RNA–Protein interactions for RNA: ENST00000249064.8

CCDC117-201, Transcript of coiled-coil domain containing 117, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC117, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-201ENST00000249064 CARMIL2Q6F5E8 1435 aa17.15■□□□□ 0.34
CCDC117-201ENST00000249064 ABCC5O15440 1437 aa17.14■□□□□ 0.34
CCDC117-201ENST00000249064 GOLGA6L3A6NEY3 463 aa17.14■□□□□ 0.34
CCDC117-201ENST00000249064 PANK3Q9H999 370 aa17.14■□□□□ 0.33
CCDC117-201ENST00000249064 ZNF608Q9ULD9 1512 aaPredicted RBP17.14■□□□□ 0.33
CCDC117-201ENST00000249064 RRP1P56182 461 aaKnown RBP17.14■□□□□ 0.33
CCDC117-201ENST00000249064 CUL7Q14999 1698 aa17.14■□□□□ 0.33
CCDC117-201ENST00000249064 THOC2Q8NI27 1593 aaKnown RBP17.13■□□□□ 0.33
CCDC117-201ENST00000249064 DENND4BO75064 1496 aaPredicted RBP17.13■□□□□ 0.33
CCDC117-201ENST00000249064 ANKRD50Q9ULJ7 1429 aa17.13■□□□□ 0.33
CCDC117-201ENST00000249064 TPRNQ4KMQ1 711 aa17.13■□□□□ 0.33
CCDC117-201ENST00000249064 CRBNQ96SW2 442 aa17.13■□□□□ 0.33
CCDC117-201ENST00000249064 BACH2Q9BYV9 841 aa17.12■□□□□ 0.33
CCDC117-201ENST00000249064 KTN1Q86UP2 1357 aaKnown RBP17.12■□□□□ 0.33
CCDC117-201ENST00000249064 CTTNBP2Q8WZ74 1663 aa17.11■□□□□ 0.33
CCDC117-201ENST00000249064 TMF1P82094 1093 aa17.11■□□□□ 0.33
CCDC117-201ENST00000249064 MIA2Q96PC5 1412 aa17.11■□□□□ 0.33
CCDC117-201ENST00000249064 CCDC146Q8IYE0 955 aa17.11■□□□□ 0.33
CCDC117-201ENST00000249064 KDM6BO15054 1643 aa17.1■□□□□ 0.33
CCDC117-201ENST00000249064 PNISRQ8TF01 805 aaKnown RBP17.1■□□□□ 0.33
CCDC117-201ENST00000249064 PLB1Q6P1J6 1458 aa17.1■□□□□ 0.33
CCDC117-201ENST00000249064 MAGI3Q5TCQ9 1506 aa17.1■□□□□ 0.33
CCDC117-201ENST00000249064 NLRP13Q86W25 1043 aa17.1■□□□□ 0.33
CCDC117-201ENST00000249064 RALBP1Q15311 655 aa17.09■□□□□ 0.33
CCDC117-201ENST00000249064 MYBBP1AQ9BQG0 1328 aaKnown RBP17.09■□□□□ 0.33
CCDC117-201ENST00000249064 FAM43AQ8N2R8 423 aa17.09■□□□□ 0.33
CCDC117-201ENST00000249064 POGKQ9P215 609 aa17.08■□□□□ 0.33
CCDC117-201ENST00000249064 KIF15Q9NS87 1388 aa17.08■□□□□ 0.32
CCDC117-201ENST00000249064 NCOA1Q15788 1441 aa17.08■□□□□ 0.32
CCDC117-201ENST00000249064 MYH16Q9H6N6 1097 aa17.08■□□□□ 0.32
CCDC117-201ENST00000249064 IQGAP2Q13576 1575 aa17.08■□□□□ 0.32
CCDC117-201ENST00000249064 HECW1Q76N89 1606 aa17.07■□□□□ 0.32
CCDC117-201ENST00000249064 UGGT2Q9NYU1 1516 aa17.07■□□□□ 0.32
CCDC117-201ENST00000249064 DNTTIP2Q5QJE6 756 aaKnown RBP17.06■□□□□ 0.32
CCDC117-201ENST00000249064 PLEKHG5O94827 1062 aa17.04■□□□□ 0.32
CCDC117-201ENST00000249064 FAM13BQ9NYF5 915 aa17.04■□□□□ 0.32
CCDC117-201ENST00000249064 KIAA1107Q9UPP5 1409 aa17.04■□□□□ 0.32
CCDC117-201ENST00000249064 CCDC144AA2RUR9 1427 aa17.03■□□□□ 0.32
CCDC117-201ENST00000249064 RPRD2Q5VT52 1461 aaKnown RBP17.03■□□□□ 0.32
CCDC117-201ENST00000249064 TROQ12816 1431 aaPredicted RBP17.02■□□□□ 0.32
CCDC117-201ENST00000249064 FAM161AQ3B820 660 aa17.02■□□□□ 0.32
CCDC117-201ENST00000249064 FOXD4L1Q9NU39 408 aa17.02■□□□□ 0.32
CCDC117-201ENST00000249064 RBM10P98175 930 aaKnown RBP17.02■□□□□ 0.31
CCDC117-201ENST00000249064 PTPRGP23470 1445 aa17.01■□□□□ 0.31
CCDC117-201ENST00000249064 SAFB2Q14151 953 aaKnown RBP eCLIP17.01■□□□□ 0.31
CCDC117-201ENST00000249064 MS4A1P11836 297 aa17.01■□□□□ 0.31
CCDC117-201ENST00000249064 SAMD9Q5K651 1589 aa17.01■□□□□ 0.31
CCDC117-201ENST00000249064 MSNP26038 577 aaKnown RBP17■□□□□ 0.31
CCDC117-201ENST00000249064 NUTM2DQ5VT03 806 aaPredicted RBP16.99■□□□□ 0.31
CCDC117-201ENST00000249064 MRC2Q9UBG0 1479 aa16.99■□□□□ 0.31
CCDC117-201ENST00000249064 C9orf84Q5VXU9 1444 aa16.97■□□□□ 0.31
CCDC117-201ENST00000249064 PTMAP06454 111 aaKnown RBP16.97■□□□□ 0.31
CCDC117-201ENST00000249064 CAMSAP2Q08AD1 1489 aa16.97■□□□□ 0.31
CCDC117-201ENST00000249064 ROCK1Q13464 1354 aa16.97■□□□□ 0.31
CCDC117-201ENST00000249064 KIF21AQ7Z4S6 1674 aa16.97■□□□□ 0.31
CCDC117-201ENST00000249064 KIF3BO15066 747 aa16.96■□□□□ 0.31
CCDC117-201ENST00000249064 ARHGEF11O15085 1522 aa16.96■□□□□ 0.31
CCDC117-201ENST00000249064 KIAA0586Q9BVV6 1533 aa16.96■□□□□ 0.31
CCDC117-201ENST00000249064 ADAMTS8Q9UP79 889 aa16.96■□□□□ 0.31
CCDC117-201ENST00000249064 NUP153P49790 1475 aaKnown RBP16.94■□□□□ 0.3
CCDC117-201ENST00000249064 RRP7AQ9Y3A4 280 aaKnown RBP16.94■□□□□ 0.3
CCDC117-201ENST00000249064 AFAP1Q8N556 730 aa16.94■□□□□ 0.3
CCDC117-201ENST00000249064 EFCAB2Q5VUJ9 269 aa16.93■□□□□ 0.3
CCDC117-201ENST00000249064 ABCA5Q8WWZ7 1642 aa16.93■□□□□ 0.3
CCDC117-201ENST00000249064 GGT6Q6P531 493 aa16.93■□□□□ 0.3
CCDC117-201ENST00000249064 MFAP1P55081 439 aaKnown RBP16.93■□□□□ 0.3
CCDC117-201ENST00000249064 HSP90AB1P08238 724 aaKnown RBP16.91■□□□□ 0.3
CCDC117-201ENST00000249064 SMG6Q86US8 1419 aaKnown RBP16.91■□□□□ 0.3
CCDC117-201ENST00000249064 APAF1O14727 1248 aa16.91■□□□□ 0.3
CCDC117-201ENST00000249064 PLCB2Q00722 1185 aa16.91■□□□□ 0.3
CCDC117-201ENST00000249064 CDCA8Q53HL2 280 aa16.9■□□□□ 0.3
CCDC117-201ENST00000249064 GPATCH8Q9UKJ3 1502 aaKnown RBP16.89■□□□□ 0.3
CCDC117-201ENST00000249064 CLUAP1Q96AJ1 413 aa16.89■□□□□ 0.3
CCDC117-201ENST00000249064 IFT140Q96RY7 1462 aa16.89■□□□□ 0.29
CCDC117-201ENST00000249064 RRAGDQ9NQL2 400 aaPredicted RBP16.89■□□□□ 0.29
CCDC117-201ENST00000249064 TCOF1Q13428 1488 aaKnown RBP16.89■□□□□ 0.29
CCDC117-201ENST00000249064 SPAG9O60271 1321 aaKnown RBP16.89■□□□□ 0.29
CCDC117-201ENST00000249064 GOLGA6L22H0YM25 854 aa16.89■□□□□ 0.29
CCDC117-201ENST00000249064 GOLGA2Q08379 1002 aa16.89■□□□□ 0.29
CCDC117-201ENST00000249064 BCL2L13Q9BXK5 485 aa16.89■□□□□ 0.29
CCDC117-201ENST00000249064 WASHC2CQ9Y4E1 1318 aa16.89■□□□□ 0.29
CCDC117-201ENST00000249064 GRIN2AQ12879 1464 aa16.88■□□□□ 0.29
CCDC117-201ENST00000249064 C20orf194Q5TEA3 1177 aa16.88■□□□□ 0.29
CCDC117-201ENST00000249064 TRAK1Q9UPV9 953 aa16.88■□□□□ 0.29
CCDC117-201ENST00000249064 BRD4O60885 1362 aaPredicted RBP16.88■□□□□ 0.29
CCDC117-201ENST00000249064 PDE3BQ13370 1112 aa16.87■□□□□ 0.29
CCDC117-201ENST00000249064 HSCBQ8IWL3 235 aa16.87■□□□□ 0.29
CCDC117-201ENST00000249064 PANK2Q9BZ23 570 aa16.87■□□□□ 0.29
CCDC117-201ENST00000249064 DHX29Q7Z478 1369 aaKnown RBP16.86■□□□□ 0.29
CCDC117-201ENST00000249064 RRP9O43818 475 aaKnown RBP16.86■□□□□ 0.29
CCDC117-201ENST00000249064 NPM1P06748 294 aaKnown RBP eCLIP16.86■□□□□ 0.29
CCDC117-201ENST00000249064 CENPQQ7L2Z9 268 aaPredicted RBP16.86■□□□□ 0.29
CCDC117-201ENST00000249064 STK26Q9P289 416 aa16.86■□□□□ 0.29
CCDC117-201ENST00000249064 WDR62O43379 1518 aa16.85■□□□□ 0.29
CCDC117-201ENST00000249064 GCC2Q8IWJ2 1684 aa16.85■□□□□ 0.29
CCDC117-201ENST00000249064 RSPH4AQ5TD94 716 aa16.85■□□□□ 0.29
CCDC117-201ENST00000249064 MORC1Q86VD1 984 aa16.85■□□□□ 0.29
CCDC117-201ENST00000249064 U2SURPO15042 1029 aaKnown RBP16.84■□□□□ 0.29
CCDC117-201ENST00000249064 CDK11BP21127 795 aaKnown RBP16.84■□□□□ 0.29
CCDC117-201ENST00000249064 PZPP20742 1482 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms