RNA–Protein interactions for RNA: ENST00000278426.7

SLC43A1-201, Transcript of solute carrier family 43 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC43A1, Length 2,598 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A1-201ENST00000278426 MAGI1Q96QZ7 1491 aaPredicted RBP24.06■■□□□ 1.44
SLC43A1-201ENST00000278426 EXOC6Q8TAG9 804 aa24.05■■□□□ 1.44
SLC43A1-201ENST00000278426 CDC42BPAQ5VT25 1732 aa24.04■■□□□ 1.44
SLC43A1-201ENST00000278426 SALL2Q9Y467 1007 aaPredicted RBP24.04■■□□□ 1.44
SLC43A1-201ENST00000278426 ATP10BO94823 1461 aa24.03■■□□□ 1.44
SLC43A1-201ENST00000278426 MYBBP1AQ9BQG0 1328 aaKnown RBP24.03■■□□□ 1.44
SLC43A1-201ENST00000278426 ABCC10Q5T3U5 1492 aa24.02■■□□□ 1.44
SLC43A1-201ENST00000278426 RRP1P56182 461 aaKnown RBP24.02■■□□□ 1.44
SLC43A1-201ENST00000278426 ARHGEF12Q9NZN5 1544 aa24.01■■□□□ 1.43
SLC43A1-201ENST00000278426 LRPPRCP42704 1394 aaKnown RBP24■■□□□ 1.43
SLC43A1-201ENST00000278426 RALBP1Q15311 655 aa24■■□□□ 1.43
SLC43A1-201ENST00000278426 SHANK2Q9UPX8 1470 aa23.99■■□□□ 1.43
SLC43A1-201ENST00000278426 BRD4O60885 1362 aaPredicted RBP23.99■■□□□ 1.43
SLC43A1-201ENST00000278426 RGL3Q3MIN7 710 aa23.98■■□□□ 1.43
SLC43A1-201ENST00000278426 ERCC6Q03468 1493 aa23.98■■□□□ 1.43
SLC43A1-201ENST00000278426 NUP160Q12769 1436 aa23.96■■□□□ 1.43
SLC43A1-201ENST00000278426 LAS1LQ9Y4W2 734 aaKnown RBP23.96■■□□□ 1.43
SLC43A1-201ENST00000278426 ABCA8O94911 1581 aa23.95■■□□□ 1.42
SLC43A1-201ENST00000278426 NBPF1Q3BBV0 1214 aa23.95■■□□□ 1.42
SLC43A1-201ENST00000278426 PDE4AP27815 886 aa23.94■■□□□ 1.42
SLC43A1-201ENST00000278426 RCAN3Q9UKA8 241 aa23.94■■□□□ 1.42
SLC43A1-201ENST00000278426 KDM5DQ9BY66 1539 aa23.94■■□□□ 1.42
SLC43A1-201ENST00000278426 PTPRGP23470 1445 aa23.93■■□□□ 1.42
SLC43A1-201ENST00000278426 TCERG1O14776 1098 aaKnown RBP23.92■■□□□ 1.42
SLC43A1-201ENST00000278426 KTN1Q86UP2 1357 aaKnown RBP23.91■■□□□ 1.42
SLC43A1-201ENST00000278426 IL27Q8NEV9 243 aa23.91■■□□□ 1.42
SLC43A1-201ENST00000278426 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.91■■□□□ 1.421e-6■■□□□ 11.4
SLC43A1-201ENST00000278426 NLRP13Q86W25 1043 aa23.9■■□□□ 1.42
SLC43A1-201ENST00000278426 FAM135AQ9P2D6 1515 aa23.88■■□□□ 1.41
SLC43A1-201ENST00000278426 BACH2Q9BYV9 841 aa23.88■■□□□ 1.41
SLC43A1-201ENST00000278426 SKAP1Q86WV1 359 aa23.87■■□□□ 1.41
SLC43A1-201ENST00000278426 CCDC144AA2RUR9 1427 aa23.87■■□□□ 1.41
SLC43A1-201ENST00000278426 PRAG1Q86YV5 1406 aa23.86■■□□□ 1.41
SLC43A1-201ENST00000278426 NEFMP07197 916 aa23.86■■□□□ 1.41
SLC43A1-201ENST00000278426 CC2D1BQ5T0F9 858 aaKnown RBP23.86■■□□□ 1.41
SLC43A1-201ENST00000278426 CDCA7LQ96GN5 454 aa23.86■■□□□ 1.41
SLC43A1-201ENST00000278426 PER1O15534 1290 aaPredicted RBP23.86■■□□□ 1.41
SLC43A1-201ENST00000278426 ANO8Q9HCE9 1232 aaPredicted RBP23.86■■□□□ 1.41
SLC43A1-201ENST00000278426 E9PCH4 1651 aa23.85■■□□□ 1.41
SLC43A1-201ENST00000278426 PARD3Q8TEW0 1356 aa23.85■■□□□ 1.41
SLC43A1-201ENST00000278426 PLIN1O60240 522 aa23.84■■□□□ 1.41
SLC43A1-201ENST00000278426 ARHGEF5Q12774 1597 aa23.83■■□□□ 1.41
SLC43A1-201ENST00000278426 CCDC141Q6ZP82 1450 aa23.83■■□□□ 1.41
SLC43A1-201ENST00000278426 RTN4Q9NQC3 1192 aaKnown RBP23.83■■□□□ 1.4
SLC43A1-201ENST00000278426 SAMD9LQ8IVG5 1584 aa23.81■■□□□ 1.4
SLC43A1-201ENST00000278426 TRPM1Q7Z4N2 1603 aa23.8■■□□□ 1.4
SLC43A1-201ENST00000278426 PLA2R1Q13018 1463 aa23.79■■□□□ 1.4
SLC43A1-201ENST00000278426 DISP3Q9P2K9 1392 aa23.79■■□□□ 1.4
SLC43A1-201ENST00000278426 MS4A1P11836 297 aa23.79■■□□□ 1.4
SLC43A1-201ENST00000278426 PANK3Q9H999 370 aa23.79■■□□□ 1.4
SLC43A1-201ENST00000278426 TESK2Q96S53 571 aa23.78■■□□□ 1.4
SLC43A1-201ENST00000278426 RSPH4AQ5TD94 716 aa23.78■■□□□ 1.4
SLC43A1-201ENST00000278426 PDE3BQ13370 1112 aa23.77■■□□□ 1.4
SLC43A1-201ENST00000278426 CDC42BPBQ9Y5S2 1711 aa23.77■■□□□ 1.4
SLC43A1-201ENST00000278426 A2MP01023 1474 aa23.76■■□□□ 1.39
SLC43A1-201ENST00000278426 CRBNQ96SW2 442 aa23.75■■□□□ 1.39
SLC43A1-201ENST00000278426 SYCP2Q9BX26 1530 aa23.73■■□□□ 1.39
SLC43A1-201ENST00000278426 GPRASP1Q5JY77 1395 aa23.73■■□□□ 1.39
SLC43A1-201ENST00000278426 PRKCSHP14314 528 aaPredicted RBP23.72■■□□□ 1.39
SLC43A1-201ENST00000278426 USP35Q9P2H5 1018 aa23.72■■□□□ 1.39
SLC43A1-201ENST00000278426 COL17A1Q9UMD9 1497 aaPredicted RBP23.71■■□□□ 1.39
SLC43A1-201ENST00000278426 PREX2Q70Z35 1606 aa23.71■■□□□ 1.39
SLC43A1-201ENST00000278426 PLEKHH2Q8IVE3 1493 aa23.7■■□□□ 1.38
SLC43A1-201ENST00000278426 ERBINQ96RT1 1412 aa23.69■■□□□ 1.38
SLC43A1-201ENST00000278426 PPM1GO15355 546 aaPredicted RBP23.69■■□□□ 1.38
SLC43A1-201ENST00000278426 TMF1P82094 1093 aa23.69■■□□□ 1.38
SLC43A1-201ENST00000278426 ARHGAP5Q13017 1502 aa23.69■■□□□ 1.38
SLC43A1-201ENST00000278426 WASHC2CQ9Y4E1 1318 aa23.68■■□□□ 1.38
SLC43A1-201ENST00000278426 C20orf194Q5TEA3 1177 aa23.67■■□□□ 1.38
SLC43A1-201ENST00000278426 SLC4A3P48751 1232 aa23.66■■□□□ 1.38
SLC43A1-201ENST00000278426 PRDM15P57071 1507 aaPredicted RBP23.65■■□□□ 1.38
SLC43A1-201ENST00000278426 TTC37Q6PGP7 1564 aa23.64■■□□□ 1.37
SLC43A1-201ENST00000278426 ADAMTS8Q9UP79 889 aa23.63■■□□□ 1.37
SLC43A1-201ENST00000278426 UNC13BO14795 1591 aa23.63■■□□□ 1.37
SLC43A1-201ENST00000278426 BLMP54132 1417 aaPredicted RBP23.63■■□□□ 1.37
SLC43A1-201ENST00000278426 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.6■■□□□ 1.37
SLC43A1-201ENST00000278426 DDRGK1Q96HY6 314 aa23.6■■□□□ 1.37
SLC43A1-201ENST00000278426 MYO5CQ9NQX4 1742 aa23.6■■□□□ 1.37
SLC43A1-201ENST00000278426 MAST1Q9Y2H9 1570 aa23.58■■□□□ 1.36
SLC43A1-201ENST00000278426 BRPF3Q9ULD4 1205 aa23.57■■□□□ 1.36
SLC43A1-201ENST00000278426 LAMC1P11047 1609 aa23.57■■□□□ 1.36
SLC43A1-201ENST00000278426 IQGAP3Q86VI3 1631 aa23.57■■□□□ 1.36
SLC43A1-201ENST00000278426 NFKBIBQ15653 356 aa23.57■■□□□ 1.36
SLC43A1-201ENST00000278426 KNSTRNQ9Y448 316 aa23.56■■□□□ 1.36
SLC43A1-201ENST00000278426 KDM2BQ8NHM5 1336 aa23.55■■□□□ 1.36
SLC43A1-201ENST00000278426 PPP2R1AP30153 589 aa23.54■■□□□ 1.36
SLC43A1-201ENST00000278426 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.54■■□□□ 1.36
SLC43A1-201ENST00000278426 EIF2AK4Q9P2K8 1649 aaKnown RBP23.54■■□□□ 1.36
SLC43A1-201ENST00000278426 INSRP06213 1382 aa23.54■■□□□ 1.36
SLC43A1-201ENST00000278426 ZMYM4Q5VZL5 1548 aa23.53■■□□□ 1.36
SLC43A1-201ENST00000278426 GSE1Q14687 1217 aa23.53■■□□□ 1.36
SLC43A1-201ENST00000278426 MAGI2Q86UL8 1455 aa23.53■■□□□ 1.36
SLC43A1-201ENST00000278426 WDR43Q15061 677 aaKnown RBP eCLIP23.52■■□□□ 1.36
SLC43A1-201ENST00000278426 DUOX2Q9NRD8 1548 aa23.52■■□□□ 1.36
SLC43A1-201ENST00000278426 PLXNC1O60486 1568 aa23.51■■□□□ 1.35
SLC43A1-201ENST00000278426 ATP10AO60312 1499 aa23.51■■□□□ 1.35
SLC43A1-201ENST00000278426 PLEKHH1Q9ULM0 1364 aa23.51■■□□□ 1.35
SLC43A1-201ENST00000278426 WDR7Q9Y4E6 1490 aa23.5■■□□□ 1.35
SLC43A1-201ENST00000278426 AMER1Q5JTC6 1135 aaPredicted RBP23.49■■□□□ 1.35
SLC43A1-201ENST00000278426 DUSP27Q5VZP5 1158 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms