RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 ROCK2O75116 1388 aaKnown RBP22.18■■□□□ 1.14
TM9SF1-201ENST00000261789 SAMD9LQ8IVG5 1584 aa22.18■■□□□ 1.14
TM9SF1-201ENST00000261789 ERCC6L2Q5T890 1561 aa22.17■■□□□ 1.14
TM9SF1-201ENST00000261789 CDC42BPBQ9Y5S2 1711 aa22.16■■□□□ 1.14
TM9SF1-201ENST00000261789 FANCIQ9NVI1 1328 aa22.15■■□□□ 1.14
TM9SF1-201ENST00000261789 FAM135AQ9P2D6 1515 aa22.15■■□□□ 1.14
TM9SF1-201ENST00000261789 CCDC141Q6ZP82 1450 aa22.15■■□□□ 1.14
TM9SF1-201ENST00000261789 NBPF1Q3BBV0 1214 aa22.15■■□□□ 1.14
TM9SF1-201ENST00000261789 ARHGEF5Q12774 1597 aa22.14■■□□□ 1.14
TM9SF1-201ENST00000261789 SALL2Q9Y467 1007 aaPredicted RBP22.11■■□□□ 1.13
TM9SF1-201ENST00000261789 CCDC144AA2RUR9 1427 aa22.1■■□□□ 1.13
TM9SF1-201ENST00000261789 SYCP2Q9BX26 1530 aa22.1■■□□□ 1.13
TM9SF1-201ENST00000261789 PREX2Q70Z35 1606 aa22.09■■□□□ 1.13
TM9SF1-201ENST00000261789 MYBBP1AQ9BQG0 1328 aaKnown RBP22.08■■□□□ 1.13
TM9SF1-201ENST00000261789 ARHGAP5Q13017 1502 aa22.06■■□□□ 1.12
TM9SF1-201ENST00000261789 PRAG1Q86YV5 1406 aa22.06■■□□□ 1.12
TM9SF1-201ENST00000261789 RNF123Q5XPI4 1314 aa22.06■■□□□ 1.12
TM9SF1-201ENST00000261789 TTC37Q6PGP7 1564 aa22.06■■□□□ 1.12
TM9SF1-201ENST00000261789 PLA2R1Q13018 1463 aa22.06■■□□□ 1.12
TM9SF1-201ENST00000261789 RSPH4AQ5TD94 716 aa22.05■■□□□ 1.12
TM9SF1-201ENST00000261789 RALBP1Q15311 655 aa22.05■■□□□ 1.12
TM9SF1-201ENST00000261789 CCDC136Q96JN2 1154 aa22.04■■□□□ 1.12
TM9SF1-201ENST00000261789 LRPPRCP42704 1394 aaKnown RBP22.04■■□□□ 1.12
TM9SF1-201ENST00000261789 BRD4O60885 1362 aaPredicted RBP22.03■■□□□ 1.12
TM9SF1-201ENST00000261789 PLEKHH2Q8IVE3 1493 aa22.02■■□□□ 1.12
TM9SF1-201ENST00000261789 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.02■■□□□ 1.12
TM9SF1-201ENST00000261789 TRPM1Q7Z4N2 1603 aa22.02■■□□□ 1.12
TM9SF1-201ENST00000261789 E9PCH4 1651 aa22.01■■□□□ 1.11
TM9SF1-201ENST00000261789 ERICH6Q7L0X2 663 aa22.01■■□□□ 1.11
TM9SF1-201ENST00000261789 A2MP01023 1474 aa22.01■■□□□ 1.11
TM9SF1-201ENST00000261789 ABCC2Q92887 1545 aa22■■□□□ 1.11
TM9SF1-201ENST00000261789 CC2D1BQ5T0F9 858 aaKnown RBP22■■□□□ 1.11
TM9SF1-201ENST00000261789 PER1O15534 1290 aaPredicted RBP21.99■■□□□ 1.11
TM9SF1-201ENST00000261789 DISP3Q9P2K9 1392 aa21.98■■□□□ 1.11
TM9SF1-201ENST00000261789 KTN1Q86UP2 1357 aaKnown RBP21.97■■□□□ 1.11
TM9SF1-201ENST00000261789 NLRP13Q86W25 1043 aa21.97■■□□□ 1.11
TM9SF1-201ENST00000261789 TESK2Q96S53 571 aa21.96■■□□□ 1.11
TM9SF1-201ENST00000261789 PARD3Q8TEW0 1356 aa21.95■■□□□ 1.1
TM9SF1-201ENST00000261789 UNC13BO14795 1591 aa21.95■■□□□ 1.1
TM9SF1-201ENST00000261789 PANK3Q9H999 370 aa21.93■■□□□ 1.1
TM9SF1-201ENST00000261789 GPRASP1Q5JY77 1395 aa21.92■■□□□ 1.1
TM9SF1-201ENST00000261789 UHRF1BP1LA0JNW5 1464 aa21.92■■□□□ 1.1
TM9SF1-201ENST00000261789 MAST1Q9Y2H9 1570 aa21.91■■□□□ 1.1
TM9SF1-201ENST00000261789 CDCA7LQ96GN5 454 aa21.91■■□□□ 1.1
TM9SF1-201ENST00000261789 MYO5CQ9NQX4 1742 aa21.9■■□□□ 1.1
TM9SF1-201ENST00000261789 RRP1P56182 461 aaKnown RBP21.89■■□□□ 1.1
TM9SF1-201ENST00000261789 EXOC6Q8TAG9 804 aa21.89■■□□□ 1.1
TM9SF1-201ENST00000261789 COL17A1Q9UMD9 1497 aaPredicted RBP21.89■■□□□ 1.09
TM9SF1-201ENST00000261789 IQGAP3Q86VI3 1631 aa21.89■■□□□ 1.09
TM9SF1-201ENST00000261789 RCAN3Q9UKA8 241 aa21.88■■□□□ 1.09
TM9SF1-201ENST00000261789 PRDM15P57071 1507 aaPredicted RBP21.88■■□□□ 1.09
TM9SF1-201ENST00000261789 ERBINQ96RT1 1412 aa21.87■■□□□ 1.09
TM9SF1-201ENST00000261789 PLXNC1O60486 1568 aa21.86■■□□□ 1.09
TM9SF1-201ENST00000261789 ZCCHC11Q5TAX3 1644 aaKnown RBP21.86■■□□□ 1.09
TM9SF1-201ENST00000261789 DUOX2Q9NRD8 1548 aa21.85■■□□□ 1.09
TM9SF1-201ENST00000261789 TMF1P82094 1093 aa21.85■■□□□ 1.09
TM9SF1-201ENST00000261789 TRAPPC8Q9Y2L5 1435 aa21.84■■□□□ 1.09
TM9SF1-201ENST00000261789 EFCAB2Q5VUJ9 269 aa21.83■■□□□ 1.09
TM9SF1-201ENST00000261789 PAK3O75914 559 aaPredicted RBP21.83■■□□□ 1.08
TM9SF1-201ENST00000261789 AFAP1Q8N556 730 aa21.82■■□□□ 1.08
TM9SF1-201ENST00000261789 PLCH2O75038 1416 aa21.82■■□□□ 1.08
TM9SF1-201ENST00000261789 PLIN1O60240 522 aa21.81■■□□□ 1.08
TM9SF1-201ENST00000261789 OSCARQ8IYS5 282 aa21.81■■□□□ 1.08
TM9SF1-201ENST00000261789 ATP10AO60312 1499 aa21.79■■□□□ 1.08
TM9SF1-201ENST00000261789 MAGI2Q86UL8 1455 aa21.79■■□□□ 1.08
TM9SF1-201ENST00000261789 LAMC1P11047 1609 aa21.79■■□□□ 1.08
TM9SF1-201ENST00000261789 NOP58Q9Y2X3 529 aaKnown RBP21.78■■□□□ 1.08
TM9SF1-201ENST00000261789 EIF2AK4Q9P2K8 1649 aaKnown RBP21.77■■□□□ 1.08
TM9SF1-201ENST00000261789 WASHC2CQ9Y4E1 1318 aa21.77■■□□□ 1.08
TM9SF1-201ENST00000261789 PDE3BQ13370 1112 aa21.77■■□□□ 1.08
TM9SF1-201ENST00000261789 SPAG9O60271 1321 aaKnown RBP21.75■■□□□ 1.07
TM9SF1-201ENST00000261789 ADAMTS8Q9UP79 889 aa21.75■■□□□ 1.07
TM9SF1-201ENST00000261789 ABCC1P33527 1531 aa21.74■■□□□ 1.07
TM9SF1-201ENST00000261789 BLMP54132 1417 aaPredicted RBP21.72■■□□□ 1.07
TM9SF1-201ENST00000261789 NBR1Q14596 966 aa21.71■■□□□ 1.07
TM9SF1-201ENST00000261789 BCL11AQ9H165 835 aa21.71■■□□□ 1.07
TM9SF1-201ENST00000261789 ANP32AP39687 249 aaKnown RBP21.71■■□□□ 1.07
TM9SF1-201ENST00000261789 KNSTRNQ9Y448 316 aa21.71■■□□□ 1.07
TM9SF1-201ENST00000261789 WDR7Q9Y4E6 1490 aa21.71■■□□□ 1.07
TM9SF1-201ENST00000261789 RNF17Q9BXT8 1623 aaKnown RBP21.7■■□□□ 1.06
TM9SF1-201ENST00000261789 SKAP1Q86WV1 359 aa21.7■■□□□ 1.06
TM9SF1-201ENST00000261789 PPP2R1AP30153 589 aa21.68■■□□□ 1.06
TM9SF1-201ENST00000261789 IPO9Q96P70 1041 aaKnown RBP21.68■■□□□ 1.06
TM9SF1-201ENST00000261789 MYT1LQ9UL68 1186 aa21.68■■□□□ 1.06
TM9SF1-201ENST00000261789 MADDQ8WXG6 1647 aa21.68■■□□□ 1.06
TM9SF1-201ENST00000261789 NPM2Q86SE8 214 aaKnown RBP21.67■■□□□ 1.06
TM9SF1-201ENST00000261789 AMER1Q5JTC6 1135 aaPredicted RBP21.67■■□□□ 1.06
TM9SF1-201ENST00000261789 CRBNQ96SW2 442 aa21.66■■□□□ 1.06
TM9SF1-201ENST00000261789 C20orf194Q5TEA3 1177 aa21.66■■□□□ 1.06
TM9SF1-201ENST00000261789 KIF3BO15066 747 aa21.64■■□□□ 1.05
TM9SF1-201ENST00000261789 CLTCL1P53675 1640 aa21.63■■□□□ 1.05
TM9SF1-201ENST00000261789 WDR43Q15061 677 aaKnown RBP eCLIP21.63■■□□□ 1.05
TM9SF1-201ENST00000261789 ZFYVE16Q7Z3T8 1539 aa21.63■■□□□ 1.05
TM9SF1-201ENST00000261789 IQGAP1P46940 1657 aa21.63■■□□□ 1.05
TM9SF1-201ENST00000261789 TRPM2O94759 1503 aa21.63■■□□□ 1.05
TM9SF1-201ENST00000261789 PLEKHH1Q9ULM0 1364 aa21.62■■□□□ 1.05
TM9SF1-201ENST00000261789 ZMYM4Q5VZL5 1548 aa21.62■■□□□ 1.05
TM9SF1-201ENST00000261789 ZBTB47Q9UFB7 747 aaPredicted RBP21.62■■□□□ 1.05
TM9SF1-201ENST00000261789 TCERG1O14776 1098 aaKnown RBP21.61■■□□□ 1.05
TM9SF1-201ENST00000261789 PDE4AP27815 886 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms