RNA–Protein interactions for RNA: ENST00000259154.8

KCTD3-201, Transcript of potassium channel tetramerization domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCTD3, Length 3,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-201ENST00000259154 ANP32BQ92688 251 aaKnown RBP19.37■□□□□ 0.69
KCTD3-201ENST00000259154 CHD1O14646 1710 aa19.37■□□□□ 0.69
KCTD3-201ENST00000259154 NUP153P49790 1475 aaKnown RBP19.36■□□□□ 0.69
KCTD3-201ENST00000259154 TNNT2P45379 298 aaPredicted RBP19.36■□□□□ 0.69
KCTD3-201ENST00000259154 ANKRD30BQ9BXX2 1392 aa19.36■□□□□ 0.69
KCTD3-201ENST00000259154 CCDC7Q96M83 1385 aa19.36■□□□□ 0.69
KCTD3-201ENST00000259154 NCLP19338 710 aaKnown RBP19.35■□□□□ 0.69
KCTD3-201ENST00000259154 BECN1Q14457 450 aa19.33■□□□□ 0.68
KCTD3-201ENST00000259154 SLC24A1O60721 1099 aa19.32■□□□□ 0.68
KCTD3-201ENST00000259154 VSIG10Q8N0Z9 540 aa19.32■□□□□ 0.68
KCTD3-201ENST00000259154 HNRNPMP52272 730 aaKnown RBP eCLIP19.32■□□□□ 0.682e-8■■■■■ 36.5
KCTD3-201ENST00000259154 GSE1Q14687 1217 aa19.32■□□□□ 0.68
KCTD3-201ENST00000259154 ABCA8O94911 1581 aa19.32■□□□□ 0.68
KCTD3-201ENST00000259154 TCERG1O14776 1098 aaKnown RBP19.31■□□□□ 0.68
KCTD3-201ENST00000259154 GCC2Q8IWJ2 1684 aa19.31■□□□□ 0.68
KCTD3-201ENST00000259154 CNTLNQ9NXG0 1405 aa19.3■□□□□ 0.68
KCTD3-201ENST00000259154 JPH4Q96JJ6 628 aa19.29■□□□□ 0.68
KCTD3-201ENST00000259154 DCAF11Q8TEB1 546 aa19.29■□□□□ 0.68
KCTD3-201ENST00000259154 MIA2Q96PC5 1412 aa19.27■□□□□ 0.68
KCTD3-201ENST00000259154 AKNAQ7Z591 1439 aa19.26■□□□□ 0.67
KCTD3-201ENST00000259154 NPM1P06748 294 aaKnown RBP eCLIP19.26■□□□□ 0.67
KCTD3-201ENST00000259154 NCOA1Q15788 1441 aa19.25■□□□□ 0.67
KCTD3-201ENST00000259154 KIF14Q15058 1648 aa19.24■□□□□ 0.67
KCTD3-201ENST00000259154 RPRD2Q5VT52 1461 aaKnown RBP19.24■□□□□ 0.67
KCTD3-201ENST00000259154 ZBED9Q6R2W3 1325 aa19.24■□□□□ 0.67
KCTD3-201ENST00000259154 AMER1Q5JTC6 1135 aaPredicted RBP19.23■□□□□ 0.67
KCTD3-201ENST00000259154 PNNQ9H307 717 aaKnown RBP19.23■□□□□ 0.67
KCTD3-201ENST00000259154 TEX14Q8IWB6 1497 aa19.23■□□□□ 0.67
KCTD3-201ENST00000259154 NFKBIBQ15653 356 aa19.22■□□□□ 0.67
KCTD3-201ENST00000259154 CAMSAP2Q08AD1 1489 aa19.22■□□□□ 0.67
KCTD3-201ENST00000259154 CRBNQ96SW2 442 aa19.22■□□□□ 0.67
KCTD3-201ENST00000259154 NUP155O75694 1391 aa19.21■□□□□ 0.67
KCTD3-201ENST00000259154 PZPP20742 1482 aa19.21■□□□□ 0.67
KCTD3-201ENST00000259154 CROCC2H7BZ55 1655 aa19.2■□□□□ 0.66
KCTD3-201ENST00000259154 USP47Q96K76 1375 aa19.19■□□□□ 0.66
KCTD3-201ENST00000259154 ST20-MTHFSA0A0A6YYL1 179 aa19.19■□□□□ 0.66
KCTD3-201ENST00000259154 CLASP1Q7Z460 1538 aa19.19■□□□□ 0.66
KCTD3-201ENST00000259154 GPATCH8Q9UKJ3 1502 aaKnown RBP19.18■□□□□ 0.66
KCTD3-201ENST00000259154 FOXD4L1Q9NU39 408 aa19.18■□□□□ 0.66
KCTD3-201ENST00000259154 CLUAP1Q96AJ1 413 aa19.18■□□□□ 0.66
KCTD3-201ENST00000259154 CDCA7LQ96GN5 454 aa19.18■□□□□ 0.66
KCTD3-201ENST00000259154 FRAT2O75474 233 aaPredicted RBP19.17■□□□□ 0.66
KCTD3-201ENST00000259154 RRP1P56182 461 aaKnown RBP19.17■□□□□ 0.66
KCTD3-201ENST00000259154 CCDC146Q8IYE0 955 aa19.17■□□□□ 0.66
KCTD3-201ENST00000259154 KNSTRNQ9Y448 316 aa19.17■□□□□ 0.66
KCTD3-201ENST00000259154 DNMT1P26358 1616 aaKnown RBP19.17■□□□□ 0.66
KCTD3-201ENST00000259154 CDC42BPAQ5VT25 1732 aa19.16■□□□□ 0.66
KCTD3-201ENST00000259154 TROQ12816 1431 aaPredicted RBP19.16■□□□□ 0.66
KCTD3-201ENST00000259154 SPATA31E1Q6ZUB1 1445 aa19.15■□□□□ 0.66
KCTD3-201ENST00000259154 ROCK1Q13464 1354 aa19.13■□□□□ 0.65
KCTD3-201ENST00000259154 ANKRD50Q9ULJ7 1429 aa19.12■□□□□ 0.65
KCTD3-201ENST00000259154 ITSN2Q9NZM3 1697 aa19.12■□□□□ 0.65
KCTD3-201ENST00000259154 NBPF1Q3BBV0 1214 aa19.12■□□□□ 0.65
KCTD3-201ENST00000259154 BCORL1Q5H9F3 1711 aa19.11■□□□□ 0.65
KCTD3-201ENST00000259154 DNTTIP2Q5QJE6 756 aaKnown RBP19.1■□□□□ 0.65
KCTD3-201ENST00000259154 BCL2L13Q9BXK5 485 aa19.1■□□□□ 0.65
KCTD3-201ENST00000259154 ABCC10Q5T3U5 1492 aa19.1■□□□□ 0.65
KCTD3-201ENST00000259154 CARMIL2Q6F5E8 1435 aa19.1■□□□□ 0.65
KCTD3-201ENST00000259154 USP35Q9P2H5 1018 aa19.09■□□□□ 0.65
KCTD3-201ENST00000259154 DHX29Q7Z478 1369 aaKnown RBP19.09■□□□□ 0.65
KCTD3-201ENST00000259154 PLPPR3Q6T4P5 718 aa19.09■□□□□ 0.65
KCTD3-201ENST00000259154 ERCC6L2Q5T890 1561 aa19.09■□□□□ 0.65
KCTD3-201ENST00000259154 PLCB2Q00722 1185 aa19.08■□□□□ 0.65
KCTD3-201ENST00000259154 KIAA1107Q9UPP5 1409 aa19.08■□□□□ 0.65
KCTD3-201ENST00000259154 ANKRD30AQ9BXX3 1397 aa19.08■□□□□ 0.65
KCTD3-201ENST00000259154 HSP90AA2PQ14568 343 aaPredicted RBP19.08■□□□□ 0.64
KCTD3-201ENST00000259154 FTSJ3Q8IY81 847 aaKnown RBP19.07■□□□□ 0.64
KCTD3-201ENST00000259154 ADGBQ8N7X0 1667 aa19.06■□□□□ 0.64
KCTD3-201ENST00000259154 MFAP1P55081 439 aaKnown RBP19.06■□□□□ 0.64
KCTD3-201ENST00000259154 PTMAP06454 111 aaKnown RBP19.05■□□□□ 0.64
KCTD3-201ENST00000259154 HSP90AB1P08238 724 aaKnown RBP19.04■□□□□ 0.64
KCTD3-201ENST00000259154 ATP10BO94823 1461 aa19.04■□□□□ 0.64
KCTD3-201ENST00000259154 GOLGA6L3A6NEY3 463 aa19.04■□□□□ 0.64
KCTD3-201ENST00000259154 C9orf84Q5VXU9 1444 aa19.03■□□□□ 0.64
KCTD3-201ENST00000259154 L1TD1Q5T7N2 865 aaKnown RBP19.03■□□□□ 0.64
KCTD3-201ENST00000259154 STAG3Q9UJ98 1225 aa19.03■□□□□ 0.64
KCTD3-201ENST00000259154 KIF15Q9NS87 1388 aa19.03■□□□□ 0.64
KCTD3-201ENST00000259154 CDC42BPBQ9Y5S2 1711 aa19.03■□□□□ 0.64
KCTD3-201ENST00000259154 PNISRQ8TF01 805 aaKnown RBP19■□□□□ 0.63
KCTD3-201ENST00000259154 RRP7AQ9Y3A4 280 aaKnown RBP19■□□□□ 0.63
KCTD3-201ENST00000259154 RSPH6AQ9H0K4 717 aa19■□□□□ 0.63
KCTD3-201ENST00000259154 FAM161AQ3B820 660 aa18.98■□□□□ 0.63
KCTD3-201ENST00000259154 ROCK2O75116 1388 aaKnown RBP18.98■□□□□ 0.63
KCTD3-201ENST00000259154 PREX2Q70Z35 1606 aa18.98■□□□□ 0.63
KCTD3-201ENST00000259154 COG6Q9Y2V7 657 aa18.97■□□□□ 0.63
KCTD3-201ENST00000259154 APBB1O00213 710 aa18.97■□□□□ 0.63
KCTD3-201ENST00000259154 BACH2Q9BYV9 841 aa18.97■□□□□ 0.63
KCTD3-201ENST00000259154 ADGRL2O95490 1459 aa18.97■□□□□ 0.63
KCTD3-201ENST00000259154 GOLGA6L22H0YM25 854 aa18.96■□□□□ 0.63
KCTD3-201ENST00000259154 NLRP13Q86W25 1043 aa18.96■□□□□ 0.63
KCTD3-201ENST00000259154 MYH16Q9H6N6 1097 aa18.96■□□□□ 0.63
KCTD3-201ENST00000259154 KTN1Q86UP2 1357 aaKnown RBP18.96■□□□□ 0.63
KCTD3-201ENST00000259154 HSCBQ8IWL3 235 aa18.95■□□□□ 0.62
KCTD3-201ENST00000259154 MBD5Q9P267 1494 aa18.94■□□□□ 0.62
KCTD3-201ENST00000259154 PTPRGP23470 1445 aa18.93■□□□□ 0.62
KCTD3-201ENST00000259154 U2SURPO15042 1029 aaKnown RBP18.93■□□□□ 0.62
KCTD3-201ENST00000259154 MSNP26038 577 aaKnown RBP18.92■□□□□ 0.62
KCTD3-201ENST00000259154 FOXD4L5Q5VV16 416 aaPredicted RBP18.92■□□□□ 0.62
KCTD3-201ENST00000259154 FOXD4L4Q8WXT5 416 aaPredicted RBP18.92■□□□□ 0.62
KCTD3-201ENST00000259154 PKNOX2Q96KN3 472 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms