RNA–Protein interactions for RNA: ENST00000256367.2

TTC9-201, Transcript of tetratricopeptide repeat domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC9, Length 5,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9-201ENST00000256367 ERICH3Q5RHP9 1530 aa27.81■■■□□ 2.04
TTC9-201ENST00000256367 PMFBP1Q8TBY8 1022 aa27.8■■■□□ 2.04
TTC9-201ENST00000256367 TCERG1O14776 1098 aaKnown RBP27.8■■■□□ 2.04
TTC9-201ENST00000256367 NCOA2Q15596 1464 aa27.8■■■□□ 2.04
TTC9-201ENST00000256367 FYCO1Q9BQS8 1478 aa27.79■■■□□ 2.04
TTC9-201ENST00000256367 CGNL1Q0VF96 1302 aa27.79■■■□□ 2.04
TTC9-201ENST00000256367 PRDM2Q13029 1718 aa27.78■■■□□ 2.04
TTC9-201ENST00000256367 CLUAP1Q96AJ1 413 aa27.78■■■□□ 2.04
TTC9-201ENST00000256367 NESP48681 1621 aa27.78■■■□□ 2.04
TTC9-201ENST00000256367 ZNF330Q9Y3S2 320 aaPredicted RBP27.77■■■□□ 2.04
TTC9-201ENST00000256367 LTV1Q96GA3 475 aaPredicted RBP27.76■■■□□ 2.03
TTC9-201ENST00000256367 RRP7AQ9Y3A4 280 aaKnown RBP27.75■■■□□ 2.03
TTC9-201ENST00000256367 MINK1Q8N4C8 1332 aaPredicted RBP27.75■■■□□ 2.03
TTC9-201ENST00000256367 ANKRD50Q9ULJ7 1429 aa27.75■■■□□ 2.03
TTC9-201ENST00000256367 ARAP1Q96P48 1450 aa27.74■■■□□ 2.03
TTC9-201ENST00000256367 FAM69CQ0P6D2 419 aa27.73■■■□□ 2.03
TTC9-201ENST00000256367 SPRYD3Q8NCJ5 442 aa27.73■■■□□ 2.03
TTC9-201ENST00000256367 KIAA1211Q6ZU35 1233 aa27.72■■■□□ 2.03
TTC9-201ENST00000256367 COG3Q96JB2 828 aa27.72■■■□□ 2.03
TTC9-201ENST00000256367 MRC2Q9UBG0 1479 aa27.69■■■□□ 2.02
TTC9-201ENST00000256367 PLCB2Q00722 1185 aa27.69■■■□□ 2.02
TTC9-201ENST00000256367 SLC4A10Q6U841 1118 aa27.68■■■□□ 2.02
TTC9-201ENST00000256367 HMGXB3Q12766 1538 aa27.68■■■□□ 2.02
TTC9-201ENST00000256367 GOLGA6L4A6NEF3 574 aa27.68■■■□□ 2.02
TTC9-201ENST00000256367 HMMRO75330 724 aa27.68■■■□□ 2.02
TTC9-201ENST00000256367 STAC3Q96MF2 364 aa27.67■■■□□ 2.02
TTC9-201ENST00000256367 HDAC5Q9UQL6 1122 aa27.67■■■□□ 2.02
TTC9-201ENST00000256367 CC2D2AQ9P2K1 1620 aa27.65■■■□□ 2.02
TTC9-201ENST00000256367 TOPBP1Q92547 1522 aa27.64■■■□□ 2.02
TTC9-201ENST00000256367 PRG4Q92954 1404 aaPredicted RBP27.64■■■□□ 2.02
TTC9-201ENST00000256367 IFT140Q96RY7 1462 aa27.63■■■□□ 2.01
TTC9-201ENST00000256367 PRXQ9BXM0 1461 aa27.63■■■□□ 2.01
TTC9-201ENST00000256367 SYNJ2O15056 1496 aa27.63■■■□□ 2.01
TTC9-201ENST00000256367 CCDC9Q9Y3X0 531 aaKnown RBP27.63■■■□□ 2.01
TTC9-201ENST00000256367 TOP2BQ02880 1626 aa27.62■■■□□ 2.01
TTC9-201ENST00000256367 DNTTIP2Q5QJE6 756 aaKnown RBP27.62■■■□□ 2.01
TTC9-201ENST00000256367 ZBED9Q6R2W3 1325 aa27.61■■■□□ 2.01
TTC9-201ENST00000256367 E9PSI1 815 aa27.61■■■□□ 2.01
TTC9-201ENST00000256367 AFAP1Q8N556 730 aa27.6■■■□□ 2.01
TTC9-201ENST00000256367 POLA1P09884 1462 aaPredicted RBP27.6■■■□□ 2.01
TTC9-201ENST00000256367 ARHGAP5Q13017 1502 aa27.6■■■□□ 2.01
TTC9-201ENST00000256367 EFCAB5A4FU69 1503 aa27.58■■■□□ 2.01
TTC9-201ENST00000256367 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.58■■■□□ 2.01
TTC9-201ENST00000256367 KIF7Q2M1P5 1343 aa27.57■■■□□ 2
TTC9-201ENST00000256367 CCDC7Q96M83 1385 aa27.57■■■□□ 2
TTC9-201ENST00000256367 CHMP3Q9Y3E7 222 aa27.57■■■□□ 2
TTC9-201ENST00000256367 APAF1O14727 1248 aa27.57■■■□□ 2
TTC9-201ENST00000256367 RRBP1Q9P2E9 1410 aaKnown RBP27.57■■■□□ 2
TTC9-201ENST00000256367 MFAP1P55081 439 aaKnown RBP27.56■■■□□ 2
TTC9-201ENST00000256367 ELL2O00472 640 aaPredicted RBP27.56■■■□□ 2
TTC9-201ENST00000256367 BCL2L13Q9BXK5 485 aa27.55■■■□□ 2
TTC9-201ENST00000256367 GPATCH3Q96I76 525 aa27.54■■■□□ 2
TTC9-201ENST00000256367 GORABQ5T7V8 394 aa27.53■■■□□ 2
TTC9-201ENST00000256367 TRIM6-TRIM34B2RNG4 842 aa27.53■■■□□ 2
TTC9-201ENST00000256367 TULP1O00294 542 aaPredicted RBP27.53■■■□□ 2
TTC9-201ENST00000256367 DIAPH1O60610 1272 aaKnown RBP27.52■■■□□ 2
TTC9-201ENST00000256367 MIA2Q96PC5 1412 aa27.52■■■□□ 2
TTC9-201ENST00000256367 TAF7LQ5H9L4 462 aa27.51■■□□□ 1.99
TTC9-201ENST00000256367 PLIN1O60240 522 aa27.51■■□□□ 1.99
TTC9-201ENST00000256367 SLKQ9H2G2 1235 aaPredicted RBP27.51■■□□□ 1.99
TTC9-201ENST00000256367 GOLGA6L6A8MZA4 724 aa27.51■■□□□ 1.99
TTC9-201ENST00000256367 RRP1P56182 461 aaKnown RBP27.5■■□□□ 1.99
TTC9-201ENST00000256367 ZKSCAN2Q63HK3 967 aa27.5■■□□□ 1.99
TTC9-201ENST00000256367 TSHZ2Q9NRE2 1034 aa27.49■■□□□ 1.99
TTC9-201ENST00000256367 GBP4Q96PP9 640 aa27.48■■□□□ 1.99
TTC9-201ENST00000256367 C1orf141Q5JVX7 400 aa27.47■■□□□ 1.99
TTC9-201ENST00000256367 NGEFQ8N5V2 710 aa27.47■■□□□ 1.99
TTC9-201ENST00000256367 EHBP1L1Q8N3D4 1523 aa27.46■■□□□ 1.99
TTC9-201ENST00000256367 SNAPC4Q5SXM2 1469 aa27.45■■□□□ 1.99
TTC9-201ENST00000256367 CENPQQ7L2Z9 268 aaPredicted RBP27.45■■□□□ 1.98
TTC9-201ENST00000256367 GNL2Q13823 731 aaKnown RBP27.44■■□□□ 1.98
TTC9-201ENST00000256367 EXOC6Q8TAG9 804 aa27.44■■□□□ 1.98
TTC9-201ENST00000256367 L1TD1Q5T7N2 865 aaKnown RBP27.44■■□□□ 1.98
TTC9-201ENST00000256367 TEFQ10587 303 aa27.44■■□□□ 1.98
TTC9-201ENST00000256367 NRDCO43847 1150 aa27.43■■□□□ 1.98
TTC9-201ENST00000256367 TMEM132EQ6IEE7 984 aa27.43■■□□□ 1.98
TTC9-201ENST00000256367 CNTLNQ9NXG0 1405 aa27.43■■□□□ 1.98
TTC9-201ENST00000256367 DNMBPQ6XZF7 1577 aa27.43■■□□□ 1.98
TTC9-201ENST00000256367 ISY1Q9ULR0 285 aaKnown RBP27.42■■□□□ 1.98
TTC9-201ENST00000256367 TROQ12816 1431 aaPredicted RBP27.42■■□□□ 1.98
TTC9-201ENST00000256367 CRBNQ96SW2 442 aa27.41■■□□□ 1.98
TTC9-201ENST00000256367 RIPK4P57078 832 aa27.41■■□□□ 1.98
TTC9-201ENST00000256367 IPO9Q96P70 1041 aaKnown RBP27.4■■□□□ 1.98
TTC9-201ENST00000256367 COG6Q9Y2V7 657 aa27.4■■□□□ 1.98
TTC9-201ENST00000256367 C9orf84Q5VXU9 1444 aa27.4■■□□□ 1.98
TTC9-201ENST00000256367 PSME1Q06323 249 aa27.4■■□□□ 1.98
TTC9-201ENST00000256367 RUNDC1Q96C34 613 aa27.39■■□□□ 1.97
TTC9-201ENST00000256367 PTMSP20962 102 aa27.38■■□□□ 1.97
TTC9-201ENST00000256367 CFAP70Q5T0N1 1121 aa27.38■■□□□ 1.97
TTC9-201ENST00000256367 WASHC2AQ641Q2 1341 aa27.38■■□□□ 1.97
TTC9-201ENST00000256367 RTN4Q9NQC3 1192 aaKnown RBP27.38■■□□□ 1.97
TTC9-201ENST00000256367 CABP2Q9NPB3 220 aa27.37■■□□□ 1.97
TTC9-201ENST00000256367 HFM1A2PYH4 1435 aa27.35■■□□□ 1.97
TTC9-201ENST00000256367 EVA1CP58658 441 aa27.35■■□□□ 1.97
TTC9-201ENST00000256367 GGNBP2Q9H3C7 697 aa27.35■■□□□ 1.97
TTC9-201ENST00000256367 PLEKHH2Q8IVE3 1493 aa27.35■■□□□ 1.97
TTC9-201ENST00000256367 ANKRD45Q5TZF3 282 aa27.34■■□□□ 1.97
TTC9-201ENST00000256367 NAP1L5Q96NT1 182 aaPredicted RBP27.34■■□□□ 1.97
TTC9-201ENST00000256367 TMX4Q9H1E5 349 aaPredicted RBP27.34■■□□□ 1.97
TTC9-201ENST00000256367 HECW1Q76N89 1606 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms