RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 MYBBP1AQ9BQG0 1328 aaKnown RBP22.2■■□□□ 1.14
ZNF541-201ENST00000263351 ATP10BO94823 1461 aa22.2■■□□□ 1.14
ZNF541-201ENST00000263351 UHRF1BP1Q6BDS2 1440 aa22.2■■□□□ 1.14
ZNF541-201ENST00000263351 RRP1P56182 461 aaKnown RBP22.19■■□□□ 1.14
ZNF541-201ENST00000263351 LRPPRCP42704 1394 aaKnown RBP22.19■■□□□ 1.14
ZNF541-201ENST00000263351 ABCC10Q5T3U5 1492 aa22.17■■□□□ 1.14
ZNF541-201ENST00000263351 RCAN3Q9UKA8 241 aa22.15■■□□□ 1.14
ZNF541-201ENST00000263351 MAGI1Q96QZ7 1491 aaPredicted RBP22.15■■□□□ 1.14
ZNF541-201ENST00000263351 ADCY10Q96PN6 1610 aa22.14■■□□□ 1.14
ZNF541-201ENST00000263351 IPO9Q96P70 1041 aaKnown RBP22.13■■□□□ 1.13
ZNF541-201ENST00000263351 DISP3Q9P2K9 1392 aa22.13■■□□□ 1.13
ZNF541-201ENST00000263351 ERCC6Q03468 1493 aa22.12■■□□□ 1.13
ZNF541-201ENST00000263351 ANP32AP39687 249 aaKnown RBP22.12■■□□□ 1.13
ZNF541-201ENST00000263351 BRD4O60885 1362 aaPredicted RBP22.12■■□□□ 1.13
ZNF541-201ENST00000263351 SYNJ2O15056 1496 aa22.12■■□□□ 1.13
ZNF541-201ENST00000263351 ARID4BQ4LE39 1312 aaPredicted RBP22.12■■□□□ 1.13
ZNF541-201ENST00000263351 CARMIL2Q6F5E8 1435 aa22.11■■□□□ 1.13
ZNF541-201ENST00000263351 PER1O15534 1290 aaPredicted RBP22.11■■□□□ 1.13
ZNF541-201ENST00000263351 RALBP1Q15311 655 aa22.09■■□□□ 1.13
ZNF541-201ENST00000263351 PANK3Q9H999 370 aa22.08■■□□□ 1.13
ZNF541-201ENST00000263351 LAS1LQ9Y4W2 734 aaKnown RBP22.08■■□□□ 1.13
ZNF541-201ENST00000263351 ABCA8O94911 1581 aa22.08■■□□□ 1.13
ZNF541-201ENST00000263351 KDM5DQ9BY66 1539 aa22.08■■□□□ 1.12
ZNF541-201ENST00000263351 NLRP13Q86W25 1043 aa22.07■■□□□ 1.12
ZNF541-201ENST00000263351 ZBTB47Q9UFB7 747 aaPredicted RBP22.07■■□□□ 1.12
ZNF541-201ENST00000263351 FAM135AQ9P2D6 1515 aa22.07■■□□□ 1.12
ZNF541-201ENST00000263351 C20orf194Q5TEA3 1177 aa22.07■■□□□ 1.12
ZNF541-201ENST00000263351 PRAG1Q86YV5 1406 aa22.06■■□□□ 1.12
ZNF541-201ENST00000263351 KTN1Q86UP2 1357 aaKnown RBP22.06■■□□□ 1.12
ZNF541-201ENST00000263351 ARHGEF12Q9NZN5 1544 aa22.06■■□□□ 1.12
ZNF541-201ENST00000263351 PLA2R1Q13018 1463 aa22.06■■□□□ 1.12
ZNF541-201ENST00000263351 E9PCH4 1651 aa22.06■■□□□ 1.12
ZNF541-201ENST00000263351 PARD3Q8TEW0 1356 aa22.05■■□□□ 1.12
ZNF541-201ENST00000263351 CCDC144AA2RUR9 1427 aa22.04■■□□□ 1.12
ZNF541-201ENST00000263351 TESK2Q96S53 571 aa22.04■■□□□ 1.12
ZNF541-201ENST00000263351 PTPRGP23470 1445 aa22.04■■□□□ 1.12
ZNF541-201ENST00000263351 NUP160Q12769 1436 aa22.03■■□□□ 1.12
ZNF541-201ENST00000263351 SAMD9LQ8IVG5 1584 aa22.03■■□□□ 1.12
ZNF541-201ENST00000263351 CRBNQ96SW2 442 aa22.03■■□□□ 1.12
ZNF541-201ENST00000263351 PDE4AP27815 886 aa22.02■■□□□ 1.12
ZNF541-201ENST00000263351 A2MP01023 1474 aa22.02■■□□□ 1.12
ZNF541-201ENST00000263351 SHANK2Q9UPX8 1470 aa22.02■■□□□ 1.12
ZNF541-201ENST00000263351 TRPM1Q7Z4N2 1603 aa22■■□□□ 1.11
ZNF541-201ENST00000263351 SYCP2Q9BX26 1530 aa21.99■■□□□ 1.11
ZNF541-201ENST00000263351 CDC42BPBQ9Y5S2 1711 aa21.98■■□□□ 1.11
ZNF541-201ENST00000263351 PLEKHH2Q8IVE3 1493 aa21.97■■□□□ 1.11
ZNF541-201ENST00000263351 ADAMTS8Q9UP79 889 aa21.97■■□□□ 1.11
ZNF541-201ENST00000263351 CCDC141Q6ZP82 1450 aa21.96■■□□□ 1.11
ZNF541-201ENST00000263351 SLC4A3P48751 1232 aa21.94■■□□□ 1.1
ZNF541-201ENST00000263351 BACH2Q9BYV9 841 aa21.93■■□□□ 1.1
ZNF541-201ENST00000263351 COL17A1Q9UMD9 1497 aaPredicted RBP21.92■■□□□ 1.1
ZNF541-201ENST00000263351 ERBINQ96RT1 1412 aa21.91■■□□□ 1.1
ZNF541-201ENST00000263351 TTC37Q6PGP7 1564 aa21.9■■□□□ 1.1
ZNF541-201ENST00000263351 RTL5Q5HYW3 569 aaPredicted RBP21.9■■□□□ 1.1
ZNF541-201ENST00000263351 ARHGAP5Q13017 1502 aa21.89■■□□□ 1.09
ZNF541-201ENST00000263351 CCDC146Q8IYE0 955 aa21.89■■□□□ 1.09
ZNF541-201ENST00000263351 PLEKHH1Q9ULM0 1364 aa21.89■■□□□ 1.09
ZNF541-201ENST00000263351 TCERG1O14776 1098 aaKnown RBP21.89■■□□□ 1.09
ZNF541-201ENST00000263351 ARHGEF5Q12774 1597 aa21.88■■□□□ 1.09
ZNF541-201ENST00000263351 MYO5CQ9NQX4 1742 aa21.86■■□□□ 1.09
ZNF541-201ENST00000263351 MAGI2Q86UL8 1455 aa21.86■■□□□ 1.09
ZNF541-201ENST00000263351 TMF1P82094 1093 aa21.85■■□□□ 1.09
ZNF541-201ENST00000263351 GPRASP1Q5JY77 1395 aa21.85■■□□□ 1.09
ZNF541-201ENST00000263351 NEFMP07197 916 aa21.85■■□□□ 1.09
ZNF541-201ENST00000263351 RTN4Q9NQC3 1192 aaKnown RBP21.85■■□□□ 1.09
ZNF541-201ENST00000263351 PREX2Q70Z35 1606 aa21.85■■□□□ 1.09
ZNF541-201ENST00000263351 BLMP54132 1417 aaPredicted RBP21.84■■□□□ 1.09
ZNF541-201ENST00000263351 PDE3BQ13370 1112 aa21.84■■□□□ 1.09
ZNF541-201ENST00000263351 PRDM15P57071 1507 aaPredicted RBP21.84■■□□□ 1.09
ZNF541-201ENST00000263351 IL27Q8NEV9 243 aa21.84■■□□□ 1.09
ZNF541-201ENST00000263351 SPINK5Q9NQ38 1064 aaPredicted RBP21.83■■□□□ 1.09
ZNF541-201ENST00000263351 PPP2R1AP30153 589 aa21.83■■□□□ 1.08
ZNF541-201ENST00000263351 ERCC6L2Q5T890 1561 aa21.83■■□□□ 1.08
ZNF541-201ENST00000263351 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.81■■□□□ 1.08
ZNF541-201ENST00000263351 MYT1LQ9UL68 1186 aa21.8■■□□□ 1.08
ZNF541-201ENST00000263351 DUSP27Q5VZP5 1158 aa21.79■■□□□ 1.08
ZNF541-201ENST00000263351 DMRT2Q9Y5R5 561 aa21.78■■□□□ 1.08
ZNF541-201ENST00000263351 KNSTRNQ9Y448 316 aa21.78■■□□□ 1.08
ZNF541-201ENST00000263351 WDR7Q9Y4E6 1490 aa21.77■■□□□ 1.08
ZNF541-201ENST00000263351 RGS3P49796 1198 aa21.77■■□□□ 1.08
ZNF541-201ENST00000263351 AMER1Q5JTC6 1135 aaPredicted RBP21.77■■□□□ 1.08
ZNF541-201ENST00000263351 AFAP1Q8N556 730 aa21.76■■□□□ 1.07
ZNF541-201ENST00000263351 UNC13BO14795 1591 aa21.76■■□□□ 1.07
ZNF541-201ENST00000263351 WDR43Q15061 677 aaKnown RBP eCLIP21.76■■□□□ 1.07
ZNF541-201ENST00000263351 ZMYM4Q5VZL5 1548 aa21.75■■□□□ 1.07
ZNF541-201ENST00000263351 BCAR3O75815 825 aa21.73■■□□□ 1.07
ZNF541-201ENST00000263351 TRAPPC8Q9Y2L5 1435 aa21.73■■□□□ 1.07
ZNF541-201ENST00000263351 MS4A1P11836 297 aa21.72■■□□□ 1.07
ZNF541-201ENST00000263351 KDM2BQ8NHM5 1336 aa21.72■■□□□ 1.07
ZNF541-201ENST00000263351 APAF1O14727 1248 aa21.71■■□□□ 1.07
ZNF541-201ENST00000263351 RSPH4AQ5TD94 716 aa21.71■■□□□ 1.07
ZNF541-201ENST00000263351 IQGAP3Q86VI3 1631 aa21.71■■□□□ 1.07
ZNF541-201ENST00000263351 WASHC2CQ9Y4E1 1318 aa21.68■■□□□ 1.06
ZNF541-201ENST00000263351 GOLGA2Q08379 1002 aa21.67■■□□□ 1.06
ZNF541-201ENST00000263351 ZNF521Q96K83 1311 aa21.67■■□□□ 1.06
ZNF541-201ENST00000263351 TNNT2P45379 298 aaPredicted RBP21.67■■□□□ 1.06
ZNF541-201ENST00000263351 C8orf34Q49A92 452 aa21.66■■□□□ 1.06
ZNF541-201ENST00000263351 CFAP70Q5T0N1 1121 aa21.66■■□□□ 1.06
ZNF541-201ENST00000263351 SENP3Q9H4L4 574 aaPredicted RBP21.66■■□□□ 1.06
ZNF541-201ENST00000263351 MAST1Q9Y2H9 1570 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms