RNA–Protein interactions for RNA: ENST00000267101.7

ERBB3-201, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERBB3, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-201ENST00000267101 RALBP1Q15311 655 aa14.48□□□□□ -0.09
ERBB3-201ENST00000267101 CCDC141Q6ZP82 1450 aa14.47□□□□□ -0.09
ERBB3-201ENST00000267101 NEUROD2Q15784 382 aa14.47□□□□□ -0.09
ERBB3-201ENST00000267101 DDRGK1Q96HY6 314 aa14.47□□□□□ -0.09
ERBB3-201ENST00000267101 ROCK1Q13464 1354 aa14.47□□□□□ -0.09
ERBB3-201ENST00000267101 U2SURPO15042 1029 aaKnown RBP14.46□□□□□ -0.09
ERBB3-201ENST00000267101 TRAK1Q9UPV9 953 aa14.46□□□□□ -0.1
ERBB3-201ENST00000267101 USP47Q96K76 1375 aa14.45□□□□□ -0.1
ERBB3-201ENST00000267101 BECN1Q14457 450 aa14.45□□□□□ -0.1
ERBB3-201ENST00000267101 CD109Q6YHK3 1445 aa14.44□□□□□ -0.1
ERBB3-201ENST00000267101 ST20-MTHFSA0A0A6YYL1 179 aa14.44□□□□□ -0.1
ERBB3-201ENST00000267101 KIAA1107Q9UPP5 1409 aa14.43□□□□□ -0.1
ERBB3-201ENST00000267101 TARBP1Q13395 1621 aaKnown RBP14.43□□□□□ -0.1
ERBB3-201ENST00000267101 STAC3Q96MF2 364 aa14.42□□□□□ -0.1
ERBB3-201ENST00000267101 TERF2IPQ9NYB0 399 aa14.42□□□□□ -0.1
ERBB3-201ENST00000267101 CFAP43Q8NDM7 1665 aa14.42□□□□□ -0.1
ERBB3-201ENST00000267101 FTSJ3Q8IY81 847 aaKnown RBP14.42□□□□□ -0.1
ERBB3-201ENST00000267101 ITSN2Q9NZM3 1697 aa14.42□□□□□ -0.1
ERBB3-201ENST00000267101 ABCC5O15440 1437 aa14.42□□□□□ -0.1
ERBB3-201ENST00000267101 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.41□□□□□ -0.1
ERBB3-201ENST00000267101 A0A0G2JS52 829 aa14.41□□□□□ -0.1
ERBB3-201ENST00000267101 EIF5BO60841 1220 aaKnown RBP14.41□□□□□ -0.1
ERBB3-201ENST00000267101 LAS1LQ9Y4W2 734 aaKnown RBP14.4□□□□□ -0.1
ERBB3-201ENST00000267101 ADGRL1O94910 1474 aa14.4□□□□□ -0.1
ERBB3-201ENST00000267101 ARXQ96QS3 562 aa14.4□□□□□ -0.1
ERBB3-201ENST00000267101 SOX12O15370 315 aa14.39□□□□□ -0.11
ERBB3-201ENST00000267101 NUP153P49790 1475 aaKnown RBP14.39□□□□□ -0.11
ERBB3-201ENST00000267101 NAIPQ13075 1403 aa14.39□□□□□ -0.11
ERBB3-201ENST00000267101 AKNAQ7Z591 1439 aa14.38□□□□□ -0.11
ERBB3-201ENST00000267101 PAK3O75914 559 aaPredicted RBP14.38□□□□□ -0.11
ERBB3-201ENST00000267101 B4GALNT3Q6L9W6 998 aa14.38□□□□□ -0.11
ERBB3-201ENST00000267101 NUP160Q12769 1436 aa14.38□□□□□ -0.11
ERBB3-201ENST00000267101 ATP10BO94823 1461 aa14.38□□□□□ -0.11
ERBB3-201ENST00000267101 RAPGEF3O95398 923 aa14.38□□□□□ -0.11
ERBB3-201ENST00000267101 EVC2Q86UK5 1308 aa14.37□□□□□ -0.11
ERBB3-201ENST00000267101 FRAT1Q92837 279 aaPredicted RBP14.37□□□□□ -0.11
ERBB3-201ENST00000267101 RGS3P49796 1198 aa14.35□□□□□ -0.11
ERBB3-201ENST00000267101 CEP170Q5SW79 1584 aa14.35□□□□□ -0.11
ERBB3-201ENST00000267101 PANK3Q9H999 370 aa14.34□□□□□ -0.11
ERBB3-201ENST00000267101 FANCAO15360 1455 aa14.34□□□□□ -0.11
ERBB3-201ENST00000267101 ANP32EQ9BTT0 268 aa14.34□□□□□ -0.11
ERBB3-201ENST00000267101 GPATCH8Q9UKJ3 1502 aaKnown RBP14.34□□□□□ -0.11
ERBB3-201ENST00000267101 MS4A1P11836 297 aa14.33□□□□□ -0.12
ERBB3-201ENST00000267101 NGDNQ8NEJ9 315 aaKnown RBP14.32□□□□□ -0.12
ERBB3-201ENST00000267101 DISP1Q96F81 1524 aa14.31□□□□□ -0.12
ERBB3-201ENST00000267101 SAMD9Q5K651 1589 aa14.31□□□□□ -0.12
ERBB3-201ENST00000267101 ASXL2Q76L83 1435 aa14.31□□□□□ -0.12
ERBB3-201ENST00000267101 MINK1Q8N4C8 1332 aaPredicted RBP14.31□□□□□ -0.12
ERBB3-201ENST00000267101 MYBBP1AQ9BQG0 1328 aaKnown RBP14.3□□□□□ -0.12
ERBB3-201ENST00000267101 CHMP4BQ9H444 224 aaKnown RBP14.3□□□□□ -0.12
ERBB3-201ENST00000267101 WDR7Q9Y4E6 1490 aa14.3□□□□□ -0.12
ERBB3-201ENST00000267101 GOLGA6L22H0YM25 854 aa14.3□□□□□ -0.12
ERBB3-201ENST00000267101 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.3□□□□□ -0.12
ERBB3-201ENST00000267101 NLRP13Q86W25 1043 aa14.29□□□□□ -0.12
ERBB3-201ENST00000267101 POGZQ7Z3K3 1410 aa14.29□□□□□ -0.12
ERBB3-201ENST00000267101 U2AF1L5P0DN76 240 aaPredicted RBP14.29□□□□□ -0.12
ERBB3-201ENST00000267101 U2AF1Q01081 240 aaKnown RBP eCLIP14.29□□□□□ -0.124e-6■■□□□ 14.4
ERBB3-201ENST00000267101 CENPJQ9HC77 1338 aaPredicted RBP14.29□□□□□ -0.12
ERBB3-201ENST00000267101 PLCH2O75038 1416 aa14.28□□□□□ -0.12
ERBB3-201ENST00000267101 DENND4BO75064 1496 aaPredicted RBP14.28□□□□□ -0.12
ERBB3-201ENST00000267101 NUTM2FA1L443 756 aa14.28□□□□□ -0.12
ERBB3-201ENST00000267101 CCDC7Q96M83 1385 aa14.27□□□□□ -0.12
ERBB3-201ENST00000267101 NCOA1Q15788 1441 aa14.27□□□□□ -0.12
ERBB3-201ENST00000267101 ABCC2Q92887 1545 aa14.27□□□□□ -0.12
ERBB3-201ENST00000267101 CGNL1Q0VF96 1302 aa14.27□□□□□ -0.12
ERBB3-201ENST00000267101 ERICH6BQ5W0A0 696 aa14.27□□□□□ -0.13
ERBB3-201ENST00000267101 CASC1Q6TDU7 716 aa14.27□□□□□ -0.13
ERBB3-201ENST00000267101 RTF1Q92541 710 aaKnown RBP14.26□□□□□ -0.13
ERBB3-201ENST00000267101 ERBINQ96RT1 1412 aa14.26□□□□□ -0.13
ERBB3-201ENST00000267101 NCLP19338 710 aaKnown RBP14.25□□□□□ -0.13
ERBB3-201ENST00000267101 NOP58Q9Y2X3 529 aaKnown RBP14.25□□□□□ -0.13
ERBB3-201ENST00000267101 KIF7Q2M1P5 1343 aa14.24□□□□□ -0.13
ERBB3-201ENST00000267101 SLC52A1Q9NWF4 448 aa14.24□□□□□ -0.13
ERBB3-201ENST00000267101 TCOF1Q13428 1488 aaKnown RBP14.24□□□□□ -0.13
ERBB3-201ENST00000267101 SYCP2Q9BX26 1530 aa14.24□□□□□ -0.13
ERBB3-201ENST00000267101 CALD1Q05682 793 aaKnown RBP14.23□□□□□ -0.13
ERBB3-201ENST00000267101 CNTLNQ9NXG0 1405 aa14.23□□□□□ -0.13
ERBB3-201ENST00000267101 TMEM132EQ6IEE7 984 aa14.23□□□□□ -0.13
ERBB3-201ENST00000267101 RPGRIP1LQ68CZ1 1315 aa14.22□□□□□ -0.13
ERBB3-201ENST00000267101 PRKRIP1Q9H875 184 aaPredicted RBP14.22□□□□□ -0.13
ERBB3-201ENST00000267101 CFAP70Q5T0N1 1121 aa14.22□□□□□ -0.13
ERBB3-201ENST00000267101 CSB-PGBD3P0DP91 1061 aa14.22□□□□□ -0.13
ERBB3-201ENST00000267101 COG3Q96JB2 828 aa14.22□□□□□ -0.13
ERBB3-201ENST00000267101 RCAN3Q9UKA8 241 aa14.21□□□□□ -0.13
ERBB3-201ENST00000267101 TEX14Q8IWB6 1497 aa14.21□□□□□ -0.13
ERBB3-201ENST00000267101 DUOX2Q9NRD8 1548 aa14.21□□□□□ -0.14
ERBB3-201ENST00000267101 AMPHP49418 695 aa14.2□□□□□ -0.14
ERBB3-201ENST00000267101 CCDC146Q8IYE0 955 aa14.2□□□□□ -0.14
ERBB3-201ENST00000267101 RBM19Q9Y4C8 960 aaKnown RBP14.2□□□□□ -0.14
ERBB3-201ENST00000267101 TRIM44Q96DX7 344 aaPredicted RBP14.2□□□□□ -0.14
ERBB3-201ENST00000267101 ANKRD30BQ9BXX2 1392 aa14.2□□□□□ -0.14
ERBB3-201ENST00000267101 FAM135AQ9P2D6 1515 aa14.2□□□□□ -0.14
ERBB3-201ENST00000267101 NBPF8Q3BBV2 869 aa14.19□□□□□ -0.14
ERBB3-201ENST00000267101 CHD1O14646 1710 aa14.19□□□□□ -0.14
ERBB3-201ENST00000267101 TXNDC2Q86VQ3 553 aa14.19□□□□□ -0.14
ERBB3-201ENST00000267101 DHX29Q7Z478 1369 aaKnown RBP14.18□□□□□ -0.14
ERBB3-201ENST00000267101 NBPF1Q3BBV0 1214 aa14.18□□□□□ -0.14
ERBB3-201ENST00000267101 THEMISQ8N1K5 641 aaPredicted RBP14.17□□□□□ -0.14
ERBB3-201ENST00000267101 PTPRKQ15262 1439 aa14.17□□□□□ -0.14
ERBB3-201ENST00000267101 CABP2Q9NPB3 220 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms