RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 PPP4R3BQ5MIZ7 849 aa16.31■□□□□ 0.2
TMEM260-201ENST00000261556 TRERF1Q96PN7 1200 aa16.31■□□□□ 0.2
TMEM260-201ENST00000261556 CHAF1AQ13111 956 aaPredicted RBP16.3■□□□□ 0.2
TMEM260-201ENST00000261556 JPH4Q96JJ6 628 aa16.3■□□□□ 0.2
TMEM260-201ENST00000261556 CC2D1BQ5T0F9 858 aaKnown RBP16.29■□□□□ 0.2
TMEM260-201ENST00000261556 ATAD2BQ9ULI0 1458 aa16.29■□□□□ 0.2
TMEM260-201ENST00000261556 IPO4Q8TEX9 1081 aaKnown RBP16.29■□□□□ 0.2
TMEM260-201ENST00000261556 GBP4Q96PP9 640 aa16.28■□□□□ 0.2
TMEM260-201ENST00000261556 NASPP49321 788 aaPredicted RBP16.27■□□□□ 0.2
TMEM260-201ENST00000261556 XPCQ01831 940 aaPredicted RBP16.27■□□□□ 0.2
TMEM260-201ENST00000261556 CERS3Q8IU89 383 aa16.26■□□□□ 0.19
TMEM260-201ENST00000261556 SMAP1Q8IYB5 467 aaPredicted RBP16.26■□□□□ 0.19
TMEM260-201ENST00000261556 KANK1Q14678 1352 aa16.26■□□□□ 0.19
TMEM260-201ENST00000261556 PATL2C9JE40 543 aaKnown RBP16.26■□□□□ 0.19
TMEM260-201ENST00000261556 IRX3P78415 501 aaPredicted RBP16.26■□□□□ 0.19
TMEM260-201ENST00000261556 KIAA2012Q0VF49 1180 aa16.26■□□□□ 0.19
TMEM260-201ENST00000261556 DDX11L8A8MPP1 907 aa16.25■□□□□ 0.19
TMEM260-201ENST00000261556 SOX12O15370 315 aa16.25■□□□□ 0.19
TMEM260-201ENST00000261556 KCNJ4P48050 445 aa16.25■□□□□ 0.19
TMEM260-201ENST00000261556 MPNDQ8N594 471 aa16.25■□□□□ 0.19
TMEM260-201ENST00000261556 SPDYE4A6NLX3 237 aa16.24■□□□□ 0.19
TMEM260-201ENST00000261556 U2SURPO15042 1029 aaKnown RBP16.24■□□□□ 0.19
TMEM260-201ENST00000261556 DDX49Q9Y6V7 483 aaKnown RBP16.24■□□□□ 0.19
TMEM260-201ENST00000261556 MFAP1P55081 439 aaKnown RBP16.24■□□□□ 0.19
TMEM260-201ENST00000261556 TMF1P82094 1093 aa16.24■□□□□ 0.19
TMEM260-201ENST00000261556 STK26Q9P289 416 aa16.24■□□□□ 0.19
TMEM260-201ENST00000261556 SRPK2P78362 688 aaKnown RBP16.23■□□□□ 0.19
TMEM260-201ENST00000261556 FMN1Q68DA7 1419 aa16.23■□□□□ 0.19
TMEM260-201ENST00000261556 SETD5Q9C0A6 1442 aa16.23■□□□□ 0.19
TMEM260-201ENST00000261556 ZSCAN30Q86W11 494 aa16.23■□□□□ 0.19
TMEM260-201ENST00000261556 MAPK8IP3Q9UPT6 1336 aa16.23■□□□□ 0.19
TMEM260-201ENST00000261556 STAC3Q96MF2 364 aa16.22■□□□□ 0.19
TMEM260-201ENST00000261556 ARHGAP35Q9NRY4 1499 aa16.22■□□□□ 0.19
TMEM260-201ENST00000261556 PTMSP20962 102 aa16.22■□□□□ 0.19
TMEM260-201ENST00000261556 MCM4P33991 863 aa16.22■□□□□ 0.19
TMEM260-201ENST00000261556 KIF3BO15066 747 aa16.22■□□□□ 0.19
TMEM260-201ENST00000261556 HNRNPMP52272 730 aaKnown RBP eCLIP16.22■□□□□ 0.19
TMEM260-201ENST00000261556 NUP155O75694 1391 aa16.21■□□□□ 0.19
TMEM260-201ENST00000261556 GTF2E1P29083 439 aaPredicted RBP16.21■□□□□ 0.19
TMEM260-201ENST00000261556 FTSJ3Q8IY81 847 aaKnown RBP16.21■□□□□ 0.18
TMEM260-201ENST00000261556 FHOD3Q2V2M9 1422 aa16.21■□□□□ 0.18
TMEM260-201ENST00000261556 MPHOSPH9Q99550 1183 aa16.2■□□□□ 0.18
TMEM260-201ENST00000261556 TOP2AP11388 1531 aaKnown RBP16.2■□□□□ 0.18
TMEM260-201ENST00000261556 CSPP1Q1MSJ5 1256 aa16.2■□□□□ 0.18
TMEM260-201ENST00000261556 HDGFP51858 240 aaKnown RBP16.2■□□□□ 0.18
TMEM260-201ENST00000261556 ERICH4A6NGS2 130 aa16.19■□□□□ 0.18
TMEM260-201ENST00000261556 CHMP5Q9NZZ3 219 aa16.19■□□□□ 0.18
TMEM260-201ENST00000261556 CENPQQ7L2Z9 268 aaPredicted RBP16.19■□□□□ 0.18
TMEM260-201ENST00000261556 ZFP91Q96JP5 570 aaPredicted RBP16.18■□□□□ 0.18
TMEM260-201ENST00000261556 CCDC173Q0VFZ6 552 aa16.16■□□□□ 0.18
TMEM260-201ENST00000261556 RAPGEF2Q9Y4G8 1499 aa16.16■□□□□ 0.18
TMEM260-201ENST00000261556 CCDC66A2RUB6 948 aa16.14■□□□□ 0.17
TMEM260-201ENST00000261556 PRDM4Q9UKN5 801 aa16.14■□□□□ 0.17
TMEM260-201ENST00000261556 KTN1Q86UP2 1357 aaKnown RBP16.13■□□□□ 0.17
TMEM260-201ENST00000261556 CYB5RLQ6IPT4 315 aa16.13■□□□□ 0.17
TMEM260-201ENST00000261556 ANKRD30AQ9BXX3 1397 aa16.13■□□□□ 0.17
TMEM260-201ENST00000261556 RUSC2Q8N2Y8 1516 aa16.12■□□□□ 0.17
TMEM260-201ENST00000261556 RNF214Q8ND24 703 aa16.12■□□□□ 0.17
TMEM260-201ENST00000261556 TAF3Q5VWG9 929 aa16.12■□□□□ 0.17
TMEM260-201ENST00000261556 SPAG9O60271 1321 aaKnown RBP16.12■□□□□ 0.17
TMEM260-201ENST00000261556 ZBTB22O15209 634 aa16.11■□□□□ 0.17
TMEM260-201ENST00000261556 MORC1Q86VD1 984 aa16.11■□□□□ 0.17
TMEM260-201ENST00000261556 DNAJC5BQ9UF47 199 aa16.11■□□□□ 0.17
TMEM260-201ENST00000261556 FANCD2Q9BXW9 1451 aa16.1■□□□□ 0.17
TMEM260-201ENST00000261556 LETM1O95202 739 aaPredicted RBP16.1■□□□□ 0.17
TMEM260-201ENST00000261556 BRD2P25440 801 aaKnown RBP16.1■□□□□ 0.17
TMEM260-201ENST00000261556 FAM177BA6PVY3 158 aa16.1■□□□□ 0.17
TMEM260-201ENST00000261556 CDCA7LQ96GN5 454 aa16.09■□□□□ 0.17
TMEM260-201ENST00000261556 L3MBTL2Q969R5 705 aa16.09■□□□□ 0.17
TMEM260-201ENST00000261556 CCDC94Q9BW85 323 aaPredicted RBP16.09■□□□□ 0.17
TMEM260-201ENST00000261556 OFD1O75665 1012 aa16.08■□□□□ 0.17
TMEM260-201ENST00000261556 FOXD4L5Q5VV16 416 aaPredicted RBP16.08■□□□□ 0.16
TMEM260-201ENST00000261556 FOXD4L4Q8WXT5 416 aaPredicted RBP16.08■□□□□ 0.16
TMEM260-201ENST00000261556 WDR97A6NE52 1622 aa16.08■□□□□ 0.16
TMEM260-201ENST00000261556 SKOR2Q2VWA4 1001 aaPredicted RBP16.08■□□□□ 0.16
TMEM260-201ENST00000261556 NUTM2DQ5VT03 806 aaPredicted RBP16.08■□□□□ 0.16
TMEM260-201ENST00000261556 DYNC1I1O14576 645 aa16.08■□□□□ 0.16
TMEM260-201ENST00000261556 PDCL2Q8N4E4 241 aa16.08■□□□□ 0.16
TMEM260-201ENST00000261556 ZBTB9Q96C00 473 aa16.08■□□□□ 0.16
TMEM260-201ENST00000261556 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.07■□□□□ 0.16
TMEM260-201ENST00000261556 ZNF526Q8TF50 670 aaPredicted RBP16.07■□□□□ 0.16
TMEM260-201ENST00000261556 WWC1Q8IX03 1113 aa16.06■□□□□ 0.16
TMEM260-201ENST00000261556 ZNF830Q96NB3 372 aaPredicted RBP16.06■□□□□ 0.16
TMEM260-201ENST00000261556 SMG6Q86US8 1419 aaKnown RBP16.06■□□□□ 0.16
TMEM260-201ENST00000261556 TRIM6-TRIM34B2RNG4 842 aa16.06■□□□□ 0.16
TMEM260-201ENST00000261556 KIF20AO95235 890 aa16.06■□□□□ 0.16
TMEM260-201ENST00000261556 RSPH4AQ5TD94 716 aa16.06■□□□□ 0.16
TMEM260-201ENST00000261556 TRIM34Q9BYJ4 488 aa16.06■□□□□ 0.16
TMEM260-201ENST00000261556 SASS6Q6UVJ0 657 aa16.05■□□□□ 0.16
TMEM260-201ENST00000261556 TSC1Q92574 1164 aa16.05■□□□□ 0.16
TMEM260-201ENST00000261556 GTPBP4Q9BZE4 634 aaKnown RBP16.05■□□□□ 0.16
TMEM260-201ENST00000261556 NCAPD3P42695 1498 aa16.05■□□□□ 0.16
TMEM260-201ENST00000261556 CC2D2AQ9P2K1 1620 aa16.05■□□□□ 0.16
TMEM260-201ENST00000261556 DMTNQ08495 405 aa16.05■□□□□ 0.16
TMEM260-201ENST00000261556 CENPJQ9HC77 1338 aaPredicted RBP16.04■□□□□ 0.16
TMEM260-201ENST00000261556 RBM25P49756 843 aaKnown RBP16.04■□□□□ 0.16
TMEM260-201ENST00000261556 CAVIN1Q6NZI2 390 aaKnown RBP16.04■□□□□ 0.16
TMEM260-201ENST00000261556 TNNT1P13805 278 aa16.03■□□□□ 0.16
TMEM260-201ENST00000261556 PTPRGP23470 1445 aa16.03■□□□□ 0.16
TMEM260-201ENST00000261556 GPATCH11Q8N954 259 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms