RNA–Protein interactions for RNA: ENST00000262158.6

SMAD7-201, Transcript of SMAD family member 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD7, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD7-201ENST00000262158 TTC37Q6PGP7 1564 aa26.1■■□□□ 1.77
SMAD7-201ENST00000262158 SHANK2Q9UPX8 1470 aa26.1■■□□□ 1.77
SMAD7-201ENST00000262158 PLEKHH2Q8IVE3 1493 aa26.09■■□□□ 1.77
SMAD7-201ENST00000262158 UHRF1BP1Q6BDS2 1440 aa26.08■■□□□ 1.77
SMAD7-201ENST00000262158 CCDC144AA2RUR9 1427 aa26.08■■□□□ 1.77
SMAD7-201ENST00000262158 NUDCQ9Y266 331 aa26.06■■□□□ 1.76
SMAD7-201ENST00000262158 CHD1O14646 1710 aa26.06■■□□□ 1.76
SMAD7-201ENST00000262158 PLA2R1Q13018 1463 aa26.05■■□□□ 1.76
SMAD7-201ENST00000262158 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.02■■□□□ 1.76
SMAD7-201ENST00000262158 ARHGEF12Q9NZN5 1544 aa26.01■■□□□ 1.75
SMAD7-201ENST00000262158 DISP3Q9P2K9 1392 aa26■■□□□ 1.75
SMAD7-201ENST00000262158 AFAP1Q8N556 730 aa26■■□□□ 1.75
SMAD7-201ENST00000262158 PREX2Q70Z35 1606 aa25.99■■□□□ 1.75
SMAD7-201ENST00000262158 KDM5DQ9BY66 1539 aa25.99■■□□□ 1.75
SMAD7-201ENST00000262158 PRAG1Q86YV5 1406 aa25.98■■□□□ 1.75
SMAD7-201ENST00000262158 SMG6Q86US8 1419 aaKnown RBP25.98■■□□□ 1.75
SMAD7-201ENST00000262158 BCL11AQ9H165 835 aa25.97■■□□□ 1.75
SMAD7-201ENST00000262158 ARHGEF5Q12774 1597 aa25.97■■□□□ 1.75
SMAD7-201ENST00000262158 CDCA7LQ96GN5 454 aa25.97■■□□□ 1.75
SMAD7-201ENST00000262158 A2MP01023 1474 aa25.97■■□□□ 1.75
SMAD7-201ENST00000262158 MYBBP1AQ9BQG0 1328 aaKnown RBP25.97■■□□□ 1.75
SMAD7-201ENST00000262158 CCDC136Q96JN2 1154 aa25.95■■□□□ 1.75
SMAD7-201ENST00000262158 PANK3Q9H999 370 aa25.95■■□□□ 1.75
SMAD7-201ENST00000262158 MYT1LQ9UL68 1186 aa25.95■■□□□ 1.74
SMAD7-201ENST00000262158 TESK2Q96S53 571 aa25.92■■□□□ 1.74
SMAD7-201ENST00000262158 ARID4BQ4LE39 1312 aaPredicted RBP25.92■■□□□ 1.74
SMAD7-201ENST00000262158 PER1O15534 1290 aaPredicted RBP25.91■■□□□ 1.74
SMAD7-201ENST00000262158 TRAPPC8Q9Y2L5 1435 aa25.91■■□□□ 1.74
SMAD7-201ENST00000262158 PLIN1O60240 522 aa25.88■■□□□ 1.73
SMAD7-201ENST00000262158 RSPH4AQ5TD94 716 aa25.88■■□□□ 1.73
SMAD7-201ENST00000262158 ERICH6BQ5W0A0 696 aa25.87■■□□□ 1.73
SMAD7-201ENST00000262158 RALBP1Q15311 655 aa25.86■■□□□ 1.73
SMAD7-201ENST00000262158 EXOC6Q8TAG9 804 aa25.86■■□□□ 1.73
SMAD7-201ENST00000262158 KTN1Q86UP2 1357 aaKnown RBP25.86■■□□□ 1.73
SMAD7-201ENST00000262158 TRPM1Q7Z4N2 1603 aa25.86■■□□□ 1.73
SMAD7-201ENST00000262158 SKAP1Q86WV1 359 aa25.86■■□□□ 1.73
SMAD7-201ENST00000262158 LRPPRCP42704 1394 aaKnown RBP25.84■■□□□ 1.73
SMAD7-201ENST00000262158 BRD4O60885 1362 aaPredicted RBP25.83■■□□□ 1.73
SMAD7-201ENST00000262158 EFCAB2Q5VUJ9 269 aa25.83■■□□□ 1.73
SMAD7-201ENST00000262158 NLRP13Q86W25 1043 aa25.83■■□□□ 1.73
SMAD7-201ENST00000262158 ERICH6Q7L0X2 663 aa25.83■■□□□ 1.73
SMAD7-201ENST00000262158 ABCC2Q92887 1545 aa25.81■■□□□ 1.72
SMAD7-201ENST00000262158 FANCIQ9NVI1 1328 aa25.81■■□□□ 1.72
SMAD7-201ENST00000262158 SENP3Q9H4L4 574 aaPredicted RBP25.8■■□□□ 1.72
SMAD7-201ENST00000262158 PARD3Q8TEW0 1356 aa25.78■■□□□ 1.72
SMAD7-201ENST00000262158 SPAG9O60271 1321 aaKnown RBP25.78■■□□□ 1.72
SMAD7-201ENST00000262158 RNF123Q5XPI4 1314 aa25.78■■□□□ 1.72
SMAD7-201ENST00000262158 MYO5CQ9NQX4 1742 aa25.78■■□□□ 1.72
SMAD7-201ENST00000262158 ERBINQ96RT1 1412 aa25.78■■□□□ 1.72
SMAD7-201ENST00000262158 RCAN3Q9UKA8 241 aa25.77■■□□□ 1.72
SMAD7-201ENST00000262158 RRP1P56182 461 aaKnown RBP25.76■■□□□ 1.71
SMAD7-201ENST00000262158 TMF1P82094 1093 aa25.76■■□□□ 1.71
SMAD7-201ENST00000262158 E9PCH4 1651 aa25.75■■□□□ 1.71
SMAD7-201ENST00000262158 UNC13BO14795 1591 aa25.75■■□□□ 1.71
SMAD7-201ENST00000262158 PLCH2O75038 1416 aa25.75■■□□□ 1.71
SMAD7-201ENST00000262158 PAK3O75914 559 aaPredicted RBP25.74■■□□□ 1.71
SMAD7-201ENST00000262158 COL17A1Q9UMD9 1497 aaPredicted RBP25.73■■□□□ 1.71
SMAD7-201ENST00000262158 KIF3BO15066 747 aa25.73■■□□□ 1.71
SMAD7-201ENST00000262158 ZCCHC11Q5TAX3 1644 aaKnown RBP25.72■■□□□ 1.71
SMAD7-201ENST00000262158 SHROOM2Q13796 1616 aa25.72■■□□□ 1.71
SMAD7-201ENST00000262158 ADAMTS8Q9UP79 889 aa25.72■■□□□ 1.71
SMAD7-201ENST00000262158 GPRASP1Q5JY77 1395 aa25.71■■□□□ 1.71
SMAD7-201ENST00000262158 DUOX2Q9NRD8 1548 aa25.69■■□□□ 1.7
SMAD7-201ENST00000262158 IQGAP3Q86VI3 1631 aa25.69■■□□□ 1.7
SMAD7-201ENST00000262158 NPM2Q86SE8 214 aaKnown RBP25.68■■□□□ 1.7
SMAD7-201ENST00000262158 MAST1Q9Y2H9 1570 aa25.67■■□□□ 1.7
SMAD7-201ENST00000262158 PRDM15P57071 1507 aaPredicted RBP25.67■■□□□ 1.7
SMAD7-201ENST00000262158 MAGI2Q86UL8 1455 aa25.66■■□□□ 1.7
SMAD7-201ENST00000262158 NBR1Q14596 966 aa25.66■■□□□ 1.7
SMAD7-201ENST00000262158 CFAP70Q5T0N1 1121 aa25.65■■□□□ 1.7
SMAD7-201ENST00000262158 C20orf194Q5TEA3 1177 aa25.65■■□□□ 1.7
SMAD7-201ENST00000262158 CCDC146Q8IYE0 955 aa25.65■■□□□ 1.7
SMAD7-201ENST00000262158 PLXNC1O60486 1568 aa25.64■■□□□ 1.7
SMAD7-201ENST00000262158 CHGAP10645 457 aaKnown RBP25.64■■□□□ 1.69
SMAD7-201ENST00000262158 UGGT1Q9NYU2 1555 aa25.63■■□□□ 1.69
SMAD7-201ENST00000262158 KNSTRNQ9Y448 316 aa25.63■■□□□ 1.69
SMAD7-201ENST00000262158 SCAPERQ9BY12 1400 aa25.63■■□□□ 1.69
SMAD7-201ENST00000262158 ABCC1P33527 1531 aa25.63■■□□□ 1.69
SMAD7-201ENST00000262158 ATP10AO60312 1499 aa25.6■■□□□ 1.69
SMAD7-201ENST00000262158 PPP2R1AP30153 589 aa25.6■■□□□ 1.69
SMAD7-201ENST00000262158 CRBNQ96SW2 442 aa25.59■■□□□ 1.69
SMAD7-201ENST00000262158 ADGRF5Q8IZF2 1346 aa25.58■■□□□ 1.69
SMAD7-201ENST00000262158 NUTM2DQ5VT03 806 aaPredicted RBP25.58■■□□□ 1.69
SMAD7-201ENST00000262158 WDR7Q9Y4E6 1490 aa25.56■■□□□ 1.68
SMAD7-201ENST00000262158 AMER1Q5JTC6 1135 aaPredicted RBP25.55■■□□□ 1.68
SMAD7-201ENST00000262158 TNNT2P45379 298 aaPredicted RBP25.55■■□□□ 1.68
SMAD7-201ENST00000262158 PLEKHH1Q9ULM0 1364 aa25.54■■□□□ 1.68
SMAD7-201ENST00000262158 CLTCL1P53675 1640 aa25.53■■□□□ 1.68
SMAD7-201ENST00000262158 WDR43Q15061 677 aaKnown RBP eCLIP25.52■■□□□ 1.68
SMAD7-201ENST00000262158 NOP58Q9Y2X3 529 aaKnown RBP25.52■■□□□ 1.68
SMAD7-201ENST00000262158 ZFYVE16Q7Z3T8 1539 aa25.51■■□□□ 1.67
SMAD7-201ENST00000262158 FANCAO15360 1455 aa25.51■■□□□ 1.67
SMAD7-201ENST00000262158 MADDQ8WXG6 1647 aa25.5■■□□□ 1.67
SMAD7-201ENST00000262158 SPINK5Q9NQ38 1064 aaPredicted RBP25.49■■□□□ 1.67
SMAD7-201ENST00000262158 CFAP65Q6ZU64 1925 aaKnown RBP25.49■■□□□ 1.67
SMAD7-201ENST00000262158 GGT6Q6P531 493 aa25.49■■□□□ 1.67
SMAD7-201ENST00000262158 CLASP1Q7Z460 1538 aa25.49■■□□□ 1.67
SMAD7-201ENST00000262158 EIF2AK4Q9P2K8 1649 aaKnown RBP25.48■■□□□ 1.67
SMAD7-201ENST00000262158 TMEM132EQ6IEE7 984 aa25.46■■□□□ 1.67
SMAD7-201ENST00000262158 BLMP54132 1417 aaPredicted RBP25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms