RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 CASC1Q6TDU7 716 aa19.33■□□□□ 0.69
UBE4B-201ENST00000253251 FRAT1Q92837 279 aaPredicted RBP19.33■□□□□ 0.69
UBE4B-201ENST00000253251 ANP32BQ92688 251 aaKnown RBP19.32■□□□□ 0.68
UBE4B-201ENST00000253251 ROCK1Q13464 1354 aa19.32■□□□□ 0.68
UBE4B-201ENST00000253251 IPO8O15397 1037 aaKnown RBP19.31■□□□□ 0.68
UBE4B-201ENST00000253251 AFAP1Q8N556 730 aa19.29■□□□□ 0.68
UBE4B-201ENST00000253251 DAPK1P53355 1430 aa19.29■□□□□ 0.68
UBE4B-201ENST00000253251 PCF11O94913 1555 aaKnown RBP19.28■□□□□ 0.68
UBE4B-201ENST00000253251 KIAA1107Q9UPP5 1409 aa19.28■□□□□ 0.68
UBE4B-201ENST00000253251 LMOD3Q0VAK6 560 aa19.27■□□□□ 0.68
UBE4B-201ENST00000253251 NGDNQ8NEJ9 315 aaKnown RBP19.27■□□□□ 0.68
UBE4B-201ENST00000253251 CGNL1Q0VF96 1302 aa19.27■□□□□ 0.68
UBE4B-201ENST00000253251 SENP3-EIF4A1A0A087X0R7 540 aa19.27■□□□□ 0.68
UBE4B-201ENST00000253251 PANK3Q9H999 370 aa19.27■□□□□ 0.68
UBE4B-201ENST00000253251 NUTM2DQ5VT03 806 aaPredicted RBP19.26■□□□□ 0.67
UBE4B-201ENST00000253251 PAK3O75914 559 aaPredicted RBP19.25■□□□□ 0.67
UBE4B-201ENST00000253251 NGEFQ8N5V2 710 aa19.25■□□□□ 0.67
UBE4B-201ENST00000253251 SOX12O15370 315 aa19.25■□□□□ 0.67
UBE4B-201ENST00000253251 PRKRIP1Q9H875 184 aaPredicted RBP19.24■□□□□ 0.67
UBE4B-201ENST00000253251 RCAN3Q9UKA8 241 aa19.24■□□□□ 0.67
UBE4B-201ENST00000253251 CFAP44Q96MT7 982 aa19.24■□□□□ 0.67
UBE4B-201ENST00000253251 CDK13Q14004 1512 aaKnown RBP19.24■□□□□ 0.67
UBE4B-201ENST00000253251 GOLGA2Q08379 1002 aa19.23■□□□□ 0.67
UBE4B-201ENST00000253251 CENPJQ9HC77 1338 aaPredicted RBP19.22■□□□□ 0.67
UBE4B-201ENST00000253251 ZNF608Q9ULD9 1512 aaPredicted RBP19.21■□□□□ 0.67
UBE4B-201ENST00000253251 CCDC141Q6ZP82 1450 aa19.2■□□□□ 0.66
UBE4B-201ENST00000253251 CCDC7Q96M83 1385 aa19.19■□□□□ 0.66
UBE4B-201ENST00000253251 THOC2Q8NI27 1593 aaKnown RBP19.19■□□□□ 0.66
UBE4B-201ENST00000253251 KIF14Q15058 1648 aa19.18■□□□□ 0.66
UBE4B-201ENST00000253251 SCAPERQ9BY12 1400 aa19.18■□□□□ 0.66
UBE4B-201ENST00000253251 ANP32EQ9BTT0 268 aa19.18■□□□□ 0.66
UBE4B-201ENST00000253251 ARXQ96QS3 562 aa19.17■□□□□ 0.66
UBE4B-201ENST00000253251 PLB1Q6P1J6 1458 aa19.16■□□□□ 0.66
UBE4B-201ENST00000253251 SLC52A1Q9NWF4 448 aa19.16■□□□□ 0.66
UBE4B-201ENST00000253251 COG3Q96JB2 828 aa19.16■□□□□ 0.66
UBE4B-201ENST00000253251 NAIPQ13075 1403 aa19.15■□□□□ 0.66
UBE4B-201ENST00000253251 AMPHP49418 695 aa19.15■□□□□ 0.66
UBE4B-201ENST00000253251 CSB-PGBD3P0DP91 1061 aa19.15■□□□□ 0.66
UBE4B-201ENST00000253251 HDAC5Q9UQL6 1122 aa19.14■□□□□ 0.65
UBE4B-201ENST00000253251 RPGRIP1LQ68CZ1 1315 aa19.13■□□□□ 0.65
UBE4B-201ENST00000253251 OS9Q13438 667 aaPredicted RBP19.12■□□□□ 0.65
UBE4B-201ENST00000253251 CNTLNQ9NXG0 1405 aa19.12■□□□□ 0.65
UBE4B-201ENST00000253251 KIF7Q2M1P5 1343 aa19.12■□□□□ 0.65
UBE4B-201ENST00000253251 MINK1Q8N4C8 1332 aaPredicted RBP19.12■□□□□ 0.65
UBE4B-201ENST00000253251 CAMSAP2Q08AD1 1489 aa19.12■□□□□ 0.65
UBE4B-201ENST00000253251 RGS3P49796 1198 aa19.12■□□□□ 0.65
UBE4B-201ENST00000253251 B4GALNT3Q6L9W6 998 aa19.12■□□□□ 0.65
UBE4B-201ENST00000253251 PTPN23Q9H3S7 1636 aa19.12■□□□□ 0.65
UBE4B-201ENST00000253251 GOLGA6L22H0YM25 854 aa19.11■□□□□ 0.65
UBE4B-201ENST00000253251 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.11■□□□□ 0.654e-6■■■□□ 16.6
UBE4B-201ENST00000253251 ARHGEF11O15085 1522 aa19.11■□□□□ 0.65
UBE4B-201ENST00000253251 RWDD1Q9H446 243 aaPredicted RBP19.1■□□□□ 0.65
UBE4B-201ENST00000253251 WASHC2AQ641Q2 1341 aa19.1■□□□□ 0.65
UBE4B-201ENST00000253251 STK31Q9BXU1 1019 aa19.1■□□□□ 0.65
UBE4B-201ENST00000253251 ZBED9Q6R2W3 1325 aa19.09■□□□□ 0.65
UBE4B-201ENST00000253251 AKNAQ7Z591 1439 aa19.08■□□□□ 0.64
UBE4B-201ENST00000253251 ANKRD30BQ9BXX2 1392 aa19.08■□□□□ 0.64
UBE4B-201ENST00000253251 CD109Q6YHK3 1445 aa19.07■□□□□ 0.64
UBE4B-201ENST00000253251 POGZQ7Z3K3 1410 aa19.07■□□□□ 0.64
UBE4B-201ENST00000253251 PMFBP1Q8TBY8 1022 aa19.07■□□□□ 0.64
UBE4B-201ENST00000253251 ABCC5O15440 1437 aa19.07■□□□□ 0.64
UBE4B-201ENST00000253251 NCLP19338 710 aaKnown RBP19.06■□□□□ 0.64
UBE4B-201ENST00000253251 E9PSI1 815 aa19.05■□□□□ 0.64
UBE4B-201ENST00000253251 SMC4Q9NTJ3 1288 aa19.04■□□□□ 0.64
UBE4B-201ENST00000253251 CCDC146Q8IYE0 955 aa19.03■□□□□ 0.64
UBE4B-201ENST00000253251 UGGT2Q9NYU1 1516 aa19.02■□□□□ 0.63
UBE4B-201ENST00000253251 TCERG1O14776 1098 aaKnown RBP19.01■□□□□ 0.63
UBE4B-201ENST00000253251 ADAMTS12P58397 1594 aa19.01■□□□□ 0.63
UBE4B-201ENST00000253251 ADGRL1O94910 1474 aa19.01■□□□□ 0.63
UBE4B-201ENST00000253251 BRD4O60885 1362 aaPredicted RBP19.01■□□□□ 0.63
UBE4B-201ENST00000253251 DIAPH1O60610 1272 aaKnown RBP19■□□□□ 0.63
UBE4B-201ENST00000253251 ITPRIPQ8IWB1 547 aa19■□□□□ 0.63
UBE4B-201ENST00000253251 NPHP1O15259 732 aa19■□□□□ 0.63
UBE4B-201ENST00000253251 CFAP70Q5T0N1 1121 aa19■□□□□ 0.63
UBE4B-201ENST00000253251 NUTM2FA1L443 756 aa19■□□□□ 0.63
UBE4B-201ENST00000253251 THEMISQ8N1K5 641 aaPredicted RBP19■□□□□ 0.63
UBE4B-201ENST00000253251 RAPGEF6Q8TEU7 1601 aa18.99■□□□□ 0.63
UBE4B-201ENST00000253251 HMMRO75330 724 aa18.99■□□□□ 0.63
UBE4B-201ENST00000253251 NCOA1Q15788 1441 aa18.99■□□□□ 0.63
UBE4B-201ENST00000253251 MCCP23508 829 aa18.98■□□□□ 0.63
UBE4B-201ENST00000253251 RAPGEF3O95398 923 aa18.98■□□□□ 0.63
UBE4B-201ENST00000253251 CTTNBP2Q8WZ74 1663 aa18.97■□□□□ 0.63
UBE4B-201ENST00000253251 PPP6R1Q9UPN7 881 aa18.96■□□□□ 0.63
UBE4B-201ENST00000253251 NBR1Q14596 966 aa18.96■□□□□ 0.63
UBE4B-201ENST00000253251 WDR62O43379 1518 aa18.96■□□□□ 0.63
UBE4B-201ENST00000253251 WDR97A6NE52 1622 aa18.95■□□□□ 0.62
UBE4B-201ENST00000253251 TXNDC2Q86VQ3 553 aa18.94■□□□□ 0.62
UBE4B-201ENST00000253251 RUNDC1Q96C34 613 aa18.94■□□□□ 0.62
UBE4B-201ENST00000253251 ERBINQ96RT1 1412 aa18.94■□□□□ 0.62
UBE4B-201ENST00000253251 NBPF8Q3BBV2 869 aa18.93■□□□□ 0.62
UBE4B-201ENST00000253251 TMEM132EQ6IEE7 984 aa18.93■□□□□ 0.62
UBE4B-201ENST00000253251 KCNJ4P48050 445 aa18.92■□□□□ 0.62
UBE4B-201ENST00000253251 GPATCH8Q9UKJ3 1502 aaKnown RBP18.92■□□□□ 0.62
UBE4B-201ENST00000253251 PSME1Q06323 249 aa18.92■□□□□ 0.62
UBE4B-201ENST00000253251 LTV1Q96GA3 475 aaPredicted RBP18.91■□□□□ 0.62
UBE4B-201ENST00000253251 DENND4BO75064 1496 aaPredicted RBP18.91■□□□□ 0.62
UBE4B-201ENST00000253251 C1orf141Q5JVX7 400 aa18.9■□□□□ 0.62
UBE4B-201ENST00000253251 FANCAO15360 1455 aa18.9■□□□□ 0.62
UBE4B-201ENST00000253251 ATP10BO94823 1461 aa18.9■□□□□ 0.62
UBE4B-201ENST00000253251 APAF1O14727 1248 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms