RNA–Protein interactions for RNA: ENST00000265379.10

COL6A5-201, Transcript of collagen type VI alpha 5 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A5, Length 9,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-201ENST00000265379 CHGAP10645 457 aaKnown RBP10.67□□□□□ -0.7
COL6A5-201ENST00000265379 ARHGEF5Q12774 1597 aa10.66□□□□□ -0.7
COL6A5-201ENST00000265379 VGFO15240 615 aaPredicted RBP10.66□□□□□ -0.7
COL6A5-201ENST00000265379 USP47Q96K76 1375 aa10.66□□□□□ -0.7
COL6A5-201ENST00000265379 WDR7Q9Y4E6 1490 aa10.66□□□□□ -0.7
COL6A5-201ENST00000265379 ABCC2Q92887 1545 aa10.65□□□□□ -0.7
COL6A5-201ENST00000265379 DCAF11Q8TEB1 546 aa10.65□□□□□ -0.7
COL6A5-201ENST00000265379 TERF2IPQ9NYB0 399 aa10.65□□□□□ -0.7
COL6A5-201ENST00000265379 ADGRL2O95490 1459 aa10.65□□□□□ -0.7
COL6A5-201ENST00000265379 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.65□□□□□ -0.71
COL6A5-201ENST00000265379 ARAP3Q8WWN8 1544 aa10.64□□□□□ -0.71
COL6A5-201ENST00000265379 CCDC136Q96JN2 1154 aa10.64□□□□□ -0.71
COL6A5-201ENST00000265379 RTEL1-TNFRSF6BF6WH68 1400 aa10.63□□□□□ -0.71
COL6A5-201ENST00000265379 PPP4R2Q9NY27 417 aa10.63□□□□□ -0.71
COL6A5-201ENST00000265379 POGZQ7Z3K3 1410 aa10.63□□□□□ -0.71
COL6A5-201ENST00000265379 HDAC5Q9UQL6 1122 aa10.63□□□□□ -0.71
COL6A5-201ENST00000265379 MYBBP1AQ9BQG0 1328 aaKnown RBP10.63□□□□□ -0.71
COL6A5-201ENST00000265379 MAPK8IP3Q9UPT6 1336 aa10.63□□□□□ -0.71
COL6A5-201ENST00000265379 UHRF1BP1LA0JNW5 1464 aa10.62□□□□□ -0.71
COL6A5-201ENST00000265379 HSPA5P11021 654 aaKnown RBP10.62□□□□□ -0.71
COL6A5-201ENST00000265379 KDM2AQ9Y2K7 1162 aa10.62□□□□□ -0.71
COL6A5-201ENST00000265379 HDGFL2Q7Z4V5 671 aaPredicted RBP10.62□□□□□ -0.71
COL6A5-201ENST00000265379 ADCY10Q96PN6 1610 aa10.61□□□□□ -0.71
COL6A5-201ENST00000265379 L3MBTL2Q969R5 705 aa10.61□□□□□ -0.71
COL6A5-201ENST00000265379 RPRD2Q5VT52 1461 aaKnown RBP10.61□□□□□ -0.71
COL6A5-201ENST00000265379 POGKQ9P215 609 aa10.61□□□□□ -0.71
COL6A5-201ENST00000265379 FAM135AQ9P2D6 1515 aa10.61□□□□□ -0.71
COL6A5-201ENST00000265379 NINLQ9Y2I6 1382 aa10.61□□□□□ -0.71
COL6A5-201ENST00000265379 LMOD3Q0VAK6 560 aa10.61□□□□□ -0.71
COL6A5-201ENST00000265379 NUP153P49790 1475 aaKnown RBP10.61□□□□□ -0.71
COL6A5-201ENST00000265379 ZBED9Q6R2W3 1325 aa10.61□□□□□ -0.71
COL6A5-201ENST00000265379 NCOA1Q15788 1441 aa10.6□□□□□ -0.71
COL6A5-201ENST00000265379 BRD4O60885 1362 aaPredicted RBP10.6□□□□□ -0.71
COL6A5-201ENST00000265379 KAT6BQ8WYB5 2073 aa10.6□□□□□ -0.71
COL6A5-201ENST00000265379 CDK13Q14004 1512 aaKnown RBP10.6□□□□□ -0.71
COL6A5-201ENST00000265379 FAM9BQ8IZU0 186 aa10.59□□□□□ -0.71
COL6A5-201ENST00000265379 ZRSR1Q15695 479 aaKnown RBP10.59□□□□□ -0.71
COL6A5-201ENST00000265379 CGNL1Q0VF96 1302 aa10.59□□□□□ -0.71
COL6A5-201ENST00000265379 FKBP8Q14318 412 aa10.59□□□□□ -0.71
COL6A5-201ENST00000265379 BECN1Q14457 450 aa10.59□□□□□ -0.71
COL6A5-201ENST00000265379 ARXQ96QS3 562 aa10.59□□□□□ -0.71
COL6A5-201ENST00000265379 MYO5CQ9NQX4 1742 aa10.59□□□□□ -0.71
COL6A5-201ENST00000265379 SIN3AQ96ST3 1273 aa10.59□□□□□ -0.71
COL6A5-201ENST00000265379 SLC52A1Q9NWF4 448 aa10.59□□□□□ -0.71
COL6A5-201ENST00000265379 PLEKHG5O94827 1062 aa10.59□□□□□ -0.71
COL6A5-201ENST00000265379 GPATCH8Q9UKJ3 1502 aaKnown RBP10.58□□□□□ -0.72
COL6A5-201ENST00000265379 GOLGA6L22H0YM25 854 aa10.58□□□□□ -0.72
COL6A5-201ENST00000265379 EVC2Q86UK5 1308 aa10.57□□□□□ -0.72
COL6A5-201ENST00000265379 NBR1Q14596 966 aa10.57□□□□□ -0.72
COL6A5-201ENST00000265379 ABCC5O15440 1437 aa10.56□□□□□ -0.72
COL6A5-201ENST00000265379 ZNF518AQ6AHZ1 1483 aa10.56□□□□□ -0.72
COL6A5-201ENST00000265379 IPO8O15397 1037 aaKnown RBP10.56□□□□□ -0.72
COL6A5-201ENST00000265379 CCDC7Q96M83 1385 aa10.56□□□□□ -0.72
COL6A5-201ENST00000265379 KIF3BO15066 747 aa10.56□□□□□ -0.72
COL6A5-201ENST00000265379 EID1Q9Y6B2 187 aa10.56□□□□□ -0.72
COL6A5-201ENST00000265379 ABCC10Q5T3U5 1492 aa10.56□□□□□ -0.72
COL6A5-201ENST00000265379 PLCH2O75038 1416 aa10.55□□□□□ -0.72
COL6A5-201ENST00000265379 ADGRL1O94910 1474 aa10.54□□□□□ -0.72
COL6A5-201ENST00000265379 CASC1Q6TDU7 716 aa10.54□□□□□ -0.72
COL6A5-201ENST00000265379 UHRF1BP1Q6BDS2 1440 aa10.54□□□□□ -0.72
COL6A5-201ENST00000265379 ZNF608Q9ULD9 1512 aaPredicted RBP10.54□□□□□ -0.72
COL6A5-201ENST00000265379 DISP1Q96F81 1524 aa10.53□□□□□ -0.72
COL6A5-201ENST00000265379 HNRNPMP52272 730 aaKnown RBP eCLIP10.53□□□□□ -0.72
COL6A5-201ENST00000265379 MAPKBP1O60336 1514 aa10.52□□□□□ -0.72
COL6A5-201ENST00000265379 INSRP06213 1382 aa10.52□□□□□ -0.72
COL6A5-201ENST00000265379 NSD2O96028 1365 aa10.52□□□□□ -0.72
COL6A5-201ENST00000265379 RALGAPBQ86X10 1494 aa10.52□□□□□ -0.72
COL6A5-201ENST00000265379 RGL3Q3MIN7 710 aa10.52□□□□□ -0.73
COL6A5-201ENST00000265379 ARHGEF11O15085 1522 aa10.52□□□□□ -0.73
COL6A5-201ENST00000265379 MORC1Q86VD1 984 aa10.51□□□□□ -0.73
COL6A5-201ENST00000265379 ABCA8O94911 1581 aa10.51□□□□□ -0.73
COL6A5-201ENST00000265379 NEO1Q92859 1461 aa10.51□□□□□ -0.73
COL6A5-201ENST00000265379 PTMAP06454 111 aaKnown RBP10.51□□□□□ -0.73
COL6A5-201ENST00000265379 MAST1Q9Y2H9 1570 aa10.51□□□□□ -0.73
COL6A5-201ENST00000265379 PUS7Q96PZ0 661 aaKnown RBP10.5□□□□□ -0.73
COL6A5-201ENST00000265379 CT47B1P0C2W7 299 aaPredicted RBP10.49□□□□□ -0.73
COL6A5-201ENST00000265379 DNTTIP2Q5QJE6 756 aaKnown RBP10.49□□□□□ -0.73
COL6A5-201ENST00000265379 FANCAO15360 1455 aa10.49□□□□□ -0.73
COL6A5-201ENST00000265379 A0A0G2JS52 829 aa10.49□□□□□ -0.73
COL6A5-201ENST00000265379 DENND4BO75064 1496 aaPredicted RBP10.49□□□□□ -0.73
COL6A5-201ENST00000265379 CEP170Q5SW79 1584 aa10.49□□□□□ -0.73
COL6A5-201ENST00000265379 PRKRIP1Q9H875 184 aaPredicted RBP10.48□□□□□ -0.73
COL6A5-201ENST00000265379 KDM5DQ9BY66 1539 aa10.48□□□□□ -0.73
COL6A5-201ENST00000265379 PLXNC1O60486 1568 aa10.48□□□□□ -0.73
COL6A5-201ENST00000265379 PREX2Q70Z35 1606 aa10.48□□□□□ -0.73
COL6A5-201ENST00000265379 ATAD2Q6PL18 1390 aa10.48□□□□□ -0.73
COL6A5-201ENST00000265379 FTSJ3Q8IY81 847 aaKnown RBP10.48□□□□□ -0.73
COL6A5-201ENST00000265379 ATP10BO94823 1461 aa10.48□□□□□ -0.73
COL6A5-201ENST00000265379 GOLGA6L6A8MZA4 724 aa10.48□□□□□ -0.73
COL6A5-201ENST00000265379 PPM1GO15355 546 aaPredicted RBP10.48□□□□□ -0.73
COL6A5-201ENST00000265379 SALL2Q9Y467 1007 aaPredicted RBP10.48□□□□□ -0.73
COL6A5-201ENST00000265379 CENPJQ9HC77 1338 aaPredicted RBP10.47□□□□□ -0.73
COL6A5-201ENST00000265379 SHROOM2Q13796 1616 aa10.46□□□□□ -0.73
COL6A5-201ENST00000265379 CD109Q6YHK3 1445 aa10.45□□□□□ -0.74
COL6A5-201ENST00000265379 TCERG1O14776 1098 aaKnown RBP10.45□□□□□ -0.74
COL6A5-201ENST00000265379 NRDCO43847 1150 aa10.44□□□□□ -0.74
COL6A5-201ENST00000265379 IL27Q8NEV9 243 aa10.44□□□□□ -0.74
COL6A5-201ENST00000265379 E9PSI1 815 aa10.44□□□□□ -0.74
COL6A5-201ENST00000265379 DHX29Q7Z478 1369 aaKnown RBP10.44□□□□□ -0.74
COL6A5-201ENST00000265379 SRPK2P78362 688 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms