RNA–Protein interactions for RNA: ENST00000255266.9

PDE6A-201, Transcript of phosphodiesterase 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6A, Length 5,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-201ENST00000255266 SALL2Q9Y467 1007 aaPredicted RBP12.02□□□□□ -0.49
PDE6A-201ENST00000255266 RAPGEF3O95398 923 aa12.01□□□□□ -0.49
PDE6A-201ENST00000255266 PBRM1Q86U86 1689 aa12.01□□□□□ -0.49
PDE6A-201ENST00000255266 CC2D1BQ5T0F9 858 aaKnown RBP12.01□□□□□ -0.49
PDE6A-201ENST00000255266 EIF5BO60841 1220 aaKnown RBP12.01□□□□□ -0.49
PDE6A-201ENST00000255266 PHF23Q9BUL5 403 aaPredicted RBP12.01□□□□□ -0.49
PDE6A-201ENST00000255266 TRAK1Q9UPV9 953 aa12□□□□□ -0.49
PDE6A-201ENST00000255266 ARAP1Q96P48 1450 aa12□□□□□ -0.49
PDE6A-201ENST00000255266 LAS1LQ9Y4W2 734 aaKnown RBP12□□□□□ -0.49
PDE6A-201ENST00000255266 ASXL2Q76L83 1435 aa12□□□□□ -0.49
PDE6A-201ENST00000255266 FANCAO15360 1455 aa11.99□□□□□ -0.49
PDE6A-201ENST00000255266 UPF2Q9HAU5 1272 aaKnown RBP11.99□□□□□ -0.49
PDE6A-201ENST00000255266 WDR7Q9Y4E6 1490 aa11.99□□□□□ -0.49
PDE6A-201ENST00000255266 RAPGEF6Q8TEU7 1601 aa11.99□□□□□ -0.49
PDE6A-201ENST00000255266 HFM1A2PYH4 1435 aa11.99□□□□□ -0.49
PDE6A-201ENST00000255266 RPGRIP1LQ68CZ1 1315 aa11.99□□□□□ -0.49
PDE6A-201ENST00000255266 TIAM1Q13009 1591 aa11.99□□□□□ -0.49
PDE6A-201ENST00000255266 GPRASP1Q5JY77 1395 aa11.98□□□□□ -0.49
PDE6A-201ENST00000255266 HIRIP3Q9BW71 556 aaPredicted RBP11.98□□□□□ -0.49
PDE6A-201ENST00000255266 COG3Q96JB2 828 aa11.98□□□□□ -0.49
PDE6A-201ENST00000255266 CTTNBP2Q8WZ74 1663 aa11.98□□□□□ -0.49
PDE6A-201ENST00000255266 ZNF644Q9H582 1327 aaPredicted RBP11.98□□□□□ -0.49
PDE6A-201ENST00000255266 CDK13Q14004 1512 aaKnown RBP11.98□□□□□ -0.49
PDE6A-201ENST00000255266 DCAF8L1A6NGE4 600 aa11.97□□□□□ -0.49
PDE6A-201ENST00000255266 HMGB2P26583 209 aaKnown RBP11.97□□□□□ -0.49
PDE6A-201ENST00000255266 ARHGEF11O15085 1522 aa11.97□□□□□ -0.49
PDE6A-201ENST00000255266 THOC2Q8NI27 1593 aaKnown RBP11.97□□□□□ -0.49
PDE6A-201ENST00000255266 LMOD3Q0VAK6 560 aa11.96□□□□□ -0.49
PDE6A-201ENST00000255266 HSPA5P11021 654 aaKnown RBP11.96□□□□□ -0.5
PDE6A-201ENST00000255266 RALBP1Q15311 655 aa11.95□□□□□ -0.5
PDE6A-201ENST00000255266 UGGT2Q9NYU1 1516 aa11.95□□□□□ -0.5
PDE6A-201ENST00000255266 GOLGA2Q08379 1002 aa11.94□□□□□ -0.5
PDE6A-201ENST00000255266 FTSJ3Q8IY81 847 aaKnown RBP11.94□□□□□ -0.5
PDE6A-201ENST00000255266 PCF11O94913 1555 aaKnown RBP11.94□□□□□ -0.5
PDE6A-201ENST00000255266 DAPK1P53355 1430 aa11.93□□□□□ -0.5
PDE6A-201ENST00000255266 L3MBTL2Q969R5 705 aa11.93□□□□□ -0.5
PDE6A-201ENST00000255266 CGNL1Q0VF96 1302 aa11.93□□□□□ -0.5
PDE6A-201ENST00000255266 MINK1Q8N4C8 1332 aaPredicted RBP11.93□□□□□ -0.5
PDE6A-201ENST00000255266 NUP160Q12769 1436 aa11.93□□□□□ -0.5
PDE6A-201ENST00000255266 KIAA0556O60303 1618 aa11.92□□□□□ -0.5
PDE6A-201ENST00000255266 HDAC5Q9UQL6 1122 aa11.92□□□□□ -0.5
PDE6A-201ENST00000255266 NUTM2FA1L443 756 aa11.92□□□□□ -0.5
PDE6A-201ENST00000255266 CAMSAP2Q08AD1 1489 aa11.92□□□□□ -0.5
PDE6A-201ENST00000255266 C1orf141Q5JVX7 400 aa11.91□□□□□ -0.5
PDE6A-201ENST00000255266 ABCC2Q92887 1545 aa11.91□□□□□ -0.5
PDE6A-201ENST00000255266 SF3B2Q13435 895 aaKnown RBP11.91□□□□□ -0.5
PDE6A-201ENST00000255266 MAP3K1Q13233 1512 aa11.91□□□□□ -0.5
PDE6A-201ENST00000255266 CENPJQ9HC77 1338 aaPredicted RBP11.91□□□□□ -0.5
PDE6A-201ENST00000255266 ITSN2Q9NZM3 1697 aa11.91□□□□□ -0.5
PDE6A-201ENST00000255266 NEUROD2Q15784 382 aa11.9□□□□□ -0.5
PDE6A-201ENST00000255266 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.9□□□□□ -0.5
PDE6A-201ENST00000255266 ROCK1Q13464 1354 aa11.9□□□□□ -0.51
PDE6A-201ENST00000255266 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.89□□□□□ -0.51
PDE6A-201ENST00000255266 ZNF518AQ6AHZ1 1483 aa11.89□□□□□ -0.51
PDE6A-201ENST00000255266 PLCH2O75038 1416 aa11.88□□□□□ -0.51
PDE6A-201ENST00000255266 CASC1Q6TDU7 716 aa11.88□□□□□ -0.51
PDE6A-201ENST00000255266 ANKRD30BQ9BXX2 1392 aa11.88□□□□□ -0.51
PDE6A-201ENST00000255266 U2AF1L5P0DN76 240 aaPredicted RBP11.88□□□□□ -0.51
PDE6A-201ENST00000255266 U2AF1Q01081 240 aaKnown RBP eCLIP11.88□□□□□ -0.51
PDE6A-201ENST00000255266 CFAP74Q9C0B2 1584 aa11.88□□□□□ -0.51
PDE6A-201ENST00000255266 OS9Q13438 667 aaPredicted RBP11.88□□□□□ -0.51
PDE6A-201ENST00000255266 ABCA5Q8WWZ7 1642 aa11.87□□□□□ -0.51
PDE6A-201ENST00000255266 WASHC2AQ641Q2 1341 aa11.87□□□□□ -0.51
PDE6A-201ENST00000255266 ESCO1Q5FWF5 840 aa11.86□□□□□ -0.51
PDE6A-201ENST00000255266 LTV1Q96GA3 475 aaPredicted RBP11.85□□□□□ -0.51
PDE6A-201ENST00000255266 CNTLNQ9NXG0 1405 aa11.85□□□□□ -0.51
PDE6A-201ENST00000255266 CEP170Q5SW79 1584 aa11.85□□□□□ -0.51
PDE6A-201ENST00000255266 HSP90AA1P07900 732 aaKnown RBP11.84□□□□□ -0.51
PDE6A-201ENST00000255266 STK31Q9BXU1 1019 aa11.84□□□□□ -0.51
PDE6A-201ENST00000255266 KIAA1107Q9UPP5 1409 aa11.84□□□□□ -0.51
PDE6A-201ENST00000255266 FAM135AQ9P2D6 1515 aa11.84□□□□□ -0.51
PDE6A-201ENST00000255266 SMG6Q86US8 1419 aaKnown RBP11.84□□□□□ -0.51
PDE6A-201ENST00000255266 ERBINQ96RT1 1412 aa11.84□□□□□ -0.51
PDE6A-201ENST00000255266 RTL5Q5HYW3 569 aaPredicted RBP11.84□□□□□ -0.51
PDE6A-201ENST00000255266 PTPN23Q9H3S7 1636 aa11.84□□□□□ -0.51
PDE6A-201ENST00000255266 LRPPRCP42704 1394 aaKnown RBP11.84□□□□□ -0.51
PDE6A-201ENST00000255266 IPO8O15397 1037 aaKnown RBP11.83□□□□□ -0.51
PDE6A-201ENST00000255266 DHX29Q7Z478 1369 aaKnown RBP11.83□□□□□ -0.52
PDE6A-201ENST00000255266 TNRQ92752 1358 aa11.83□□□□□ -0.52
PDE6A-201ENST00000255266 ATP10BO94823 1461 aa11.83□□□□□ -0.52
PDE6A-201ENST00000255266 PIP4K2BP78356 416 aa11.83□□□□□ -0.52
PDE6A-201ENST00000255266 ABCC10Q5T3U5 1492 aa11.83□□□□□ -0.52
PDE6A-201ENST00000255266 G3V3G9 751 aa11.82□□□□□ -0.52
PDE6A-201ENST00000255266 DCAF8Q5TAQ9 597 aa11.82□□□□□ -0.52
PDE6A-201ENST00000255266 ZNF330Q9Y3S2 320 aaPredicted RBP11.82□□□□□ -0.52
PDE6A-201ENST00000255266 TTC5Q8N0Z6 440 aa11.82□□□□□ -0.52
PDE6A-201ENST00000255266 RAPGEF4Q8WZA2 1011 aa11.81□□□□□ -0.52
PDE6A-201ENST00000255266 CCDC136Q96JN2 1154 aa11.81□□□□□ -0.52
PDE6A-201ENST00000255266 MSH5O43196 834 aa11.81□□□□□ -0.52
PDE6A-201ENST00000255266 ZNF692Q9BU19 519 aaPredicted RBP11.81□□□□□ -0.52
PDE6A-201ENST00000255266 USP47Q96K76 1375 aa11.8□□□□□ -0.52
PDE6A-201ENST00000255266 GTF2E1P29083 439 aaPredicted RBP11.8□□□□□ -0.52
PDE6A-201ENST00000255266 TOM1O60784 492 aa11.79□□□□□ -0.52
PDE6A-201ENST00000255266 ANP32AP39687 249 aaKnown RBP11.79□□□□□ -0.52
PDE6A-201ENST00000255266 TARBP1Q13395 1621 aaKnown RBP11.79□□□□□ -0.52
PDE6A-201ENST00000255266 DUOX2Q9NRD8 1548 aa11.78□□□□□ -0.52
PDE6A-201ENST00000255266 NLRP13Q86W25 1043 aa11.78□□□□□ -0.52
PDE6A-201ENST00000255266 A2MP01023 1474 aa11.78□□□□□ -0.52
PDE6A-201ENST00000255266 TEFQ10587 303 aa11.78□□□□□ -0.52
PDE6A-201ENST00000255266 ST20-MTHFSA0A0A6YYL1 179 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms