RNA–Protein interactions for RNA: ENST00000264596.3

NEIL3-201, Transcript of nei like DNA glycosylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEIL3, Length 2,408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-201ENST00000264596 RSPH4AQ5TD94 716 aa26.78■■□□□ 1.88
NEIL3-201ENST00000264596 ARHGAP5Q13017 1502 aa26.77■■□□□ 1.88
NEIL3-201ENST00000264596 CHD1O14646 1710 aa26.77■■□□□ 1.88
NEIL3-201ENST00000264596 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.77■■□□□ 1.88
NEIL3-201ENST00000264596 BCL11AQ9H165 835 aa26.77■■□□□ 1.88
NEIL3-201ENST00000264596 TTC37Q6PGP7 1564 aa26.76■■□□□ 1.87
NEIL3-201ENST00000264596 PNISRQ8TF01 805 aaKnown RBP26.76■■□□□ 1.87
NEIL3-201ENST00000264596 CCDC144AA2RUR9 1427 aa26.75■■□□□ 1.87
NEIL3-201ENST00000264596 RGL3Q3MIN7 710 aa26.75■■□□□ 1.87
NEIL3-201ENST00000264596 NUDCQ9Y266 331 aa26.74■■□□□ 1.87
NEIL3-201ENST00000264596 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.71■■□□□ 1.87
NEIL3-201ENST00000264596 PRAG1Q86YV5 1406 aa26.7■■□□□ 1.86
NEIL3-201ENST00000264596 MSH5O43196 834 aa26.69■■□□□ 1.86
NEIL3-201ENST00000264596 TRPM1Q7Z4N2 1603 aa26.68■■□□□ 1.86
NEIL3-201ENST00000264596 UNC13BO14795 1591 aa26.68■■□□□ 1.86
NEIL3-201ENST00000264596 MAST1Q9Y2H9 1570 aa26.67■■□□□ 1.86
NEIL3-201ENST00000264596 MYBBP1AQ9BQG0 1328 aaKnown RBP26.67■■□□□ 1.86
NEIL3-201ENST00000264596 E9PCH4 1651 aa26.67■■□□□ 1.86
NEIL3-201ENST00000264596 NBPF1Q3BBV0 1214 aa26.67■■□□□ 1.86
NEIL3-201ENST00000264596 PLA2R1Q13018 1463 aa26.66■■□□□ 1.86
NEIL3-201ENST00000264596 ERCC6L2Q5T890 1561 aa26.65■■□□□ 1.86
NEIL3-201ENST00000264596 FANCIQ9NVI1 1328 aa26.65■■□□□ 1.86
NEIL3-201ENST00000264596 RALBP1Q15311 655 aa26.65■■□□□ 1.86
NEIL3-201ENST00000264596 PLEKHH2Q8IVE3 1493 aa26.64■■□□□ 1.86
NEIL3-201ENST00000264596 MYO5CQ9NQX4 1742 aa26.64■■□□□ 1.86
NEIL3-201ENST00000264596 SHROOM2Q13796 1616 aa26.64■■□□□ 1.85
NEIL3-201ENST00000264596 BRD4O60885 1362 aaPredicted RBP26.63■■□□□ 1.85
NEIL3-201ENST00000264596 A2MP01023 1474 aa26.62■■□□□ 1.85
NEIL3-201ENST00000264596 LRPPRCP42704 1394 aaKnown RBP26.61■■□□□ 1.85
NEIL3-201ENST00000264596 KTN1Q86UP2 1357 aaKnown RBP26.61■■□□□ 1.85
NEIL3-201ENST00000264596 ABCC2Q92887 1545 aa26.61■■□□□ 1.85
NEIL3-201ENST00000264596 PLXNC1O60486 1568 aa26.6■■□□□ 1.85
NEIL3-201ENST00000264596 IQGAP3Q86VI3 1631 aa26.59■■□□□ 1.85
NEIL3-201ENST00000264596 RNF123Q5XPI4 1314 aa26.59■■□□□ 1.85
NEIL3-201ENST00000264596 DUOX2Q9NRD8 1548 aa26.54■■□□□ 1.84
NEIL3-201ENST00000264596 GPRASP1Q5JY77 1395 aa26.54■■□□□ 1.84
NEIL3-201ENST00000264596 CCDC136Q96JN2 1154 aa26.53■■□□□ 1.84
NEIL3-201ENST00000264596 NLRP13Q86W25 1043 aa26.52■■□□□ 1.84
NEIL3-201ENST00000264596 SALL2Q9Y467 1007 aaPredicted RBP26.52■■□□□ 1.84
NEIL3-201ENST00000264596 PARD3Q8TEW0 1356 aa26.52■■□□□ 1.84
NEIL3-201ENST00000264596 DISP3Q9P2K9 1392 aa26.51■■□□□ 1.83
NEIL3-201ENST00000264596 PRDM15P57071 1507 aaPredicted RBP26.51■■□□□ 1.83
NEIL3-201ENST00000264596 COL17A1Q9UMD9 1497 aaPredicted RBP26.51■■□□□ 1.83
NEIL3-201ENST00000264596 ERBINQ96RT1 1412 aa26.49■■□□□ 1.83
NEIL3-201ENST00000264596 PER1O15534 1290 aaPredicted RBP26.49■■□□□ 1.83
NEIL3-201ENST00000264596 TESK2Q96S53 571 aa26.49■■□□□ 1.83
NEIL3-201ENST00000264596 LAMC1P11047 1609 aa26.48■■□□□ 1.83
NEIL3-201ENST00000264596 PLCH2O75038 1416 aa26.48■■□□□ 1.83
NEIL3-201ENST00000264596 CC2D1BQ5T0F9 858 aaKnown RBP26.48■■□□□ 1.83
NEIL3-201ENST00000264596 ERICH6Q7L0X2 663 aa26.48■■□□□ 1.83
NEIL3-201ENST00000264596 MAGI2Q86UL8 1455 aa26.47■■□□□ 1.83
NEIL3-201ENST00000264596 EIF2AK4Q9P2K8 1649 aaKnown RBP26.47■■□□□ 1.83
NEIL3-201ENST00000264596 EFCAB2Q5VUJ9 269 aa26.47■■□□□ 1.83
NEIL3-201ENST00000264596 ZCCHC11Q5TAX3 1644 aaKnown RBP26.46■■□□□ 1.83
NEIL3-201ENST00000264596 ATP10AO60312 1499 aa26.44■■□□□ 1.82
NEIL3-201ENST00000264596 PANK3Q9H999 370 aa26.44■■□□□ 1.82
NEIL3-201ENST00000264596 TRAPPC8Q9Y2L5 1435 aa26.43■■□□□ 1.82
NEIL3-201ENST00000264596 ABCC1P33527 1531 aa26.42■■□□□ 1.82
NEIL3-201ENST00000264596 TMF1P82094 1093 aa26.41■■□□□ 1.82
NEIL3-201ENST00000264596 RRP1P56182 461 aaKnown RBP26.38■■□□□ 1.81
NEIL3-201ENST00000264596 RCAN3Q9UKA8 241 aa26.37■■□□□ 1.81
NEIL3-201ENST00000264596 WASHC2CQ9Y4E1 1318 aa26.36■■□□□ 1.81
NEIL3-201ENST00000264596 SPAG9O60271 1321 aaKnown RBP26.35■■□□□ 1.81
NEIL3-201ENST00000264596 RNF17Q9BXT8 1623 aaKnown RBP26.35■■□□□ 1.81
NEIL3-201ENST00000264596 AFAP1Q8N556 730 aa26.35■■□□□ 1.81
NEIL3-201ENST00000264596 CDCA7LQ96GN5 454 aa26.33■■□□□ 1.8
NEIL3-201ENST00000264596 UHRF1BP1LA0JNW5 1464 aa26.32■■□□□ 1.8
NEIL3-201ENST00000264596 PDE3BQ13370 1112 aa26.31■■□□□ 1.8
NEIL3-201ENST00000264596 EXOC6Q8TAG9 804 aa26.31■■□□□ 1.8
NEIL3-201ENST00000264596 CLASP1Q7Z460 1538 aa26.3■■□□□ 1.8
NEIL3-201ENST00000264596 MADDQ8WXG6 1647 aa26.29■■□□□ 1.8
NEIL3-201ENST00000264596 ZFYVE16Q7Z3T8 1539 aa26.27■■□□□ 1.8
NEIL3-201ENST00000264596 BLMP54132 1417 aaPredicted RBP26.26■■□□□ 1.79
NEIL3-201ENST00000264596 TRPM2O94759 1503 aa26.26■■□□□ 1.79
NEIL3-201ENST00000264596 RTEL1-TNFRSF6BF6WH68 1400 aa26.24■■□□□ 1.79
NEIL3-201ENST00000264596 IQGAP1P46940 1657 aa26.23■■□□□ 1.79
NEIL3-201ENST00000264596 SPHKAPQ2M3C7 1700 aa26.23■■□□□ 1.79
NEIL3-201ENST00000264596 WDR7Q9Y4E6 1490 aa26.23■■□□□ 1.79
NEIL3-201ENST00000264596 CLTCL1P53675 1640 aa26.22■■□□□ 1.79
NEIL3-201ENST00000264596 CEP152O94986 1710 aa26.22■■□□□ 1.79
NEIL3-201ENST00000264596 MYT1LQ9UL68 1186 aa26.21■■□□□ 1.79
NEIL3-201ENST00000264596 KNSTRNQ9Y448 316 aa26.21■■□□□ 1.79
NEIL3-201ENST00000264596 INSRP06213 1382 aa26.19■■□□□ 1.78
NEIL3-201ENST00000264596 PTPRTO14522 1441 aa26.19■■□□□ 1.78
NEIL3-201ENST00000264596 ADAMTS8Q9UP79 889 aa26.18■■□□□ 1.78
NEIL3-201ENST00000264596 NOP58Q9Y2X3 529 aaKnown RBP26.18■■□□□ 1.78
NEIL3-201ENST00000264596 SCAF11Q99590 1463 aaKnown RBP26.18■■□□□ 1.78
NEIL3-201ENST00000264596 ZMYM4Q5VZL5 1548 aa26.18■■□□□ 1.78
NEIL3-201ENST00000264596 ARAP3Q8WWN8 1544 aa26.18■■□□□ 1.78
NEIL3-201ENST00000264596 PLIN1O60240 522 aa26.17■■□□□ 1.78
NEIL3-201ENST00000264596 DEPDC5O75140 1603 aa26.17■■□□□ 1.78
NEIL3-201ENST00000264596 TET3O43151 1660 aa26.16■■□□□ 1.78
NEIL3-201ENST00000264596 PPP2R1AP30153 589 aa26.16■■□□□ 1.78
NEIL3-201ENST00000264596 KIF3BO15066 747 aa26.15■■□□□ 1.78
NEIL3-201ENST00000264596 KANK1Q14678 1352 aa26.15■■□□□ 1.78
NEIL3-201ENST00000264596 ATP7AQ04656 1500 aa26.15■■□□□ 1.78
NEIL3-201ENST00000264596 FANCAO15360 1455 aa26.15■■□□□ 1.78
NEIL3-201ENST00000264596 ANP32AP39687 249 aaKnown RBP26.14■■□□□ 1.78
NEIL3-201ENST00000264596 SCAPERQ9BY12 1400 aa26.14■■□□□ 1.77
NEIL3-201ENST00000264596 CDCA8Q53HL2 280 aa26.14■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms