RNA–Protein interactions for RNA: ENST00000245414.8

IRF1-201, Transcript of interferon regulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-201ENST00000245414 UTP14CQ5TAP6 766 aaKnown RBP12.39□□□□□ -0.43
IRF1-201ENST00000245414 CBX1P83916 185 aa12.38□□□□□ -0.43
IRF1-201ENST00000245414 ZNF830Q96NB3 372 aaPredicted RBP12.38□□□□□ -0.43
IRF1-201ENST00000245414 NCOA2Q15596 1464 aa12.37□□□□□ -0.43
IRF1-201ENST00000245414 LAMC3Q9Y6N6 1575 aa12.37□□□□□ -0.43
IRF1-201ENST00000245414 C20orf194Q5TEA3 1177 aa12.37□□□□□ -0.43
IRF1-201ENST00000245414 TMEM51Q9NW97 253 aa12.37□□□□□ -0.43
IRF1-201ENST00000245414 CGNQ9P2M7 1197 aaKnown RBP12.36□□□□□ -0.43
IRF1-201ENST00000245414 XPCQ01831 940 aaPredicted RBP12.36□□□□□ -0.43
IRF1-201ENST00000245414 E9PSI1 815 aa12.35□□□□□ -0.43
IRF1-201ENST00000245414 FTSJ3Q8IY81 847 aaKnown RBP12.35□□□□□ -0.43
IRF1-201ENST00000245414 CCDC94Q9BW85 323 aaPredicted RBP12.35□□□□□ -0.43
IRF1-201ENST00000245414 CHMP4AQ9BY43 222 aa12.35□□□□□ -0.43
IRF1-201ENST00000245414 DNMBPQ6XZF7 1577 aa12.35□□□□□ -0.43
IRF1-201ENST00000245414 DDX11L8A8MPP1 907 aa12.35□□□□□ -0.43
IRF1-201ENST00000245414 CCDC173Q0VFZ6 552 aa12.35□□□□□ -0.43
IRF1-201ENST00000245414 L3MBTL2Q969R5 705 aa12.35□□□□□ -0.43
IRF1-201ENST00000245414 ISY1Q9ULR0 285 aaKnown RBP12.35□□□□□ -0.43
IRF1-201ENST00000245414 TOPBP1Q92547 1522 aa12.34□□□□□ -0.43
IRF1-201ENST00000245414 KIF20AO95235 890 aa12.34□□□□□ -0.43
IRF1-201ENST00000245414 NASPP49321 788 aaPredicted RBP12.34□□□□□ -0.43
IRF1-201ENST00000245414 ZSCAN20P17040 1043 aaPredicted RBP12.34□□□□□ -0.43
IRF1-201ENST00000245414 PDE3BQ13370 1112 aa12.34□□□□□ -0.43
IRF1-201ENST00000245414 CHMP5Q9NZZ3 219 aa12.34□□□□□ -0.43
IRF1-201ENST00000245414 DYNC1I1O14576 645 aa12.34□□□□□ -0.43
IRF1-201ENST00000245414 TERF1P54274 439 aa12.34□□□□□ -0.43
IRF1-201ENST00000245414 RSPH4AQ5TD94 716 aa12.34□□□□□ -0.43
IRF1-201ENST00000245414 SENP3Q9H4L4 574 aaPredicted RBP12.34□□□□□ -0.43
IRF1-201ENST00000245414 IGF1RP08069 1367 aa12.34□□□□□ -0.43
IRF1-201ENST00000245414 CCDC18Q5T9S5 1454 aa12.33□□□□□ -0.44
IRF1-201ENST00000245414 LRRC9Q6ZRR7 1453 aa12.33□□□□□ -0.44
IRF1-201ENST00000245414 NCOA1Q15788 1441 aa12.33□□□□□ -0.44
IRF1-201ENST00000245414 SEC24BO95487 1268 aa12.33□□□□□ -0.44
IRF1-201ENST00000245414 TBC1D2Q9BYX2 928 aa12.33□□□□□ -0.44
IRF1-201ENST00000245414 ANTXR1Q9H6X2 564 aa12.33□□□□□ -0.44
IRF1-201ENST00000245414 ZFP91Q96JP5 570 aaPredicted RBP12.33□□□□□ -0.44
IRF1-201ENST00000245414 ZBTB22O15209 634 aa12.32□□□□□ -0.44
IRF1-201ENST00000245414 LETM1O95202 739 aaPredicted RBP12.32□□□□□ -0.44
IRF1-201ENST00000245414 GTPBP4Q9BZE4 634 aaKnown RBP12.32□□□□□ -0.44
IRF1-201ENST00000245414 IGSF3O75054 1194 aa12.31□□□□□ -0.44
IRF1-201ENST00000245414 POLA1P09884 1462 aaPredicted RBP12.31□□□□□ -0.44
IRF1-201ENST00000245414 RAD54L2Q9Y4B4 1467 aa12.31□□□□□ -0.44
IRF1-201ENST00000245414 MAP3K1Q13233 1512 aa12.31□□□□□ -0.44
IRF1-201ENST00000245414 KDM2BQ8NHM5 1336 aa12.31□□□□□ -0.44
IRF1-201ENST00000245414 GAS2L3Q86XJ1 694 aa12.31□□□□□ -0.44
IRF1-201ENST00000245414 URB2Q14146 1524 aaKnown RBP12.31□□□□□ -0.44
IRF1-201ENST00000245414 ZNF771Q7L3S4 317 aaPredicted RBP12.3□□□□□ -0.44
IRF1-201ENST00000245414 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.3□□□□□ -0.44
IRF1-201ENST00000245414 ZNF777Q9ULD5 760 aaPredicted RBP12.3□□□□□ -0.44
IRF1-201ENST00000245414 TIAM1Q13009 1591 aa12.29□□□□□ -0.44
IRF1-201ENST00000245414 DHX37Q8IY37 1157 aaKnown RBP12.29□□□□□ -0.44
IRF1-201ENST00000245414 CSPP1Q1MSJ5 1256 aa12.28□□□□□ -0.44
IRF1-201ENST00000245414 KIF21AQ7Z4S6 1674 aa12.28□□□□□ -0.44
IRF1-201ENST00000245414 ABCA10Q8WWZ4 1543 aa12.28□□□□□ -0.44
IRF1-201ENST00000245414 AEBP1Q8IUX7 1158 aa12.27□□□□□ -0.44
IRF1-201ENST00000245414 USP19O94966 1318 aa12.27□□□□□ -0.45
IRF1-201ENST00000245414 TAF3Q5VWG9 929 aa12.27□□□□□ -0.45
IRF1-201ENST00000245414 SASS6Q6UVJ0 657 aa12.27□□□□□ -0.45
IRF1-201ENST00000245414 NBPF8Q3BBV2 869 aa12.26□□□□□ -0.45
IRF1-201ENST00000245414 GBP4Q96PP9 640 aa12.26□□□□□ -0.45
IRF1-201ENST00000245414 AQRO60306 1485 aaKnown RBP eCLIP12.26□□□□□ -0.451e-6■■■■□ 25.5
IRF1-201ENST00000245414 UACAQ9BZF9 1416 aa12.26□□□□□ -0.45
IRF1-201ENST00000245414 PDS5BQ9NTI5 1447 aa12.26□□□□□ -0.45
IRF1-201ENST00000245414 SPDYE4A6NLX3 237 aa12.25□□□□□ -0.45
IRF1-201ENST00000245414 CARMIL1Q5VZK9 1371 aa12.25□□□□□ -0.45
IRF1-201ENST00000245414 IRX3P78415 501 aaPredicted RBP12.25□□□□□ -0.45
IRF1-201ENST00000245414 HSCBQ8IWL3 235 aa12.25□□□□□ -0.45
IRF1-201ENST00000245414 MTUS2Q5JR59 1369 aa12.24□□□□□ -0.45
IRF1-201ENST00000245414 PTMAP06454 111 aaKnown RBP12.24□□□□□ -0.45
IRF1-201ENST00000245414 CERS3Q8IU89 383 aa12.24□□□□□ -0.45
IRF1-201ENST00000245414 KCNJ4P48050 445 aa12.23□□□□□ -0.45
IRF1-201ENST00000245414 SKOR2Q2VWA4 1001 aaPredicted RBP12.23□□□□□ -0.45
IRF1-201ENST00000245414 TSC1Q92574 1164 aa12.23□□□□□ -0.45
IRF1-201ENST00000245414 GOLGA6L22H0YM25 854 aa12.23□□□□□ -0.45
IRF1-201ENST00000245414 SECISBP2LQ93073 1101 aaKnown RBP12.22□□□□□ -0.45
IRF1-201ENST00000245414 MYBBP1AQ9BQG0 1328 aaKnown RBP12.22□□□□□ -0.45
IRF1-201ENST00000245414 PPP1R9BQ96SB3 815 aa12.22□□□□□ -0.45
IRF1-201ENST00000245414 FHOD3Q2V2M9 1422 aa12.22□□□□□ -0.45
IRF1-201ENST00000245414 PTPRKQ15262 1439 aa12.21□□□□□ -0.45
IRF1-201ENST00000245414 DDX49Q9Y6V7 483 aaKnown RBP12.21□□□□□ -0.45
IRF1-201ENST00000245414 MAPK8IP3Q9UPT6 1336 aa12.21□□□□□ -0.45
IRF1-201ENST00000245414 MPHOSPH9Q99550 1183 aa12.21□□□□□ -0.46
IRF1-201ENST00000245414 BRD2P25440 801 aaKnown RBP12.2□□□□□ -0.46
IRF1-201ENST00000245414 MFAP1P55081 439 aaKnown RBP12.2□□□□□ -0.46
IRF1-201ENST00000245414 DHX29Q7Z478 1369 aaKnown RBP12.2□□□□□ -0.46
IRF1-201ENST00000245414 FOXD4L1Q9NU39 408 aa12.2□□□□□ -0.46
IRF1-201ENST00000245414 TBC1D32Q96NH3 1257 aa12.2□□□□□ -0.46
IRF1-201ENST00000245414 PANK3Q9H999 370 aa12.2□□□□□ -0.46
IRF1-201ENST00000245414 HSP90AB1P08238 724 aaKnown RBP12.19□□□□□ -0.46
IRF1-201ENST00000245414 JARID2Q92833 1246 aaPredicted RBP12.19□□□□□ -0.46
IRF1-201ENST00000245414 NOL7Q9UMY1 257 aaKnown RBP12.19□□□□□ -0.46
IRF1-201ENST00000245414 FAM177BA6PVY3 158 aa12.19□□□□□ -0.46
IRF1-201ENST00000245414 FMN1Q68DA7 1419 aa12.19□□□□□ -0.46
IRF1-201ENST00000245414 FGD6Q6ZV73 1430 aa12.18□□□□□ -0.46
IRF1-201ENST00000245414 BRD4O60885 1362 aaPredicted RBP12.18□□□□□ -0.46
IRF1-201ENST00000245414 ZNF500O60304 480 aaPredicted RBP12.18□□□□□ -0.46
IRF1-201ENST00000245414 RALBP1Q15311 655 aa12.18□□□□□ -0.46
IRF1-201ENST00000245414 TEX2Q8IWB9 1127 aa12.18□□□□□ -0.46
IRF1-201ENST00000245414 TNPO1Q92973 898 aaKnown RBP12.18□□□□□ -0.46
IRF1-201ENST00000245414 ABCA5Q8WWZ7 1642 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms