RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 U2SURPO15042 1029 aaKnown RBP14.97□□□□□ -0.01
SOX9-201ENST00000245479 ANP32BQ92688 251 aaKnown RBP14.97□□□□□ -0.01
SOX9-201ENST00000245479 CCDC144AA2RUR9 1427 aa14.97□□□□□ -0.01
SOX9-201ENST00000245479 NLRP13Q86W25 1043 aa14.97□□□□□ -0.01
SOX9-201ENST00000245479 SPRYD3Q8NCJ5 442 aa14.97□□□□□ -0.01
SOX9-201ENST00000245479 CRBNQ96SW2 442 aa14.97□□□□□ -0.01
SOX9-201ENST00000245479 SPAG9O60271 1321 aaKnown RBP14.96□□□□□ -0.01
SOX9-201ENST00000245479 CFAP70Q5T0N1 1121 aa14.96□□□□□ -0.01
SOX9-201ENST00000245479 BECN1Q14457 450 aa14.96□□□□□ -0.01
SOX9-201ENST00000245479 APAF1O14727 1248 aa14.95□□□□□ -0.02
SOX9-201ENST00000245479 GSE1Q14687 1217 aa14.95□□□□□ -0.02
SOX9-201ENST00000245479 NUTM2FA1L443 756 aa14.95□□□□□ -0.02
SOX9-201ENST00000245479 KDM6BO15054 1643 aa14.95□□□□□ -0.02
SOX9-201ENST00000245479 EHBP1L1Q8N3D4 1523 aa14.94□□□□□ -0.02
SOX9-201ENST00000245479 SUPT6HQ7KZ85 1726 aaKnown RBP14.94□□□□□ -0.02
SOX9-201ENST00000245479 MYBBP1AQ9BQG0 1328 aaKnown RBP14.94□□□□□ -0.02
SOX9-201ENST00000245479 HSP90AA1P07900 732 aaKnown RBP14.93□□□□□ -0.02
SOX9-201ENST00000245479 PDE4AP27815 886 aa14.93□□□□□ -0.02
SOX9-201ENST00000245479 TRIM44Q96DX7 344 aaPredicted RBP14.93□□□□□ -0.02
SOX9-201ENST00000245479 C20orf194Q5TEA3 1177 aa14.93□□□□□ -0.02
SOX9-201ENST00000245479 IQGAP2Q13576 1575 aa14.93□□□□□ -0.02
SOX9-201ENST00000245479 MRC2Q9UBG0 1479 aa14.92□□□□□ -0.02
SOX9-201ENST00000245479 RRP1P56182 461 aaKnown RBP14.91□□□□□ -0.02
SOX9-201ENST00000245479 NCOA1Q15788 1441 aa14.91□□□□□ -0.02
SOX9-201ENST00000245479 TROQ12816 1431 aaPredicted RBP14.91□□□□□ -0.02
SOX9-201ENST00000245479 BRPF3Q9ULD4 1205 aa14.91□□□□□ -0.02
SOX9-201ENST00000245479 MAP3K1Q13233 1512 aa14.9□□□□□ -0.02
SOX9-201ENST00000245479 C9orf84Q5VXU9 1444 aa14.9□□□□□ -0.02
SOX9-201ENST00000245479 RALBP1Q15311 655 aa14.9□□□□□ -0.02
SOX9-201ENST00000245479 ARID4BQ4LE39 1312 aaPredicted RBP14.89□□□□□ -0.03
SOX9-201ENST00000245479 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.89□□□□□ -0.03
SOX9-201ENST00000245479 SRPK2P78362 688 aaKnown RBP14.89□□□□□ -0.03
SOX9-201ENST00000245479 KIAA1107Q9UPP5 1409 aa14.89□□□□□ -0.03
SOX9-201ENST00000245479 MORC1Q86VD1 984 aa14.88□□□□□ -0.03
SOX9-201ENST00000245479 NUP153P49790 1475 aaKnown RBP14.88□□□□□ -0.03
SOX9-201ENST00000245479 RSPH6AQ9H0K4 717 aa14.88□□□□□ -0.03
SOX9-201ENST00000245479 MIA2Q96PC5 1412 aa14.87□□□□□ -0.03
SOX9-201ENST00000245479 CAMSAP2Q08AD1 1489 aa14.87□□□□□ -0.03
SOX9-201ENST00000245479 PNNQ9H307 717 aaKnown RBP14.86□□□□□ -0.03
SOX9-201ENST00000245479 KIAA0586Q9BVV6 1533 aa14.86□□□□□ -0.03
SOX9-201ENST00000245479 VSIG10Q8N0Z9 540 aa14.86□□□□□ -0.03
SOX9-201ENST00000245479 U2AF1L5P0DN76 240 aaPredicted RBP14.85□□□□□ -0.03
SOX9-201ENST00000245479 U2AF1Q01081 240 aaKnown RBP eCLIP14.85□□□□□ -0.033e-6■□□□□ 8.5
SOX9-201ENST00000245479 UGGT2Q9NYU1 1516 aa14.85□□□□□ -0.03
SOX9-201ENST00000245479 ELL2O00472 640 aaPredicted RBP14.85□□□□□ -0.03
SOX9-201ENST00000245479 L1TD1Q5T7N2 865 aaKnown RBP14.85□□□□□ -0.03
SOX9-201ENST00000245479 LAMC3Q9Y6N6 1575 aa14.84□□□□□ -0.03
SOX9-201ENST00000245479 SLKQ9H2G2 1235 aaPredicted RBP14.84□□□□□ -0.03
SOX9-201ENST00000245479 SLC12A5Q9H2X9 1139 aa14.84□□□□□ -0.03
SOX9-201ENST00000245479 BCAR3O75815 825 aa14.84□□□□□ -0.03
SOX9-201ENST00000245479 COG6Q9Y2V7 657 aa14.84□□□□□ -0.03
SOX9-201ENST00000245479 KIF21AQ7Z4S6 1674 aa14.84□□□□□ -0.03
SOX9-201ENST00000245479 GRIN2AQ12879 1464 aa14.84□□□□□ -0.03
SOX9-201ENST00000245479 POGKQ9P215 609 aa14.84□□□□□ -0.03
SOX9-201ENST00000245479 HECW1Q76N89 1606 aa14.83□□□□□ -0.04
SOX9-201ENST00000245479 CUL7Q14999 1698 aa14.83□□□□□ -0.04
SOX9-201ENST00000245479 GPATCH8Q9UKJ3 1502 aaKnown RBP14.83□□□□□ -0.04
SOX9-201ENST00000245479 RPRD2Q5VT52 1461 aaKnown RBP14.83□□□□□ -0.04
SOX9-201ENST00000245479 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.83□□□□□ -0.04
SOX9-201ENST00000245479 CYB5RLQ6IPT4 315 aa14.82□□□□□ -0.04
SOX9-201ENST00000245479 RAPGEF3O95398 923 aa14.82□□□□□ -0.04
SOX9-201ENST00000245479 GOLGA2Q08379 1002 aa14.82□□□□□ -0.04
SOX9-201ENST00000245479 WASHC2CQ9Y4E1 1318 aa14.81□□□□□ -0.04
SOX9-201ENST00000245479 ZBTB7CA1YPR0 619 aa14.81□□□□□ -0.04
SOX9-201ENST00000245479 IFT140Q96RY7 1462 aa14.81□□□□□ -0.04
SOX9-201ENST00000245479 FBLN1P23142 703 aa14.8□□□□□ -0.04
SOX9-201ENST00000245479 PANK1Q8TE04 598 aa14.8□□□□□ -0.04
SOX9-201ENST00000245479 NFKBIBQ15653 356 aa14.8□□□□□ -0.04
SOX9-201ENST00000245479 GZF1Q9H116 711 aaPredicted RBP14.8□□□□□ -0.04
SOX9-201ENST00000245479 ARHGAP5Q13017 1502 aa14.79□□□□□ -0.04
SOX9-201ENST00000245479 CABP2Q9NPB3 220 aa14.79□□□□□ -0.04
SOX9-201ENST00000245479 DISP3Q9P2K9 1392 aa14.79□□□□□ -0.04
SOX9-201ENST00000245479 MINK1Q8N4C8 1332 aaPredicted RBP14.79□□□□□ -0.04
SOX9-201ENST00000245479 PPP2R1AP30153 589 aa14.78□□□□□ -0.04
SOX9-201ENST00000245479 CFAP43Q8NDM7 1665 aa14.78□□□□□ -0.04
SOX9-201ENST00000245479 APBB1O00213 710 aa14.77□□□□□ -0.04
SOX9-201ENST00000245479 HSP90AA2PQ14568 343 aaPredicted RBP14.77□□□□□ -0.04
SOX9-201ENST00000245479 PLEKHH2Q8IVE3 1493 aa14.77□□□□□ -0.04
SOX9-201ENST00000245479 ESF1Q9H501 851 aaKnown RBP14.77□□□□□ -0.04
SOX9-201ENST00000245479 SCAPERQ9BY12 1400 aa14.77□□□□□ -0.05
SOX9-201ENST00000245479 CDCA8Q53HL2 280 aa14.77□□□□□ -0.05
SOX9-201ENST00000245479 GGNBP2Q9H3C7 697 aa14.76□□□□□ -0.05
SOX9-201ENST00000245479 CTTNBP2Q8WZ74 1663 aa14.76□□□□□ -0.05
SOX9-201ENST00000245479 ATP10BO94823 1461 aa14.76□□□□□ -0.05
SOX9-201ENST00000245479 DENND4BO75064 1496 aaPredicted RBP14.75□□□□□ -0.05
SOX9-201ENST00000245479 DISP1Q96F81 1524 aa14.75□□□□□ -0.05
SOX9-201ENST00000245479 FTSJ3Q8IY81 847 aaKnown RBP14.75□□□□□ -0.05
SOX9-201ENST00000245479 MAGI1Q96QZ7 1491 aaPredicted RBP14.75□□□□□ -0.05
SOX9-201ENST00000245479 MS4A1P11836 297 aa14.74□□□□□ -0.05
SOX9-201ENST00000245479 TPRNQ4KMQ1 711 aa14.74□□□□□ -0.05
SOX9-201ENST00000245479 ROCK1Q13464 1354 aa14.74□□□□□ -0.05
SOX9-201ENST00000245479 ADGRF5Q8IZF2 1346 aa14.73□□□□□ -0.05
SOX9-201ENST00000245479 C14orf37Q86TY3 774 aa14.73□□□□□ -0.05
SOX9-201ENST00000245479 PKNOX2Q96KN3 472 aa14.72□□□□□ -0.05
SOX9-201ENST00000245479 RSPH4AQ5TD94 716 aa14.72□□□□□ -0.05
SOX9-201ENST00000245479 DHX29Q7Z478 1369 aaKnown RBP14.72□□□□□ -0.05
SOX9-201ENST00000245479 KANK1Q14678 1352 aa14.71□□□□□ -0.05
SOX9-201ENST00000245479 PZPP20742 1482 aa14.71□□□□□ -0.05
SOX9-201ENST00000245479 SYNJ2O15056 1496 aa14.71□□□□□ -0.05
SOX9-201ENST00000245479 MTHFSP49914 203 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms