RNA–Protein interactions for RNA: ENST00000282878.5

RAB3C-201, Transcript of RAB3C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3C, Length 8,896 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3C-201ENST00000282878 IFT140Q96RY7 1462 aa4.95□□□□□ -1.62
RAB3C-201ENST00000282878 PANK3Q9H999 370 aa4.95□□□□□ -1.62
RAB3C-201ENST00000282878 GRIN2AQ12879 1464 aa4.95□□□□□ -1.62
RAB3C-201ENST00000282878 RAD21O60216 631 aa4.95□□□□□ -1.62
RAB3C-201ENST00000282878 THOC2Q8NI27 1593 aaKnown RBP4.95□□□□□ -1.62
RAB3C-201ENST00000282878 BCCIPQ9P287 314 aaKnown RBP eCLIP4.95□□□□□ -1.62
RAB3C-201ENST00000282878 RRP7AQ9Y3A4 280 aaKnown RBP4.95□□□□□ -1.62
RAB3C-201ENST00000282878 CCDC7Q96M83 1385 aa4.95□□□□□ -1.62
RAB3C-201ENST00000282878 RSPH6AQ9H0K4 717 aa4.95□□□□□ -1.62
RAB3C-201ENST00000282878 FYCO1Q9BQS8 1478 aa4.94□□□□□ -1.62
RAB3C-201ENST00000282878 CARMIL2Q6F5E8 1435 aa4.94□□□□□ -1.62
RAB3C-201ENST00000282878 NCLP19338 710 aaKnown RBP4.94□□□□□ -1.62
RAB3C-201ENST00000282878 ANKRD50Q9ULJ7 1429 aa4.94□□□□□ -1.62
RAB3C-201ENST00000282878 ANKRD30BQ9BXX2 1392 aa4.94□□□□□ -1.62
RAB3C-201ENST00000282878 ANKRD30AQ9BXX3 1397 aa4.94□□□□□ -1.62
RAB3C-201ENST00000282878 NPM3O75607 178 aaKnown RBP4.94□□□□□ -1.62
RAB3C-201ENST00000282878 KIAA0586Q9BVV6 1533 aa4.94□□□□□ -1.62
RAB3C-201ENST00000282878 SOX12O15370 315 aa4.94□□□□□ -1.62
RAB3C-201ENST00000282878 NPM1P06748 294 aaKnown RBP eCLIP4.94□□□□□ -1.62
RAB3C-201ENST00000282878 KIF15Q9NS87 1388 aa4.94□□□□□ -1.62
RAB3C-201ENST00000282878 KDM6BO15054 1643 aa4.94□□□□□ -1.62
RAB3C-201ENST00000282878 KCTD17Q8N5Z5 321 aa4.94□□□□□ -1.62
RAB3C-201ENST00000282878 EFCAB2Q5VUJ9 269 aa4.93□□□□□ -1.62
RAB3C-201ENST00000282878 FBXO31Q5XUX0 539 aaPredicted RBP4.93□□□□□ -1.62
RAB3C-201ENST00000282878 ATP10BO94823 1461 aa4.93□□□□□ -1.62
RAB3C-201ENST00000282878 RBM33Q96EV2 1170 aaKnown RBP4.93□□□□□ -1.62
RAB3C-201ENST00000282878 SPAG9O60271 1321 aaKnown RBP4.93□□□□□ -1.62
RAB3C-201ENST00000282878 TARBP1Q13395 1621 aaKnown RBP4.93□□□□□ -1.62
RAB3C-201ENST00000282878 EXOC6Q8TAG9 804 aa4.93□□□□□ -1.62
RAB3C-201ENST00000282878 TROQ12816 1431 aaPredicted RBP4.92□□□□□ -1.62
RAB3C-201ENST00000282878 USP47Q96K76 1375 aa4.92□□□□□ -1.62
RAB3C-201ENST00000282878 ADGRF5Q8IZF2 1346 aa4.92□□□□□ -1.62
RAB3C-201ENST00000282878 WDR62O43379 1518 aa4.92□□□□□ -1.62
RAB3C-201ENST00000282878 ROCK2O75116 1388 aaKnown RBP4.92□□□□□ -1.62
RAB3C-201ENST00000282878 ECM2O94769 699 aaPredicted RBP4.92□□□□□ -1.62
RAB3C-201ENST00000282878 SCAPERQ9BY12 1400 aa4.92□□□□□ -1.62
RAB3C-201ENST00000282878 TRAPPC8Q9Y2L5 1435 aa4.91□□□□□ -1.62
RAB3C-201ENST00000282878 CCER2I3L3R5 266 aa4.91□□□□□ -1.62
RAB3C-201ENST00000282878 E9PSI1 815 aa4.91□□□□□ -1.62
RAB3C-201ENST00000282878 RBM19Q9Y4C8 960 aaKnown RBP4.91□□□□□ -1.62
RAB3C-201ENST00000282878 PLEKHH2Q8IVE3 1493 aa4.91□□□□□ -1.62
RAB3C-201ENST00000282878 GPATCH8Q9UKJ3 1502 aaKnown RBP4.91□□□□□ -1.62
RAB3C-201ENST00000282878 ZBTB22O15209 634 aa4.91□□□□□ -1.62
RAB3C-201ENST00000282878 ERCC6L2Q5T890 1561 aa4.91□□□□□ -1.62
RAB3C-201ENST00000282878 NCKAP5LQ9HCH0 1330 aa4.91□□□□□ -1.62
RAB3C-201ENST00000282878 TNNQ9UQP3 1299 aa4.91□□□□□ -1.62
RAB3C-201ENST00000282878 NCOA1Q15788 1441 aa4.9□□□□□ -1.62
RAB3C-201ENST00000282878 TCERG1O14776 1098 aaKnown RBP4.9□□□□□ -1.62
RAB3C-201ENST00000282878 BCL2L13Q9BXK5 485 aa4.9□□□□□ -1.62
RAB3C-201ENST00000282878 CABP2Q9NPB3 220 aa4.9□□□□□ -1.62
RAB3C-201ENST00000282878 DMRT2Q9Y5R5 561 aa4.9□□□□□ -1.63
RAB3C-201ENST00000282878 AKNAQ7Z591 1439 aa4.89□□□□□ -1.63
RAB3C-201ENST00000282878 APBB1O00213 710 aa4.89□□□□□ -1.63
RAB3C-201ENST00000282878 C20orf194Q5TEA3 1177 aa4.89□□□□□ -1.63
RAB3C-201ENST00000282878 DISP3Q9P2K9 1392 aa4.89□□□□□ -1.63
RAB3C-201ENST00000282878 CEBPAP49715 358 aaPredicted RBP4.89□□□□□ -1.63
RAB3C-201ENST00000282878 TMCO4Q5TGY1 634 aa4.89□□□□□ -1.63
RAB3C-201ENST00000282878 CNKSR2Q8WXI2 1034 aa4.89□□□□□ -1.63
RAB3C-201ENST00000282878 ADAMTS8Q9UP79 889 aa4.89□□□□□ -1.63
RAB3C-201ENST00000282878 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.89□□□□□ -1.63
RAB3C-201ENST00000282878 OSCARQ8IYS5 282 aa4.89□□□□□ -1.63
RAB3C-201ENST00000282878 STAG3Q9UJ98 1225 aa4.89□□□□□ -1.63
RAB3C-201ENST00000282878 SLC4A3P48751 1232 aa4.89□□□□□ -1.63
RAB3C-201ENST00000282878 SLC12A5Q9H2X9 1139 aa4.89□□□□□ -1.63
RAB3C-201ENST00000282878 CAMSAP2Q08AD1 1489 aa4.89□□□□□ -1.63
RAB3C-201ENST00000282878 C9orf84Q5VXU9 1444 aa4.89□□□□□ -1.63
RAB3C-201ENST00000282878 PRDM2Q13029 1718 aa4.89□□□□□ -1.63
RAB3C-201ENST00000282878 SYNJ2O15056 1496 aa4.89□□□□□ -1.63
RAB3C-201ENST00000282878 ABCA5Q8WWZ7 1642 aa4.89□□□□□ -1.63
RAB3C-201ENST00000282878 FAM69CQ0P6D2 419 aa4.88□□□□□ -1.63
RAB3C-201ENST00000282878 MINK1Q8N4C8 1332 aaPredicted RBP4.88□□□□□ -1.63
RAB3C-201ENST00000282878 MSH5O43196 834 aa4.88□□□□□ -1.63
RAB3C-201ENST00000282878 DHX37Q8IY37 1157 aaKnown RBP4.88□□□□□ -1.63
RAB3C-201ENST00000282878 FBXW7Q969H0 707 aa4.88□□□□□ -1.63
RAB3C-201ENST00000282878 PUS7Q96PZ0 661 aaKnown RBP4.88□□□□□ -1.63
RAB3C-201ENST00000282878 GGNBP2Q9H3C7 697 aa4.88□□□□□ -1.63
RAB3C-201ENST00000282878 ZNF428Q96B54 188 aa4.88□□□□□ -1.63
RAB3C-201ENST00000282878 CCDC136Q96JN2 1154 aa4.88□□□□□ -1.63
RAB3C-201ENST00000282878 NUP160Q12769 1436 aa4.88□□□□□ -1.63
RAB3C-201ENST00000282878 PZPP20742 1482 aa4.88□□□□□ -1.63
RAB3C-201ENST00000282878 SPINK5Q9NQ38 1064 aaPredicted RBP4.87□□□□□ -1.63
RAB3C-201ENST00000282878 ZRANB1Q9UGI0 708 aa4.87□□□□□ -1.63
RAB3C-201ENST00000282878 UGGT2Q9NYU1 1516 aa4.87□□□□□ -1.63
RAB3C-201ENST00000282878 CNTLNQ9NXG0 1405 aa4.87□□□□□ -1.63
RAB3C-201ENST00000282878 CLUAP1Q96AJ1 413 aa4.87□□□□□ -1.63
RAB3C-201ENST00000282878 WASHC2CQ9Y4E1 1318 aa4.87□□□□□ -1.63
RAB3C-201ENST00000282878 APAF1O14727 1248 aa4.87□□□□□ -1.63
RAB3C-201ENST00000282878 KIAA1107Q9UPP5 1409 aa4.87□□□□□ -1.63
RAB3C-201ENST00000282878 MAGI1Q96QZ7 1491 aaPredicted RBP4.87□□□□□ -1.63
RAB3C-201ENST00000282878 EFCAB5A4FU69 1503 aa4.86□□□□□ -1.63
RAB3C-201ENST00000282878 IQGAP2Q13576 1575 aa4.86□□□□□ -1.63
RAB3C-201ENST00000282878 ELL2O00472 640 aaPredicted RBP4.86□□□□□ -1.63
RAB3C-201ENST00000282878 FRAT1Q92837 279 aaPredicted RBP4.86□□□□□ -1.63
RAB3C-201ENST00000282878 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.86□□□□□ -1.63
RAB3C-201ENST00000282878 PNISRQ8TF01 805 aaKnown RBP4.86□□□□□ -1.63
RAB3C-201ENST00000282878 ARHGEF12Q9NZN5 1544 aa4.86□□□□□ -1.63
RAB3C-201ENST00000282878 CEP170Q5SW79 1584 aa4.86□□□□□ -1.63
RAB3C-201ENST00000282878 MIA2Q96PC5 1412 aa4.86□□□□□ -1.63
RAB3C-201ENST00000282878 PTPN23Q9H3S7 1636 aa4.86□□□□□ -1.63
RAB3C-201ENST00000282878 TRHP20396 242 aaPredicted RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms