000283254 CNKSR2Q8WXI2 1034 aa5.03□□□□□ -1.6
SCN3A-201ENST00000283254 STK26Q9P289 416 aa5.03□□□□□ -1.6
SCN3A-201ENST00000283254 CGNL1Q0VF96 1302 aa5.03□□□□□ -1.6
SCN3A-201ENST00000283254 SYNE3Q6ZMZ3 975 aa5.03□□□□□ -1.6
SCN3A-201ENST00000283254 CCDC47Q96A33 483 aaKnown RBP5.03□□□□□ -1.6
SCN3A-201ENST00000283254 CCDC43Q96MW1 224 aaKnown RBP5.03□□□□□ -1.6
SCN3A-201ENST00000283254 RDXP35241 583 aaKnown RBP5.03□□□□□ -1.6
SCN3A-201ENST00000283254 NLRP13Q86W25 1043 aa5.03□□□□□ -1.6
SCN3A-201ENST00000283254 ROCK1Q13464 1354 aa5.02□□□□□ -1.61
SCN3A-201ENST00000283254 C1orf141Q5JVX7 400 aa5.02□□□□□ -1.61
SCN3A-201ENST00000283254 CCDC144AA2RUR9 1427 aa5.02□□□□□ -1.61
SCN3A-201ENST00000283254 CWC22Q9HCG8 908 aaKnown RBP5.02□□□□□ -1.61
SCN3A-201ENST00000283254 SUPT16HQ9Y5B9 1047 aaKnown RBP5.02□□□□□ -1.61
SCN3A-201ENST00000283254 TRIM6-TRIM34B2RNG4 842 aa5.02□□□□□ -1.61
SCN3A-201ENST00000283254 APBB1O00213 710 aa5.02□□□□□ -1.61
SCN3A-201ENST00000283254 VGFO15240 615 aaPredicted RBP5.02□□□□□ -1.61
SCN3A-201ENST00000283254 HOOK1Q9UJC3 728 aaKnown RBP5.02□□□□□ -1.61
SCN3A-201ENST00000283254 CENPJQ9HC77 1338 aaPredicted RBP5.01□□□□□ -1.61
SCN3A-201ENST00000283254 KIF3BO15066 747 aa5.01□□□□□ -1.61
SCN3A-201ENST00000283254 RUFY2Q8WXA3 655 aa5.01□□□□□ -1.61
SCN3A-201ENST00000283254 TEFQ10587 303 aa5.01□□□□□ -1.61
SCN3A-201ENST00000283254 SF3A1Q15459 793 aaKnown RBP5.01□□□□□ -1.61
SCN3A-201ENST00000283254 ZKSCAN1P17029 563 aaPredicted RBP5.01□□□□□ -1.61
SCN3A-201ENST00000283254 COG3Q96JB2 828 aa5.01□□□□□ -1.61
SCN3A-201ENST00000283254 GPS2Q13227 327 aa5.01□□□□□ -1.61
SCN3A-201ENST00000283254 STAC3Q96MF2 364 aa5.01□□□□□ -1.61
SCN3A-201ENST00000283254 REC8O95072 547 aa5□□□□□ -1.61
SCN3A-201ENST00000283254 R3HCC1Q9Y3T6 440 aaKnown RBP5□□□□□ -1.61
SCN3A-201ENST00000283254 MEX3CQ5U5Q3 659 aaKnown RBP5□□□□□ -1.61
SCN3A-201ENST00000283254 DIAPH3Q9NSV4 1193 aa5□□□□□ -1.61
SCN3A-201ENST00000283254 EVC2Q86UK5 1308 aa5□□□□□ -1.61
SCN3A-201ENST00000283254 DDX58O95786 925 aaKnown RBP5□□□□□ -1.61
SCN3A-201ENST00000283254 CDR1P51861 262 aa5□□□□□ -1.61
SCN3A-201ENST00000283254 VPS37DQ86XT2 251 aa5□□□□□ -1.61
SCN3A-201ENST00000283254 TPD52L1Q16890 204 aaPredicted RBP5□□□□□ -1.61
SCN3A-201ENST00000283254 RCAN3Q9UKA8 241 aa5□□□□□ -1.61
SCN3A-201ENST00000283254 CPLX1O14810 134 aa5□□□□□ -1.61
SCN3A-201ENST00000283254 TNNT3P45378 269 aaPredicted RBP4.99□□□□□ -1.61
SCN3A-201ENST00000283254 SETQ01105 290 aaPredicted RBP4.99□□□□□ -1.61
SCN3A-201ENST00000283254 TRIM29Q14134 588 aa4.99□□□□□ -1.61
SCN3A-201ENST00000283254 DDX11L8A8MPP1 907 aa4.99□□□□□ -1.61
SCN3A-201ENST00000283254 H3BQV1 296 aa4.99□□□□□ -1.61
SCN3A-201ENST00000283254 ABCC8Q09428 1581 aa4.99□□□□□ -1.61
SCN3A-201ENST00000283254 HSP90AB4PQ58FF6 505 aa4.99□□□□□ -1.61
SCN3A-201ENST00000283254 IFFO2Q5TF58 517 aa4.99□□□□□ -1.61
SCN3A-201ENST00000283254 RNF20Q5VTR2 975 aa4.99□□□□□ -1.61
SCN3A-201ENST00000283254 SOGA1O94964 1423 aa4.99□□□□□ -1.61
SCN3A-201ENST00000283254 MIA2Q96PC5 1412 aa4.99□□□□□ -1.61
SCN3A-201ENST00000283254 MSH5O43196 834 aa4.99□□□□□ -1.61
SCN3A-201ENST00000283254 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.99□□□□□ -1.61
SCN3A-201ENST00000283254 UNC13AQ9UPW8 1703 aa4.99□□□□□ -1.61
SCN3A-201ENST00000283254 TRDNQ13061 729 aa4.99□□□□□ -1.61
SCN3A-201ENST00000283254 EVA1CP58658 441 aa4.98□□□□□ -1.61
SCN3A-201ENST00000283254 AAMPQ13685 434 aa4.98□□□□□ -1.61
SCN3A-201ENST00000283254 PES1O00541 588 aaKnown RBP4.98□□□□□ -1.61
SCN3A-201ENST00000283254 KIF15Q9NS87 1388 aa4.98□□□□□ -1.61
SCN3A-201ENST00000283254 BECN2A8MW95 431 aa4.98□□□□□ -1.61
SCN3A-201ENST00000283254 DHX16O60231 1041 aaKnown RBP4.98□□□□□ -1.61
SCN3A-201ENST00000283254 RBM33Q96EV2 1170 aaKnown RBP4.98□□□□□ -1.61
SCN3A-201ENST00000283254 SLC4A10Q6U841 1118 aa4.98□□□□□ -1.61
SCN3A-201ENST00000283254 C9orf78Q9NZ63 289 aaPredicted RBP4.98□□□□□ -1.61
SCN3A-201ENST00000283254 SAFBQ15424 915 aaKnown RBP eCLIP4.97□□□□□ -1.61
SCN3A-201ENST00000283254 FAM184AQ8NB25 1140 aa4.97□□□□□ -1.61
SCN3A-201ENST00000283254 GOLGA6L19H0YKK7 550 aa4.97□□□□□ -1.61
SCN3A-201ENST00000283254 CT47A1Q5JQC4 288 aaPredicted RBP4.97□□□□□ -1.61
SCN3A-201ENST00000283254 GOLGA6L3A6NEY3 463 aa4.97□□□□□ -1.61
SCN3A-201ENST00000283254 SKOR2Q2VWA4 1001 aaPredicted RBP4.97□□□□□ -1.61
SCN3A-201ENST00000283254 BRMS1Q9HCU9 246 aa4.97□□□□□ -1.61
SCN3A-201ENST00000283254 MFAP1P55081 439 aaKnown RBP4.97□□□□□ -1.61
SCN3A-201ENST00000283254 ERICH2A1L162 156 aa4.97□□□□□ -1.61
SCN3A-201ENST00000283254 HSPA5P11021 654 aaKnown RBP4.97□□□□□ -1.61
SCN3A-201ENST00000283254 PDE4CQ08493 712 aa4.97□□□□□ -1.61
SCN3A-201ENST00000283254 API5Q9BZZ5 524 aaKnown RBP4.97□□□□□ -1.61
SCN3A-201ENST00000283254 SIN3AQ96ST3 1273 aa4.96□□□□□ -1.61
SCN3A-201ENST00000283254 RAPGEF2Q9Y4G8 1499 aa4.96□□□□□ -1.62
SCN3A-201ENST00000283254 ERC2O15083 957 aa4.96□□□□□ -1.62
SCN3A-201ENST00000283254 CREBRFQ8IUR6 639 aa4.96□□□□□ -1.62
SCN3A-201ENST00000283254 PTPRGP23470 1445 aa4.96□□□□□ -1.62
SCN3A-201ENST00000283254 CCDC173Q0VFZ6 552 aa4.96□□□□□ -1.62
SCN3A-201ENST00000283254 ODF2Q5BJF6 829 aa4.96□□□□□ -1.62
SCN3A-201ENST00000283254 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.96□□□□□ -1.62
SCN3A-201ENST00000283254 SART3Q15020 963 aaKnown RBP4.96□□□□□ -1.62
SCN3A-201ENST00000283254 ZKSCAN2Q63HK3 967 aa4.96□□□□□ -1.62
SCN3A-201ENST00000283254 RAPGEF4Q8WZA2 1011 aa4.96□□□□□ -1.62
SCN3A-201ENST00000283254 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.96□□□□□ -1.62
SCN3A-201ENST00000283254 XBP1P17861 261 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms