RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 ADCY10Q96PN6 1610 aa20.07■□□□□ 0.8
TRAFD1-201ENST00000257604 ADGRL2O95490 1459 aa20.07■□□□□ 0.8
TRAFD1-201ENST00000257604 SCAPERQ9BY12 1400 aa20.06■□□□□ 0.8
TRAFD1-201ENST00000257604 ARHGEF12Q9NZN5 1544 aa20.05■□□□□ 0.8
TRAFD1-201ENST00000257604 RBM19Q9Y4C8 960 aaKnown RBP20.05■□□□□ 0.8
TRAFD1-201ENST00000257604 CDC42BPBQ9Y5S2 1711 aa20.05■□□□□ 0.8
TRAFD1-201ENST00000257604 PLCH2O75038 1416 aa20.02■□□□□ 0.8
TRAFD1-201ENST00000257604 ADGBQ8N7X0 1667 aa20.02■□□□□ 0.79
TRAFD1-201ENST00000257604 NUTM2DQ5VT03 806 aaPredicted RBP20.01■□□□□ 0.79
TRAFD1-201ENST00000257604 RAPGEF3O95398 923 aa20■□□□□ 0.79
TRAFD1-201ENST00000257604 CNTLNQ9NXG0 1405 aa19.99■□□□□ 0.79
TRAFD1-201ENST00000257604 ZCCHC11Q5TAX3 1644 aaKnown RBP19.99■□□□□ 0.79
TRAFD1-201ENST00000257604 FAM135AQ9P2D6 1515 aa19.98■□□□□ 0.79
TRAFD1-201ENST00000257604 CC2D1BQ5T0F9 858 aaKnown RBP19.97■□□□□ 0.79
TRAFD1-201ENST00000257604 PREX2Q70Z35 1606 aa19.97■□□□□ 0.79
TRAFD1-201ENST00000257604 SHROOM2Q13796 1616 aa19.96■□□□□ 0.79
TRAFD1-201ENST00000257604 SHANK2Q9UPX8 1470 aa19.96■□□□□ 0.79
TRAFD1-201ENST00000257604 CROCC2H7BZ55 1655 aa19.96■□□□□ 0.79
TRAFD1-201ENST00000257604 TMC1Q8TDI8 760 aa19.96■□□□□ 0.79
TRAFD1-201ENST00000257604 ASXL2Q76L83 1435 aa19.95■□□□□ 0.78
TRAFD1-201ENST00000257604 CLASP1Q7Z460 1538 aa19.94■□□□□ 0.78
TRAFD1-201ENST00000257604 FANCAO15360 1455 aa19.94■□□□□ 0.78
TRAFD1-201ENST00000257604 MYO5CQ9NQX4 1742 aa19.9■□□□□ 0.78
TRAFD1-201ENST00000257604 WDR7Q9Y4E6 1490 aa19.9■□□□□ 0.78
TRAFD1-201ENST00000257604 SPATA31E1Q6ZUB1 1445 aa19.89■□□□□ 0.77
TRAFD1-201ENST00000257604 ADGRL1O94910 1474 aa19.89■□□□□ 0.77
TRAFD1-201ENST00000257604 ARHGEF5Q12774 1597 aa19.89■□□□□ 0.77
TRAFD1-201ENST00000257604 MSH5O43196 834 aa19.87■□□□□ 0.77
TRAFD1-201ENST00000257604 PLA2R1Q13018 1463 aa19.86■□□□□ 0.77
TRAFD1-201ENST00000257604 MLECQ14165 292 aa19.85■□□□□ 0.77
TRAFD1-201ENST00000257604 KANK1Q14678 1352 aa19.84■□□□□ 0.77
TRAFD1-201ENST00000257604 CFAP70Q5T0N1 1121 aa19.83■□□□□ 0.76
TRAFD1-201ENST00000257604 PLPPR3Q6T4P5 718 aa19.83■□□□□ 0.76
TRAFD1-201ENST00000257604 PANK3Q9H999 370 aa19.82■□□□□ 0.76
TRAFD1-201ENST00000257604 WASHC2CQ9Y4E1 1318 aa19.82■□□□□ 0.76
TRAFD1-201ENST00000257604 CD109Q6YHK3 1445 aa19.82■□□□□ 0.76
TRAFD1-201ENST00000257604 ERICH6Q7L0X2 663 aa19.82■□□□□ 0.76
TRAFD1-201ENST00000257604 SAFB2Q14151 953 aaKnown RBP eCLIP19.81■□□□□ 0.76
TRAFD1-201ENST00000257604 UHRF1BP1LA0JNW5 1464 aa19.8■□□□□ 0.76
TRAFD1-201ENST00000257604 DUOX2Q9NRD8 1548 aa19.8■□□□□ 0.76
TRAFD1-201ENST00000257604 CFAP65Q6ZU64 1925 aaKnown RBP19.79■□□□□ 0.76
TRAFD1-201ENST00000257604 FAM69CQ0P6D2 419 aa19.79■□□□□ 0.76
TRAFD1-201ENST00000257604 A2MP01023 1474 aa19.78■□□□□ 0.76
TRAFD1-201ENST00000257604 ABCC1P33527 1531 aa19.78■□□□□ 0.76
TRAFD1-201ENST00000257604 TMF1P82094 1093 aa19.77■□□□□ 0.76
TRAFD1-201ENST00000257604 BCORL1Q5H9F3 1711 aa19.77■□□□□ 0.76
TRAFD1-201ENST00000257604 PRAG1Q86YV5 1406 aa19.77■□□□□ 0.76
TRAFD1-201ENST00000257604 TMEM132EQ6IEE7 984 aa19.77■□□□□ 0.75
TRAFD1-201ENST00000257604 DISP3Q9P2K9 1392 aa19.75■□□□□ 0.75
TRAFD1-201ENST00000257604 RALGAPBQ86X10 1494 aa19.75■□□□□ 0.75
TRAFD1-201ENST00000257604 TRAK1Q9UPV9 953 aa19.75■□□□□ 0.75
TRAFD1-201ENST00000257604 ADGRF5Q8IZF2 1346 aa19.74■□□□□ 0.75
TRAFD1-201ENST00000257604 ERBINQ96RT1 1412 aa19.74■□□□□ 0.75
TRAFD1-201ENST00000257604 DHX29Q7Z478 1369 aaKnown RBP19.74■□□□□ 0.75
TRAFD1-201ENST00000257604 TNNT2P45379 298 aaPredicted RBP19.73■□□□□ 0.75
TRAFD1-201ENST00000257604 UHRF1BP1Q6BDS2 1440 aa19.71■□□□□ 0.75
TRAFD1-201ENST00000257604 UGGT1Q9NYU2 1555 aa19.71■□□□□ 0.75
TRAFD1-201ENST00000257604 TESK2Q96S53 571 aa19.71■□□□□ 0.75
TRAFD1-201ENST00000257604 STK26Q9P289 416 aa19.71■□□□□ 0.75
TRAFD1-201ENST00000257604 B4GALNT3Q6L9W6 998 aa19.7■□□□□ 0.74
TRAFD1-201ENST00000257604 KDM5DQ9BY66 1539 aa19.69■□□□□ 0.74
TRAFD1-201ENST00000257604 KDM5CP41229 1560 aa19.69■□□□□ 0.74
TRAFD1-201ENST00000257604 KNSTRNQ9Y448 316 aa19.69■□□□□ 0.74
TRAFD1-201ENST00000257604 ATP7AQ04656 1500 aa19.68■□□□□ 0.74
TRAFD1-201ENST00000257604 STAG3Q9UJ98 1225 aa19.67■□□□□ 0.74
TRAFD1-201ENST00000257604 ZFYVE16Q7Z3T8 1539 aa19.66■□□□□ 0.74
TRAFD1-201ENST00000257604 PNISRQ8TF01 805 aaKnown RBP19.66■□□□□ 0.74
TRAFD1-201ENST00000257604 KTN1Q86UP2 1357 aaKnown RBP19.65■□□□□ 0.74
TRAFD1-201ENST00000257604 MAST1Q9Y2H9 1570 aa19.64■□□□□ 0.73
TRAFD1-201ENST00000257604 NBR1Q14596 966 aa19.64■□□□□ 0.73
TRAFD1-201ENST00000257604 MYBBP1AQ9BQG0 1328 aaKnown RBP19.63■□□□□ 0.73
TRAFD1-201ENST00000257604 ATP10AO60312 1499 aa19.63■□□□□ 0.73
TRAFD1-201ENST00000257604 PLXNC1O60486 1568 aa19.62■□□□□ 0.73
TRAFD1-201ENST00000257604 ZBED9Q6R2W3 1325 aa19.61■□□□□ 0.73
TRAFD1-201ENST00000257604 RTEL1-TNFRSF6BF6WH68 1400 aa19.61■□□□□ 0.73
TRAFD1-201ENST00000257604 FBXO31Q5XUX0 539 aaPredicted RBP19.61■□□□□ 0.73
TRAFD1-201ENST00000257604 UNC13BO14795 1591 aa19.6■□□□□ 0.73
TRAFD1-201ENST00000257604 RALBP1Q15311 655 aa19.6■□□□□ 0.73
TRAFD1-201ENST00000257604 ARID4BQ4LE39 1312 aaPredicted RBP19.6■□□□□ 0.73
TRAFD1-201ENST00000257604 IQGAP3Q86VI3 1631 aa19.59■□□□□ 0.73
TRAFD1-201ENST00000257604 NLRP13Q86W25 1043 aa19.58■□□□□ 0.73
TRAFD1-201ENST00000257604 ZNF518AQ6AHZ1 1483 aa19.58■□□□□ 0.72
TRAFD1-201ENST00000257604 PER1O15534 1290 aaPredicted RBP19.58■□□□□ 0.72
TRAFD1-201ENST00000257604 CDCA7LQ96GN5 454 aa19.56■□□□□ 0.72
TRAFD1-201ENST00000257604 CCDC146Q8IYE0 955 aa19.56■□□□□ 0.72
TRAFD1-201ENST00000257604 E9PCH4 1651 aa19.55■□□□□ 0.72
TRAFD1-201ENST00000257604 NOS1P29475 1434 aa19.55■□□□□ 0.72
TRAFD1-201ENST00000257604 IDI1Q13907 227 aa19.54■□□□□ 0.72
TRAFD1-201ENST00000257604 ABCA9Q8IUA7 1624 aa19.54■□□□□ 0.72
TRAFD1-201ENST00000257604 WDR43Q15061 677 aaKnown RBP eCLIP19.53■□□□□ 0.72
TRAFD1-201ENST00000257604 YEATS2Q9ULM3 1422 aa19.53■□□□□ 0.72
TRAFD1-201ENST00000257604 SLC12A5Q9H2X9 1139 aa19.52■□□□□ 0.72
TRAFD1-201ENST00000257604 NEUROD2Q15784 382 aa19.51■□□□□ 0.71
TRAFD1-201ENST00000257604 POGZQ7Z3K3 1410 aa19.51■□□□□ 0.71
TRAFD1-201ENST00000257604 ADAMTS8Q9UP79 889 aa19.5■□□□□ 0.71
TRAFD1-201ENST00000257604 ESF1Q9H501 851 aaKnown RBP19.5■□□□□ 0.71
TRAFD1-201ENST00000257604 TRPM1Q7Z4N2 1603 aa19.5■□□□□ 0.71
TRAFD1-201ENST00000257604 CDCA8Q53HL2 280 aa19.5■□□□□ 0.71
TRAFD1-201ENST00000257604 NUDCQ9Y266 331 aa19.5■□□□□ 0.71
TRAFD1-201ENST00000257604 FANCIQ9NVI1 1328 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms