RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 PCDHGA10Q9Y5H3 936 aa13.43□□□□□ -0.26
TRA2B-201ENST00000259043 RGS20O76081 388 aa13.41□□□□□ -0.26
TRA2B-201ENST00000259043 RABGEF1Q9UJ41 708 aa13.4□□□□□ -0.26
TRA2B-201ENST00000259043 FBXW7Q969H0 707 aa13.39□□□□□ -0.27
TRA2B-201ENST00000259043 PHF14O94880 888 aa13.38□□□□□ -0.27
TRA2B-201ENST00000259043 TYW1BQ6NUM6 668 aa13.37□□□□□ -0.27
TRA2B-201ENST00000259043 COL9A1P20849 921 aa13.35□□□□□ -0.27
TRA2B-201ENST00000259043 PROX2Q3B8N5 592 aa13.35□□□□□ -0.27
TRA2B-201ENST00000259043 A0A0G2JS52 829 aa13.34□□□□□ -0.27
TRA2B-201ENST00000259043 ANKK1Q8NFD2 765 aa13.33□□□□□ -0.28
TRA2B-201ENST00000259043 CAMK2BQ13554 666 aa13.31□□□□□ -0.28
TRA2B-201ENST00000259043 LAPTM4BQ86VI4 370 aa13.31□□□□□ -0.28
TRA2B-201ENST00000259043 EPAS1Q99814 870 aa13.29□□□□□ -0.28
TRA2B-201ENST00000259043 ONECUT3O60422 494 aaPredicted RBP13.28□□□□□ -0.28
TRA2B-201ENST00000259043 PLCB2Q00722 1185 aa13.26□□□□□ -0.29
TRA2B-201ENST00000259043 C6orf132Q5T0Z8 1188 aa13.26□□□□□ -0.29
TRA2B-201ENST00000259043 KIAA1468Q9P260 1216 aa13.26□□□□□ -0.29
TRA2B-201ENST00000259043 SOWAHBA6NEL2 793 aa13.25□□□□□ -0.29
TRA2B-201ENST00000259043 DPYSL4O14531 572 aa13.25□□□□□ -0.29
TRA2B-201ENST00000259043 ITGBL1O95965 494 aaPredicted RBP13.25□□□□□ -0.29
TRA2B-201ENST00000259043 BCAMP50895 628 aa13.24□□□□□ -0.29
TRA2B-201ENST00000259043 ZFRQ96KR1 1074 aaKnown RBP13.24□□□□□ -0.29
TRA2B-201ENST00000259043 IRX2Q9BZI1 471 aaPredicted RBP13.24□□□□□ -0.29
TRA2B-201ENST00000259043 NYAP1Q6ZVC0 841 aa13.23□□□□□ -0.29
TRA2B-201ENST00000259043 TSHZ2Q9NRE2 1034 aa13.23□□□□□ -0.29
TRA2B-201ENST00000259043 TRIM6-TRIM34B2RNG4 842 aa13.2□□□□□ -0.3
TRA2B-201ENST00000259043 SEPT9Q9UHD8 586 aaPredicted RBP13.18□□□□□ -0.3
TRA2B-201ENST00000259043 RBM33Q96EV2 1170 aaKnown RBP13.17□□□□□ -0.3
TRA2B-201ENST00000259043 FAM98CQ17RN3 349 aaKnown RBP13.16□□□□□ -0.3
TRA2B-201ENST00000259043 DDX12PQ92771 950 aa13.16□□□□□ -0.3
TRA2B-201ENST00000259043 WBP1LQ9NX94 342 aa13.16□□□□□ -0.3
TRA2B-201ENST00000259043 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.12□□□□□ -0.31
TRA2B-201ENST00000259043 KCNC4Q03721 635 aa13.11□□□□□ -0.31
TRA2B-201ENST00000259043 EN1Q05925 392 aaPredicted RBP13.11□□□□□ -0.31
TRA2B-201ENST00000259043 TSR3Q9UJK0 312 aaKnown RBP13.11□□□□□ -0.31
TRA2B-201ENST00000259043 LRCH3Q96II8 777 aa13.1□□□□□ -0.31
TRA2B-201ENST00000259043 NBR1Q14596 966 aa13.09□□□□□ -0.31
TRA2B-201ENST00000259043 PDIA6Q15084 440 aa13.09□□□□□ -0.31
TRA2B-201ENST00000259043 MAP3K7O43318 606 aa13.08□□□□□ -0.32
TRA2B-201ENST00000259043 PACS2Q86VP3 889 aa13.08□□□□□ -0.32
TRA2B-201ENST00000259043 HPS5Q9UPZ3 1129 aa13.08□□□□□ -0.32
TRA2B-201ENST00000259043 SPDYE16A6NNV3 312 aaPredicted RBP13.07□□□□□ -0.32
TRA2B-201ENST00000259043 TSKSQ9UJT2 592 aa13.07□□□□□ -0.32
TRA2B-201ENST00000259043 TSR1Q2NL82 804 aaKnown RBP13.06□□□□□ -0.32
TRA2B-201ENST00000259043 E2F4Q16254 413 aa13.02□□□□□ -0.33
TRA2B-201ENST00000259043 WDR70Q9NW82 654 aa13.02□□□□□ -0.33
TRA2B-201ENST00000259043 CERKQ8TCT0 537 aa13□□□□□ -0.33
TRA2B-201ENST00000259043 HAP1P54257 671 aaPredicted RBP12.99□□□□□ -0.33
TRA2B-201ENST00000259043 PPP4CP60510 307 aa12.99□□□□□ -0.33
TRA2B-201ENST00000259043 CDCA7LQ96GN5 454 aa12.99□□□□□ -0.33
TRA2B-201ENST00000259043 PRSS12P56730 875 aa12.98□□□□□ -0.33
TRA2B-201ENST00000259043 ARIH1Q9Y4X5 557 aaPredicted RBP12.98□□□□□ -0.33
TRA2B-201ENST00000259043 SAMD7Q7Z3H4 446 aa12.95□□□□□ -0.34
TRA2B-201ENST00000259043 SMAPO00193 183 aa12.94□□□□□ -0.34
TRA2B-201ENST00000259043 Q6ZNB5 142 aa12.94□□□□□ -0.34
TRA2B-201ENST00000259043 PRIM1P49642 420 aaKnown RBP12.93□□□□□ -0.34
TRA2B-201ENST00000259043 FAM198AQ9UFP1 575 aa12.93□□□□□ -0.34
TRA2B-201ENST00000259043 GRXCR2A6NFK2 248 aa12.92□□□□□ -0.34
TRA2B-201ENST00000259043 NBPF26B4DH59 902 aa12.92□□□□□ -0.34
TRA2B-201ENST00000259043 TATDN2Q93075 761 aa12.92□□□□□ -0.34
TRA2B-201ENST00000259043 KDM2AQ9Y2K7 1162 aa12.92□□□□□ -0.34
TRA2B-201ENST00000259043 TJAP1Q5JTD0 557 aa12.91□□□□□ -0.34
TRA2B-201ENST00000259043 PNMA3Q9UL41 463 aa12.9□□□□□ -0.34
TRA2B-201ENST00000259043 LAPTM4AQ15012 233 aa12.89□□□□□ -0.35
TRA2B-201ENST00000259043 KCNV2Q8TDN2 545 aa12.89□□□□□ -0.35
TRA2B-201ENST00000259043 C3orf80F5H4A9 247 aa12.87□□□□□ -0.35
TRA2B-201ENST00000259043 OSBPP22059 807 aa12.86□□□□□ -0.35
TRA2B-201ENST00000259043 IL21Q9HBE4 155 aa12.86□□□□□ -0.35
TRA2B-201ENST00000259043 RBM27Q9P2N5 1060 aaKnown RBP12.86□□□□□ -0.35
TRA2B-201ENST00000259043 HDGFP51858 240 aaKnown RBP12.85□□□□□ -0.35
TRA2B-201ENST00000259043 MTRQ99707 1265 aa12.85□□□□□ -0.35
TRA2B-201ENST00000259043 NUDT18Q6ZVK8 323 aa12.84□□□□□ -0.35
TRA2B-201ENST00000259043 CDHR5Q9HBB8 845 aa12.84□□□□□ -0.35
TRA2B-201ENST00000259043 VSIG10Q8N0Z9 540 aa12.83□□□□□ -0.36
TRA2B-201ENST00000259043 ARHGEF1Q92888 912 aaKnown RBP12.83□□□□□ -0.36
TRA2B-201ENST00000259043 GFRA3O60609 400 aa12.81□□□□□ -0.36
TRA2B-201ENST00000259043 RNF40O75150 1001 aa12.8□□□□□ -0.36
TRA2B-201ENST00000259043 PPP1R18Q6NYC8 613 aa12.8□□□□□ -0.36
TRA2B-201ENST00000259043 PRKD2Q9BZL6 878 aa12.8□□□□□ -0.36
TRA2B-201ENST00000259043 NECTIN2Q92692 538 aa12.79□□□□□ -0.36
TRA2B-201ENST00000259043 APLP1P51693 650 aa12.78□□□□□ -0.36
TRA2B-201ENST00000259043 P3H3Q8IVL6 736 aa12.78□□□□□ -0.36
TRA2B-201ENST00000259043 TTC13Q8NBP0 860 aa12.77□□□□□ -0.37
TRA2B-201ENST00000259043 V9GY48 417 aaPredicted RBP12.77□□□□□ -0.37
TRA2B-201ENST00000259043 ZNF516Q92618 1163 aa12.76□□□□□ -0.37
TRA2B-201ENST00000259043 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.75□□□□□ -0.37
TRA2B-201ENST00000259043 TRAF7Q6Q0C0 670 aa12.74□□□□□ -0.37
TRA2B-201ENST00000259043 PADI6Q6TGC4 694 aa12.74□□□□□ -0.37
TRA2B-201ENST00000259043 NPDC1Q9NQX5 325 aaPredicted RBP12.74□□□□□ -0.37
TRA2B-201ENST00000259043 SLF2Q8IX21 1173 aa12.73□□□□□ -0.37
TRA2B-201ENST00000259043 LCE2BO14633 110 aa12.72□□□□□ -0.37
TRA2B-201ENST00000259043 SWT1Q5T5J6 900 aaKnown RBP12.72□□□□□ -0.37
TRA2B-201ENST00000259043 NRG2O14511 850 aaPredicted RBP12.71□□□□□ -0.37
TRA2B-201ENST00000259043 SLC4A3P48751 1232 aa12.7□□□□□ -0.38
TRA2B-201ENST00000259043 GGCXP38435 758 aa12.68□□□□□ -0.38
TRA2B-201ENST00000259043 NKX2-3Q8TAU0 364 aa12.68□□□□□ -0.38
TRA2B-201ENST00000259043 MLLT3P42568 568 aaPredicted RBP12.67□□□□□ -0.38
TRA2B-201ENST00000259043 EYA1Q99502 592 aa12.67□□□□□ -0.38
TRA2B-201ENST00000259043 COPS2P61201 443 aa12.66□□□□□ -0.38
TRA2B-201ENST00000259043 SEMA3EO15041 775 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms