RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 AKAP17AQ02040 695 aaKnown RBP16.36■□□□□ 0.21
PRDM16-201ENST00000270722 CCDC191Q8NCU4 936 aa16.36■□□□□ 0.21
PRDM16-201ENST00000270722 ATP6V1DQ9Y5K8 247 aa16.34■□□□□ 0.21
PRDM16-201ENST00000270722 TCERG1O14776 1098 aaKnown RBP16.34■□□□□ 0.21
PRDM16-201ENST00000270722 RSPH4AQ5TD94 716 aa16.34■□□□□ 0.21
PRDM16-201ENST00000270722 SOX12O15370 315 aa16.33■□□□□ 0.21
PRDM16-201ENST00000270722 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.33■□□□□ 0.2
PRDM16-201ENST00000270722 ZNF526Q8TF50 670 aaPredicted RBP16.33■□□□□ 0.2
PRDM16-201ENST00000270722 CCDC47Q96A33 483 aaKnown RBP16.33■□□□□ 0.2
PRDM16-201ENST00000270722 DCAF11Q8TEB1 546 aa16.32■□□□□ 0.2
PRDM16-201ENST00000270722 PES1O00541 588 aaKnown RBP16.32■□□□□ 0.2
PRDM16-201ENST00000270722 EFCAB2Q5VUJ9 269 aa16.32■□□□□ 0.2
PRDM16-201ENST00000270722 USP8P40818 1118 aa16.32■□□□□ 0.2
PRDM16-201ENST00000270722 IPO7O95373 1038 aaKnown RBP16.32■□□□□ 0.2
PRDM16-201ENST00000270722 KIF16BQ96L93 1317 aa16.31■□□□□ 0.2
PRDM16-201ENST00000270722 CWC22Q9HCG8 908 aaKnown RBP16.31■□□□□ 0.2
PRDM16-201ENST00000270722 ANKRD20A12PQ8NF67 263 aa16.3■□□□□ 0.2
PRDM16-201ENST00000270722 PMFBP1Q8TBY8 1022 aa16.3■□□□□ 0.2
PRDM16-201ENST00000270722 DYDC1Q8WWB3 177 aa16.3■□□□□ 0.2
PRDM16-201ENST00000270722 SYNE3Q6ZMZ3 975 aa16.3■□□□□ 0.2
PRDM16-201ENST00000270722 CC2D1BQ5T0F9 858 aaKnown RBP16.3■□□□□ 0.2
PRDM16-201ENST00000270722 PHLDB1Q86UU1 1377 aa16.29■□□□□ 0.2
PRDM16-201ENST00000270722 SSR1P43307 286 aaKnown RBP16.29■□□□□ 0.2
PRDM16-201ENST00000270722 IRX6P78412 446 aaPredicted RBP16.29■□□□□ 0.2
PRDM16-201ENST00000270722 RRP9O43818 475 aaKnown RBP16.29■□□□□ 0.2
PRDM16-201ENST00000270722 NGDNQ8NEJ9 315 aaKnown RBP16.29■□□□□ 0.2
PRDM16-201ENST00000270722 UBE2Q2Q8WVN8 375 aa16.28■□□□□ 0.2
PRDM16-201ENST00000270722 TPD52L1Q16890 204 aaPredicted RBP16.27■□□□□ 0.2
PRDM16-201ENST00000270722 GGT6Q6P531 493 aa16.27■□□□□ 0.2
PRDM16-201ENST00000270722 CCDC43Q96MW1 224 aaKnown RBP16.27■□□□□ 0.2
PRDM16-201ENST00000270722 HOOK1Q9UJC3 728 aaKnown RBP16.27■□□□□ 0.2
PRDM16-201ENST00000270722 RALBP1Q15311 655 aa16.27■□□□□ 0.2
PRDM16-201ENST00000270722 SF3A1Q15459 793 aaKnown RBP16.27■□□□□ 0.2
PRDM16-201ENST00000270722 DEF6Q9H4E7 631 aa16.27■□□□□ 0.2
PRDM16-201ENST00000270722 R3HCC1Q9Y3T6 440 aaKnown RBP16.27■□□□□ 0.2
PRDM16-201ENST00000270722 ST18O60284 1047 aa16.27■□□□□ 0.19
PRDM16-201ENST00000270722 U2AF1L5P0DN76 240 aaPredicted RBP16.27■□□□□ 0.19
PRDM16-201ENST00000270722 U2AF1Q01081 240 aaKnown RBP eCLIP16.27■□□□□ 0.19
PRDM16-201ENST00000270722 UACAQ9BZF9 1416 aa16.26■□□□□ 0.19
PRDM16-201ENST00000270722 INCENPQ9NQS7 918 aa16.26■□□□□ 0.19
PRDM16-201ENST00000270722 AMPHP49418 695 aa16.26■□□□□ 0.19
PRDM16-201ENST00000270722 NEXNQ0ZGT2 675 aa16.25■□□□□ 0.19
PRDM16-201ENST00000270722 TOMM22Q9NS69 142 aa16.25■□□□□ 0.19
PRDM16-201ENST00000270722 EIF4G1Q04637 1599 aaKnown RBP16.24■□□□□ 0.19
PRDM16-201ENST00000270722 HMGB1P1B2RPK0 211 aaPredicted RBP16.24■□□□□ 0.19
PRDM16-201ENST00000270722 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.23■□□□□ 0.19
PRDM16-201ENST00000270722 TRIM6-TRIM34B2RNG4 842 aa16.23■□□□□ 0.19
PRDM16-201ENST00000270722 CDR1P51861 262 aa16.22■□□□□ 0.19
PRDM16-201ENST00000270722 DCTN1Q14203 1278 aa16.22■□□□□ 0.19
PRDM16-201ENST00000270722 ITPRIPQ8IWB1 547 aa16.22■□□□□ 0.19
PRDM16-201ENST00000270722 ACBD3Q9H3P7 528 aa16.22■□□□□ 0.19
PRDM16-201ENST00000270722 SUPT16HQ9Y5B9 1047 aaKnown RBP16.22■□□□□ 0.19
PRDM16-201ENST00000270722 EVA1CP58658 441 aa16.21■□□□□ 0.19
PRDM16-201ENST00000270722 RBM19Q9Y4C8 960 aaKnown RBP16.21■□□□□ 0.19
PRDM16-201ENST00000270722 C1orf141Q5JVX7 400 aa16.21■□□□□ 0.19
PRDM16-201ENST00000270722 ANKRD30AQ9BXX3 1397 aa16.21■□□□□ 0.18
PRDM16-201ENST00000270722 PDS5BQ9NTI5 1447 aa16.21■□□□□ 0.18
PRDM16-201ENST00000270722 STK26Q9P289 416 aa16.2■□□□□ 0.18
PRDM16-201ENST00000270722 PDIA4P13667 645 aaKnown RBP16.2■□□□□ 0.18
PRDM16-201ENST00000270722 ARHGAP35Q9NRY4 1499 aa16.2■□□□□ 0.18
PRDM16-201ENST00000270722 ROCK2O75116 1388 aaKnown RBP16.19■□□□□ 0.18
PRDM16-201ENST00000270722 WWC2Q6AWC2 1192 aa16.19■□□□□ 0.18
PRDM16-201ENST00000270722 TTC5Q8N0Z6 440 aa16.18■□□□□ 0.18
PRDM16-201ENST00000270722 FMN1Q68DA7 1419 aa16.18■□□□□ 0.18
PRDM16-201ENST00000270722 TRIM29Q14134 588 aa16.18■□□□□ 0.18
PRDM16-201ENST00000270722 VPS37DQ86XT2 251 aa16.18■□□□□ 0.18
PRDM16-201ENST00000270722 RUFY2Q8WXA3 655 aa16.18■□□□□ 0.18
PRDM16-201ENST00000270722 HIRIP3Q9BW71 556 aaPredicted RBP16.17■□□□□ 0.18
PRDM16-201ENST00000270722 H3BQV1 296 aa16.17■□□□□ 0.18
PRDM16-201ENST00000270722 IFFO2Q5TF58 517 aa16.17■□□□□ 0.18
PRDM16-201ENST00000270722 SAFB2Q14151 953 aaKnown RBP eCLIP16.17■□□□□ 0.18
PRDM16-201ENST00000270722 TNIKQ9UKE5 1360 aa16.17■□□□□ 0.18
PRDM16-201ENST00000270722 AXDND1Q5T1B0 1012 aaPredicted RBP16.16■□□□□ 0.18
PRDM16-201ENST00000270722 ARGLU1Q9NWB6 273 aaPredicted RBP16.16■□□□□ 0.18
PRDM16-201ENST00000270722 ZRSR2Q15696 482 aaKnown RBP16.16■□□□□ 0.18
PRDM16-201ENST00000270722 GOLGA6L19H0YKK7 550 aa16.16■□□□□ 0.18
PRDM16-201ENST00000270722 ODF2Q5BJF6 829 aa16.16■□□□□ 0.18
PRDM16-201ENST00000270722 CCER2I3L3R5 266 aa16.15■□□□□ 0.18
PRDM16-201ENST00000270722 MSH5O43196 834 aa16.15■□□□□ 0.18
PRDM16-201ENST00000270722 H0YHG0 523 aa16.15■□□□□ 0.18
PRDM16-201ENST00000270722 AK7Q96M32 723 aa16.15■□□□□ 0.18
PRDM16-201ENST00000270722 MIER1Q8N108 512 aa16.15■□□□□ 0.18
PRDM16-201ENST00000270722 FAM184AQ8NB25 1140 aa16.15■□□□□ 0.18
PRDM16-201ENST00000270722 BAZ1AQ9NRL2 1556 aaPredicted RBP16.15■□□□□ 0.18
PRDM16-201ENST00000270722 APBB1O00213 710 aa16.14■□□□□ 0.17
PRDM16-201ENST00000270722 CREBRFQ8IUR6 639 aa16.14■□□□□ 0.17
PRDM16-201ENST00000270722 TRDNQ13061 729 aa16.14■□□□□ 0.17
PRDM16-201ENST00000270722 DDX11L8A8MPP1 907 aa16.14■□□□□ 0.17
PRDM16-201ENST00000270722 DDX58O95786 925 aaKnown RBP16.13■□□□□ 0.17
PRDM16-201ENST00000270722 WASHC2CQ9Y4E1 1318 aa16.13■□□□□ 0.17
PRDM16-201ENST00000270722 TEFQ10587 303 aa16.13■□□□□ 0.17
PRDM16-201ENST00000270722 GSE1Q14687 1217 aa16.12■□□□□ 0.17
PRDM16-201ENST00000270722 ROCK1Q13464 1354 aa16.12■□□□□ 0.17
PRDM16-201ENST00000270722 SETSIPP0DME0 302 aa16.12■□□□□ 0.17
PRDM16-201ENST00000270722 NGEFQ8N5V2 710 aa16.12■□□□□ 0.17
PRDM16-201ENST00000270722 CT47A1Q5JQC4 288 aaPredicted RBP16.11■□□□□ 0.17
PRDM16-201ENST00000270722 FAM13BQ9NYF5 915 aa16.11■□□□□ 0.17
PRDM16-201ENST00000270722 ZKSCAN1P17029 563 aaPredicted RBP16.11■□□□□ 0.17
PRDM16-201ENST00000270722 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.11■□□□□ 0.172e-8■■■■■ 798.5
PRDM16-201ENST00000270722 CAGE1Q8TC20 777 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms