RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 AEBP2Q6ZN18 517 aaPredicted RBP16.33■□□□□ 0.2
PCDHGA3-201ENST00000253812 GNL2Q13823 731 aaKnown RBP16.32■□□□□ 0.2
PCDHGA3-201ENST00000253812 MRE11P49959 708 aa16.32■□□□□ 0.2
PCDHGA3-201ENST00000253812 ANKRD30AQ9BXX3 1397 aa16.32■□□□□ 0.2
PCDHGA3-201ENST00000253812 ST18O60284 1047 aa16.31■□□□□ 0.2
PCDHGA3-201ENST00000253812 DIAPH3Q9NSV4 1193 aa16.31■□□□□ 0.2
PCDHGA3-201ENST00000253812 NFKBIBQ15653 356 aa16.3■□□□□ 0.2
PCDHGA3-201ENST00000253812 R3HCC1Q9Y3T6 440 aaKnown RBP16.3■□□□□ 0.2
PCDHGA3-201ENST00000253812 CENPQQ7L2Z9 268 aaPredicted RBP16.3■□□□□ 0.2
PCDHGA3-201ENST00000253812 CWC15Q9P013 229 aaKnown RBP16.29■□□□□ 0.2
PCDHGA3-201ENST00000253812 FOXD4L1Q9NU39 408 aa16.29■□□□□ 0.2
PCDHGA3-201ENST00000253812 GAPVD1Q14C86 1478 aa16.29■□□□□ 0.2
PCDHGA3-201ENST00000253812 TMF1P82094 1093 aa16.29■□□□□ 0.2
PCDHGA3-201ENST00000253812 CHMP5Q9NZZ3 219 aa16.29■□□□□ 0.2
PCDHGA3-201ENST00000253812 BRPF3Q9ULD4 1205 aa16.29■□□□□ 0.2
PCDHGA3-201ENST00000253812 KIF16BQ96L93 1317 aa16.28■□□□□ 0.2
PCDHGA3-201ENST00000253812 CCAR2Q8N163 923 aaKnown RBP16.28■□□□□ 0.2
PCDHGA3-201ENST00000253812 ARGLU1Q9NWB6 273 aaPredicted RBP16.27■□□□□ 0.2
PCDHGA3-201ENST00000253812 CCDC18Q5T9S5 1454 aa16.27■□□□□ 0.2
PCDHGA3-201ENST00000253812 U2SURPO15042 1029 aaKnown RBP16.27■□□□□ 0.2
PCDHGA3-201ENST00000253812 ZNF592Q92610 1267 aa16.27■□□□□ 0.2
PCDHGA3-201ENST00000253812 GOLGA6L19H0YKK7 550 aa16.27■□□□□ 0.19
PCDHGA3-201ENST00000253812 KIF3BO15066 747 aa16.26■□□□□ 0.19
PCDHGA3-201ENST00000253812 SAFB2Q14151 953 aaKnown RBP eCLIP16.26■□□□□ 0.19
PCDHGA3-201ENST00000253812 RALBP1Q15311 655 aa16.26■□□□□ 0.19
PCDHGA3-201ENST00000253812 ATP6V1DQ9Y5K8 247 aa16.25■□□□□ 0.19
PCDHGA3-201ENST00000253812 KTN1Q86UP2 1357 aaKnown RBP16.25■□□□□ 0.19
PCDHGA3-201ENST00000253812 L3MBTL2Q969R5 705 aa16.25■□□□□ 0.19
PCDHGA3-201ENST00000253812 CCDC70Q6NSX1 233 aa16.24■□□□□ 0.19
PCDHGA3-201ENST00000253812 BECN2A8MW95 431 aa16.24■□□□□ 0.19
PCDHGA3-201ENST00000253812 HMGN5P82970 282 aaKnown RBP16.24■□□□□ 0.19
PCDHGA3-201ENST00000253812 ITPRIPQ8IWB1 547 aa16.24■□□□□ 0.19
PCDHGA3-201ENST00000253812 UBE2Q2Q8WVN8 375 aa16.24■□□□□ 0.19
PCDHGA3-201ENST00000253812 PTPRGP23470 1445 aa16.23■□□□□ 0.19
PCDHGA3-201ENST00000253812 AQRO60306 1485 aaKnown RBP eCLIP16.22■□□□□ 0.19
PCDHGA3-201ENST00000253812 SPAG9O60271 1321 aaKnown RBP16.22■□□□□ 0.19
PCDHGA3-201ENST00000253812 APBB1O00213 710 aa16.21■□□□□ 0.19
PCDHGA3-201ENST00000253812 ACBD3Q9H3P7 528 aa16.21■□□□□ 0.19
PCDHGA3-201ENST00000253812 RSPH4AQ5TD94 716 aa16.21■□□□□ 0.18
PCDHGA3-201ENST00000253812 GOLGA2Q08379 1002 aa16.2■□□□□ 0.18
PCDHGA3-201ENST00000253812 STK26Q9P289 416 aa16.2■□□□□ 0.18
PCDHGA3-201ENST00000253812 HSP90B2PQ58FF3 399 aa16.2■□□□□ 0.18
PCDHGA3-201ENST00000253812 CFTRP13569 1480 aa16.2■□□□□ 0.18
PCDHGA3-201ENST00000253812 SRPK2P78362 688 aaKnown RBP16.19■□□□□ 0.18
PCDHGA3-201ENST00000253812 TAF3Q5VWG9 929 aa16.19■□□□□ 0.18
PCDHGA3-201ENST00000253812 CCDC39Q9UFE4 941 aa16.19■□□□□ 0.18
PCDHGA3-201ENST00000253812 LMOD2Q6P5Q4 547 aa16.19■□□□□ 0.18
PCDHGA3-201ENST00000253812 KIF3AQ9Y496 699 aa16.19■□□□□ 0.18
PCDHGA3-201ENST00000253812 NESP48681 1621 aa16.18■□□□□ 0.18
PCDHGA3-201ENST00000253812 PATL2C9JE40 543 aaKnown RBP16.18■□□□□ 0.18
PCDHGA3-201ENST00000253812 RDXP35241 583 aaKnown RBP16.18■□□□□ 0.18
PCDHGA3-201ENST00000253812 NASPP49321 788 aaPredicted RBP16.18■□□□□ 0.18
PCDHGA3-201ENST00000253812 DHX57Q6P158 1386 aaKnown RBP16.17■□□□□ 0.18
PCDHGA3-201ENST00000253812 HOMER1Q86YM7 354 aa16.17■□□□□ 0.18
PCDHGA3-201ENST00000253812 FOXD4L5Q5VV16 416 aaPredicted RBP16.16■□□□□ 0.18
PCDHGA3-201ENST00000253812 FOXD4L4Q8WXT5 416 aaPredicted RBP16.16■□□□□ 0.18
PCDHGA3-201ENST00000253812 ROCK2O75116 1388 aaKnown RBP16.16■□□□□ 0.18
PCDHGA3-201ENST00000253812 H0YHG0 523 aa16.16■□□□□ 0.18
PCDHGA3-201ENST00000253812 HSP90B1P14625 803 aaKnown RBP16.16■□□□□ 0.18
PCDHGA3-201ENST00000253812 MNS1Q8NEH6 495 aa16.16■□□□□ 0.18
PCDHGA3-201ENST00000253812 RRP12Q5JTH9 1297 aaKnown RBP16.15■□□□□ 0.18
PCDHGA3-201ENST00000253812 RBM10P98175 930 aaKnown RBP16.15■□□□□ 0.18
PCDHGA3-201ENST00000253812 TSR1Q2NL82 804 aaKnown RBP16.15■□□□□ 0.18
PCDHGA3-201ENST00000253812 HDGFP51858 240 aaKnown RBP16.14■□□□□ 0.17
PCDHGA3-201ENST00000253812 SF3A1Q15459 793 aaKnown RBP16.14■□□□□ 0.17
PCDHGA3-201ENST00000253812 TPM1P09493 284 aa16.14■□□□□ 0.17
PCDHGA3-201ENST00000253812 ZBED9Q6R2W3 1325 aa16.14■□□□□ 0.17
PCDHGA3-201ENST00000253812 SYNJ1O43426 1573 aa16.14■□□□□ 0.17
PCDHGA3-201ENST00000253812 EXOC6Q8TAG9 804 aa16.14■□□□□ 0.17
PCDHGA3-201ENST00000253812 HMMRO75330 724 aa16.13■□□□□ 0.17
PCDHGA3-201ENST00000253812 RRP1P56182 461 aaKnown RBP16.13■□□□□ 0.17
PCDHGA3-201ENST00000253812 NOL8Q76FK4 1167 aaKnown RBP16.13■□□□□ 0.17
PCDHGA3-201ENST00000253812 IFT57Q9NWB7 429 aa16.13■□□□□ 0.17
PCDHGA3-201ENST00000253812 CCDC191Q8NCU4 936 aa16.13■□□□□ 0.17
PCDHGA3-201ENST00000253812 ISY1Q9ULR0 285 aaKnown RBP16.13■□□□□ 0.17
PCDHGA3-201ENST00000253812 CENPJQ9HC77 1338 aaPredicted RBP16.13■□□□□ 0.17
PCDHGA3-201ENST00000253812 MORC1Q86VD1 984 aa16.13■□□□□ 0.17
PCDHGA3-201ENST00000253812 NLRP13Q86W25 1043 aa16.13■□□□□ 0.17
PCDHGA3-201ENST00000253812 NUCB2P80303 420 aa16.12■□□□□ 0.17
PCDHGA3-201ENST00000253812 CYB5RLQ6IPT4 315 aa16.12■□□□□ 0.17
PCDHGA3-201ENST00000253812 CDR1P51861 262 aa16.11■□□□□ 0.17
PCDHGA3-201ENST00000253812 SOX12O15370 315 aa16.11■□□□□ 0.17
PCDHGA3-201ENST00000253812 AK7Q96M32 723 aa16.11■□□□□ 0.17
PCDHGA3-201ENST00000253812 PHLDB1Q86UU1 1377 aa16.11■□□□□ 0.17
PCDHGA3-201ENST00000253812 WASHC2CQ9Y4E1 1318 aa16.11■□□□□ 0.17
PCDHGA3-201ENST00000253812 KIF21BO75037 1637 aa16.11■□□□□ 0.17
PCDHGA3-201ENST00000253812 OSCARQ8IYS5 282 aa16.11■□□□□ 0.17
PCDHGA3-201ENST00000253812 TRIM6-TRIM34B2RNG4 842 aa16.1■□□□□ 0.17
PCDHGA3-201ENST00000253812 SMC4Q9NTJ3 1288 aa16.1■□□□□ 0.17
PCDHGA3-201ENST00000253812 ZNF644Q9H582 1327 aaPredicted RBP16.1■□□□□ 0.17
PCDHGA3-201ENST00000253812 CCDC173Q0VFZ6 552 aa16.1■□□□□ 0.17
PCDHGA3-201ENST00000253812 CLUAP1Q96AJ1 413 aa16.1■□□□□ 0.17
PCDHGA3-201ENST00000253812 CEP89Q96ST8 783 aa16.1■□□□□ 0.17
PCDHGA3-201ENST00000253812 NUTM2DQ5VT03 806 aaPredicted RBP16.09■□□□□ 0.17
PCDHGA3-201ENST00000253812 CLSTN1O94985 981 aa16.09■□□□□ 0.17
PCDHGA3-201ENST00000253812 TRAK2O60296 914 aa16.09■□□□□ 0.17
PCDHGA3-201ENST00000253812 RUFY1Q96T51 708 aa16.09■□□□□ 0.17
PCDHGA3-201ENST00000253812 CGNL1Q0VF96 1302 aa16.08■□□□□ 0.17
PCDHGA3-201ENST00000253812 CC2D2AQ9P2K1 1620 aa16.08■□□□□ 0.17
PCDHGA3-201ENST00000253812 LEKR1Q6ZMV7 388 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms