RNA–Protein interactions for RNA: ENST00000262059.8

CALCOCO1-201, Transcript of calcium binding and coiled-coil domain 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CALCOCO1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-201ENST00000262059 CLUAP1Q96AJ1 413 aa13.32□□□□□ -0.28
CALCOCO1-201ENST00000262059 CECR2Q9BXF3 1484 aa13.32□□□□□ -0.28
CALCOCO1-201ENST00000262059 KANK4Q5T7N3 995 aaPredicted RBP13.32□□□□□ -0.28
CALCOCO1-201ENST00000262059 MRE11P49959 708 aa13.31□□□□□ -0.28
CALCOCO1-201ENST00000262059 CENPQQ7L2Z9 268 aaPredicted RBP13.31□□□□□ -0.28
CALCOCO1-201ENST00000262059 ST18O60284 1047 aa13.31□□□□□ -0.28
CALCOCO1-201ENST00000262059 KIF16BQ96L93 1317 aa13.3□□□□□ -0.28
CALCOCO1-201ENST00000262059 GOLGA6L19H0YKK7 550 aa13.3□□□□□ -0.28
CALCOCO1-201ENST00000262059 RAB3GAP2Q9H2M9 1393 aa13.29□□□□□ -0.28
CALCOCO1-201ENST00000262059 CHMP5Q9NZZ3 219 aa13.29□□□□□ -0.28
CALCOCO1-201ENST00000262059 NASPP49321 788 aaPredicted RBP13.29□□□□□ -0.28
CALCOCO1-201ENST00000262059 ZMYND15Q9H091 742 aa13.29□□□□□ -0.28
CALCOCO1-201ENST00000262059 BAZ1AQ9NRL2 1556 aaPredicted RBP13.29□□□□□ -0.28
CALCOCO1-201ENST00000262059 CRBNQ96SW2 442 aa13.28□□□□□ -0.28
CALCOCO1-201ENST00000262059 FRAT2O75474 233 aaPredicted RBP13.28□□□□□ -0.28
CALCOCO1-201ENST00000262059 PRDM10Q9NQV6 1147 aa13.28□□□□□ -0.28
CALCOCO1-201ENST00000262059 CCDC9Q9Y3X0 531 aaKnown RBP13.28□□□□□ -0.28
CALCOCO1-201ENST00000262059 HDGFL2Q7Z4V5 671 aaPredicted RBP13.27□□□□□ -0.28
CALCOCO1-201ENST00000262059 IFT57Q9NWB7 429 aa13.27□□□□□ -0.28
CALCOCO1-201ENST00000262059 TRIM6-TRIM34B2RNG4 842 aa13.27□□□□□ -0.29
CALCOCO1-201ENST00000262059 HOMER1Q86YM7 354 aa13.27□□□□□ -0.29
CALCOCO1-201ENST00000262059 CWC15Q9P013 229 aaKnown RBP13.27□□□□□ -0.29
CALCOCO1-201ENST00000262059 BECN2A8MW95 431 aa13.27□□□□□ -0.29
CALCOCO1-201ENST00000262059 AEBP1Q8IUX7 1158 aa13.27□□□□□ -0.29
CALCOCO1-201ENST00000262059 ABCC8Q09428 1581 aa13.27□□□□□ -0.29
CALCOCO1-201ENST00000262059 RRP1P56182 461 aaKnown RBP13.26□□□□□ -0.29
CALCOCO1-201ENST00000262059 CCDC88BA6NC98 1476 aa13.26□□□□□ -0.29
CALCOCO1-201ENST00000262059 RALBP1Q15311 655 aa13.26□□□□□ -0.29
CALCOCO1-201ENST00000262059 DIAPH3Q9NSV4 1193 aa13.26□□□□□ -0.29
CALCOCO1-201ENST00000262059 CCDC39Q9UFE4 941 aa13.25□□□□□ -0.29
CALCOCO1-201ENST00000262059 ARGLU1Q9NWB6 273 aaPredicted RBP13.25□□□□□ -0.29
CALCOCO1-201ENST00000262059 SOX12O15370 315 aa13.24□□□□□ -0.29
CALCOCO1-201ENST00000262059 MCTP1Q6DN14 999 aa13.24□□□□□ -0.29
CALCOCO1-201ENST00000262059 RDXP35241 583 aaKnown RBP13.24□□□□□ -0.29
CALCOCO1-201ENST00000262059 ISY1Q9ULR0 285 aaKnown RBP13.24□□□□□ -0.29
CALCOCO1-201ENST00000262059 H0YHG0 523 aa13.23□□□□□ -0.29
CALCOCO1-201ENST00000262059 UQCRHLA0A096LP55 91 aa13.23□□□□□ -0.29
CALCOCO1-201ENST00000262059 UQCRHP07919 91 aa13.23□□□□□ -0.29
CALCOCO1-201ENST00000262059 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.23□□□□□ -0.29
CALCOCO1-201ENST00000262059 HSP90AB3PQ58FF7 597 aa13.23□□□□□ -0.29
CALCOCO1-201ENST00000262059 CHMP3Q9Y3E7 222 aa13.23□□□□□ -0.29
CALCOCO1-201ENST00000262059 CHMP4AQ9BY43 222 aa13.23□□□□□ -0.29
CALCOCO1-201ENST00000262059 SMC4Q9NTJ3 1288 aa13.23□□□□□ -0.29
CALCOCO1-201ENST00000262059 CCDC146Q8IYE0 955 aa13.22□□□□□ -0.29
CALCOCO1-201ENST00000262059 MNS1Q8NEH6 495 aa13.22□□□□□ -0.29
CALCOCO1-201ENST00000262059 RNF214Q8ND24 703 aa13.22□□□□□ -0.29
CALCOCO1-201ENST00000262059 ARHGAP35Q9NRY4 1499 aa13.22□□□□□ -0.29
CALCOCO1-201ENST00000262059 TRAK2O60296 914 aa13.22□□□□□ -0.29
CALCOCO1-201ENST00000262059 CENPJQ9HC77 1338 aaPredicted RBP13.21□□□□□ -0.29
CALCOCO1-201ENST00000262059 DCAF8L1A6NGE4 600 aa13.21□□□□□ -0.29
CALCOCO1-201ENST00000262059 EIF4G1Q04637 1599 aaKnown RBP13.21□□□□□ -0.29
CALCOCO1-201ENST00000262059 PES1O00541 588 aaKnown RBP13.21□□□□□ -0.3
CALCOCO1-201ENST00000262059 SAFB2Q14151 953 aaKnown RBP eCLIP13.21□□□□□ -0.3
CALCOCO1-201ENST00000262059 CCDC70Q6NSX1 233 aa13.2□□□□□ -0.3
CALCOCO1-201ENST00000262059 U2AF1L5P0DN76 240 aaPredicted RBP13.2□□□□□ -0.3
CALCOCO1-201ENST00000262059 U2AF1Q01081 240 aaKnown RBP eCLIP13.2□□□□□ -0.33e-6■■□□□ 12.1
CALCOCO1-201ENST00000262059 SF3A1Q15459 793 aaKnown RBP13.2□□□□□ -0.3
CALCOCO1-201ENST00000262059 PHF23Q9BUL5 403 aaPredicted RBP13.2□□□□□ -0.3
CALCOCO1-201ENST00000262059 ERICH4A6NGS2 130 aa13.2□□□□□ -0.3
CALCOCO1-201ENST00000262059 PDE3BQ13370 1112 aa13.2□□□□□ -0.3
CALCOCO1-201ENST00000262059 CCDC34Q96HJ3 373 aa13.19□□□□□ -0.3
CALCOCO1-201ENST00000262059 GPATCH3Q96I76 525 aa13.19□□□□□ -0.3
CALCOCO1-201ENST00000262059 ROCK2O75116 1388 aaKnown RBP13.19□□□□□ -0.3
CALCOCO1-201ENST00000262059 PKD2Q13563 968 aa13.19□□□□□ -0.3
CALCOCO1-201ENST00000262059 HSP90B2PQ58FF3 399 aa13.19□□□□□ -0.3
CALCOCO1-201ENST00000262059 CARMIL1Q5VZK9 1371 aa13.19□□□□□ -0.3
CALCOCO1-201ENST00000262059 PLCD4Q9BRC7 762 aa13.19□□□□□ -0.3
CALCOCO1-201ENST00000262059 SKIDA1Q1XH10 827 aa13.19□□□□□ -0.3
CALCOCO1-201ENST00000262059 RRP12Q5JTH9 1297 aaKnown RBP13.18□□□□□ -0.3
CALCOCO1-201ENST00000262059 ZHX1Q9UKY1 873 aaPredicted RBP13.18□□□□□ -0.3
CALCOCO1-201ENST00000262059 HDAC5Q9UQL6 1122 aa13.18□□□□□ -0.3
CALCOCO1-201ENST00000262059 ZBED9Q6R2W3 1325 aa13.18□□□□□ -0.3
CALCOCO1-201ENST00000262059 MSH5O43196 834 aa13.18□□□□□ -0.3
CALCOCO1-201ENST00000262059 FOXD1Q16676 465 aa13.18□□□□□ -0.3
CALCOCO1-201ENST00000262059 MROH2BQ7Z745 1585 aa13.18□□□□□ -0.3
CALCOCO1-201ENST00000262059 CCDC173Q0VFZ6 552 aa13.18□□□□□ -0.3
CALCOCO1-201ENST00000262059 DHX57Q6P158 1386 aaKnown RBP13.17□□□□□ -0.3
CALCOCO1-201ENST00000262059 EIF3AQ14152 1382 aaKnown RBP13.17□□□□□ -0.3
CALCOCO1-201ENST00000262059 TPD52L1Q16890 204 aaPredicted RBP13.17□□□□□ -0.3
CALCOCO1-201ENST00000262059 HMMRO75330 724 aa13.17□□□□□ -0.3
CALCOCO1-201ENST00000262059 STK26Q9P289 416 aa13.17□□□□□ -0.3
CALCOCO1-201ENST00000262059 STK31Q9BXU1 1019 aa13.16□□□□□ -0.3
CALCOCO1-201ENST00000262059 FBXW7Q969H0 707 aa13.16□□□□□ -0.3
CALCOCO1-201ENST00000262059 ATP6V1DQ9Y5K8 247 aa13.16□□□□□ -0.3
CALCOCO1-201ENST00000262059 LEKR1Q6ZMV7 388 aa13.16□□□□□ -0.3
CALCOCO1-201ENST00000262059 H3BQV1 296 aa13.16□□□□□ -0.3
CALCOCO1-201ENST00000262059 IFFO2Q5TF58 517 aa13.16□□□□□ -0.3
CALCOCO1-201ENST00000262059 AK7Q96M32 723 aa13.16□□□□□ -0.3
CALCOCO1-201ENST00000262059 SPAG9O60271 1321 aaKnown RBP13.15□□□□□ -0.3
CALCOCO1-201ENST00000262059 GORABQ5T7V8 394 aa13.15□□□□□ -0.3
CALCOCO1-201ENST00000262059 RUFY1Q96T51 708 aa13.15□□□□□ -0.3
CALCOCO1-201ENST00000262059 ACBD3Q9H3P7 528 aa13.15□□□□□ -0.3
CALCOCO1-201ENST00000262059 HMGN5P82970 282 aaKnown RBP13.15□□□□□ -0.3
CALCOCO1-201ENST00000262059 CUX2O14529 1486 aa13.15□□□□□ -0.3
CALCOCO1-201ENST00000262059 ANKRD45Q5TZF3 282 aa13.15□□□□□ -0.3
CALCOCO1-201ENST00000262059 CAVIN1Q6NZI2 390 aaKnown RBP13.15□□□□□ -0.31
CALCOCO1-201ENST00000262059 RASSF8Q8NHQ8 419 aa13.15□□□□□ -0.31
CALCOCO1-201ENST00000262059 TSR1Q2NL82 804 aaKnown RBP13.14□□□□□ -0.31
CALCOCO1-201ENST00000262059 CBX1P83916 185 aa13.14□□□□□ -0.31
CALCOCO1-201ENST00000262059 BCL2L13Q9BXK5 485 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms