RNA–Protein interactions for RNA: ENST00000245105.7

SH3TC1-201, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SH3TC1, Length 4,226 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-201ENST00000245105 SAFB2Q14151 953 aaKnown RBP eCLIP17.17■□□□□ 0.34
SH3TC1-201ENST00000245105 FRAT2O75474 233 aaPredicted RBP17.16■□□□□ 0.34
SH3TC1-201ENST00000245105 NUTM2DQ5VT03 806 aaPredicted RBP17.16■□□□□ 0.34
SH3TC1-201ENST00000245105 CD109Q6YHK3 1445 aa17.15■□□□□ 0.34
SH3TC1-201ENST00000245105 SMG6Q86US8 1419 aaKnown RBP17.13■□□□□ 0.33
SH3TC1-201ENST00000245105 HDGFP51858 240 aaKnown RBP17.13■□□□□ 0.33
SH3TC1-201ENST00000245105 PKNOX2Q96KN3 472 aa17.13■□□□□ 0.33
SH3TC1-201ENST00000245105 CRBNQ96SW2 442 aa17.13■□□□□ 0.33
SH3TC1-201ENST00000245105 EFCAB5A4FU69 1503 aa17.12■□□□□ 0.33
SH3TC1-201ENST00000245105 GZF1Q9H116 711 aaPredicted RBP17.12■□□□□ 0.33
SH3TC1-201ENST00000245105 LMOD2Q6P5Q4 547 aa17.12■□□□□ 0.33
SH3TC1-201ENST00000245105 SPRYD3Q8NCJ5 442 aa17.12■□□□□ 0.33
SH3TC1-201ENST00000245105 MS4A1P11836 297 aa17.11■□□□□ 0.33
SH3TC1-201ENST00000245105 NBPF8Q3BBV2 869 aa17.11■□□□□ 0.33
SH3TC1-201ENST00000245105 BIVM-ERCC5R4GMW8 1640 aa17.1■□□□□ 0.33
SH3TC1-201ENST00000245105 POGKQ9P215 609 aa17.1■□□□□ 0.33
SH3TC1-201ENST00000245105 KTN1Q86UP2 1357 aaKnown RBP17.09■□□□□ 0.33
SH3TC1-201ENST00000245105 HAP1P54257 671 aaPredicted RBP17.09■□□□□ 0.33
SH3TC1-201ENST00000245105 CDCA7LQ96GN5 454 aa17.09■□□□□ 0.33
SH3TC1-201ENST00000245105 USP47Q96K76 1375 aa17.09■□□□□ 0.33
SH3TC1-201ENST00000245105 PCF11O94913 1555 aaKnown RBP17.08■□□□□ 0.32
SH3TC1-201ENST00000245105 CFAP53Q96M91 514 aa17.08■□□□□ 0.32
SH3TC1-201ENST00000245105 EID1Q9Y6B2 187 aa17.08■□□□□ 0.32
SH3TC1-201ENST00000245105 SCAPERQ9BY12 1400 aa17.08■□□□□ 0.32
SH3TC1-201ENST00000245105 ZBTB7CA1YPR0 619 aa17.07■□□□□ 0.32
SH3TC1-201ENST00000245105 PNNQ9H307 717 aaKnown RBP17.07■□□□□ 0.32
SH3TC1-201ENST00000245105 STK26Q9P289 416 aa17.07■□□□□ 0.32
SH3TC1-201ENST00000245105 THOC2Q8NI27 1593 aaKnown RBP17.07■□□□□ 0.32
SH3TC1-201ENST00000245105 CUL7Q14999 1698 aa17.07■□□□□ 0.32
SH3TC1-201ENST00000245105 ARHGAP5Q13017 1502 aa17.07■□□□□ 0.32
SH3TC1-201ENST00000245105 CCDC144AA2RUR9 1427 aa17.06■□□□□ 0.32
SH3TC1-201ENST00000245105 BECN1Q14457 450 aa17.06■□□□□ 0.32
SH3TC1-201ENST00000245105 UPF2Q9HAU5 1272 aaKnown RBP17.06■□□□□ 0.32
SH3TC1-201ENST00000245105 KIF15Q9NS87 1388 aa17.06■□□□□ 0.32
SH3TC1-201ENST00000245105 HFM1A2PYH4 1435 aa17.05■□□□□ 0.32
SH3TC1-201ENST00000245105 RALBP1Q15311 655 aa17.04■□□□□ 0.32
SH3TC1-201ENST00000245105 PNISRQ8TF01 805 aaKnown RBP17.04■□□□□ 0.32
SH3TC1-201ENST00000245105 CDK13Q14004 1512 aaKnown RBP17.04■□□□□ 0.32
SH3TC1-201ENST00000245105 ANKRD50Q9ULJ7 1429 aa17.04■□□□□ 0.32
SH3TC1-201ENST00000245105 HSP90AA1P07900 732 aaKnown RBP17.03■□□□□ 0.32
SH3TC1-201ENST00000245105 U2SURPO15042 1029 aaKnown RBP17.03■□□□□ 0.32
SH3TC1-201ENST00000245105 ASXL2Q76L83 1435 aa17.02■□□□□ 0.32
SH3TC1-201ENST00000245105 HSP90AA2PQ14568 343 aaPredicted RBP17.02■□□□□ 0.32
SH3TC1-201ENST00000245105 SRPK2P78362 688 aaKnown RBP17.02■□□□□ 0.31
SH3TC1-201ENST00000245105 FAM161AQ3B820 660 aa17.01■□□□□ 0.31
SH3TC1-201ENST00000245105 NAIPQ13075 1403 aa17.01■□□□□ 0.31
SH3TC1-201ENST00000245105 MORC1Q86VD1 984 aa17.01■□□□□ 0.31
SH3TC1-201ENST00000245105 NLRP13Q86W25 1043 aa17.01■□□□□ 0.31
SH3TC1-201ENST00000245105 A0A0G2JS52 829 aa17■□□□□ 0.31
SH3TC1-201ENST00000245105 L1TD1Q5T7N2 865 aaKnown RBP17■□□□□ 0.31
SH3TC1-201ENST00000245105 FAM43AQ8N2R8 423 aa17■□□□□ 0.31
SH3TC1-201ENST00000245105 PANK3Q9H999 370 aa17■□□□□ 0.31
SH3TC1-201ENST00000245105 TROQ12816 1431 aaPredicted RBP17■□□□□ 0.31
SH3TC1-201ENST00000245105 EHBP1L1Q8N3D4 1523 aa16.99■□□□□ 0.31
SH3TC1-201ENST00000245105 ADAMTS12P58397 1594 aa16.99■□□□□ 0.31
SH3TC1-201ENST00000245105 NUP160Q12769 1436 aa16.99■□□□□ 0.31
SH3TC1-201ENST00000245105 TRIM44Q96DX7 344 aaPredicted RBP16.98■□□□□ 0.31
SH3TC1-201ENST00000245105 EPRSP07814 1512 aaKnown RBP16.98■□□□□ 0.31
SH3TC1-201ENST00000245105 CEBPAP49715 358 aaPredicted RBP16.96■□□□□ 0.31
SH3TC1-201ENST00000245105 TRAK1Q9UPV9 953 aa16.96■□□□□ 0.31
SH3TC1-201ENST00000245105 MYBBP1AQ9BQG0 1328 aaKnown RBP16.96■□□□□ 0.31
SH3TC1-201ENST00000245105 MAPK8IP3Q9UPT6 1336 aa16.95■□□□□ 0.3
SH3TC1-201ENST00000245105 MIA2Q96PC5 1412 aa16.95■□□□□ 0.3
SH3TC1-201ENST00000245105 NCOA1Q15788 1441 aa16.95■□□□□ 0.3
SH3TC1-201ENST00000245105 ARHGEF11O15085 1522 aa16.94■□□□□ 0.3
SH3TC1-201ENST00000245105 TARBP1Q13395 1621 aaKnown RBP16.94■□□□□ 0.3
SH3TC1-201ENST00000245105 CCDC146Q8IYE0 955 aa16.94■□□□□ 0.3
SH3TC1-201ENST00000245105 PDE3BQ13370 1112 aa16.93■□□□□ 0.3
SH3TC1-201ENST00000245105 GOLGA6L3A6NEY3 463 aa16.93■□□□□ 0.3
SH3TC1-201ENST00000245105 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.93■□□□□ 0.38e-7■■■■□ 22.9
SH3TC1-201ENST00000245105 PTPRKQ15262 1439 aa16.92■□□□□ 0.3
SH3TC1-201ENST00000245105 NUTM2FA1L443 756 aa16.92■□□□□ 0.3
SH3TC1-201ENST00000245105 CENPQQ7L2Z9 268 aaPredicted RBP16.92■□□□□ 0.3
SH3TC1-201ENST00000245105 C20orf194Q5TEA3 1177 aa16.91■□□□□ 0.3
SH3TC1-201ENST00000245105 FTSJ3Q8IY81 847 aaKnown RBP16.91■□□□□ 0.3
SH3TC1-201ENST00000245105 SOX12O15370 315 aa16.91■□□□□ 0.3
SH3TC1-201ENST00000245105 ARID3AQ99856 593 aa16.91■□□□□ 0.3
SH3TC1-201ENST00000245105 DAPK1P53355 1430 aa16.9■□□□□ 0.3
SH3TC1-201ENST00000245105 MAP3K1Q13233 1512 aa16.9■□□□□ 0.3
SH3TC1-201ENST00000245105 HECW1Q76N89 1606 aa16.9■□□□□ 0.3
SH3TC1-201ENST00000245105 SUPT6HQ7KZ85 1726 aaKnown RBP16.9■□□□□ 0.3
SH3TC1-201ENST00000245105 NBPF1Q3BBV0 1214 aa16.89■□□□□ 0.29
SH3TC1-201ENST00000245105 CEP170Q5SW79 1584 aa16.89■□□□□ 0.29
SH3TC1-201ENST00000245105 POGZQ7Z3K3 1410 aa16.88■□□□□ 0.29
SH3TC1-201ENST00000245105 U2AF1L5P0DN76 240 aaPredicted RBP16.88■□□□□ 0.29
SH3TC1-201ENST00000245105 U2AF1Q01081 240 aaKnown RBP eCLIP16.88■□□□□ 0.293e-7■□□□□ 9.6
SH3TC1-201ENST00000245105 ATP10BO94823 1461 aa16.87■□□□□ 0.29
SH3TC1-201ENST00000245105 C9orf84Q5VXU9 1444 aa16.86■□□□□ 0.29
SH3TC1-201ENST00000245105 ZMYND15Q9H091 742 aa16.86■□□□□ 0.29
SH3TC1-201ENST00000245105 ANP32BQ92688 251 aaKnown RBP16.86■□□□□ 0.29
SH3TC1-201ENST00000245105 RNF123Q5XPI4 1314 aa16.86■□□□□ 0.29
SH3TC1-201ENST00000245105 ADGRL1O94910 1474 aa16.85■□□□□ 0.29
SH3TC1-201ENST00000245105 EIF3AQ14152 1382 aaKnown RBP16.84■□□□□ 0.29
SH3TC1-201ENST00000245105 PBRM1Q86U86 1689 aa16.83■□□□□ 0.29
SH3TC1-201ENST00000245105 ABCA5Q8WWZ7 1642 aa16.83■□□□□ 0.28
SH3TC1-201ENST00000245105 KIAA1107Q9UPP5 1409 aa16.83■□□□□ 0.28
SH3TC1-201ENST00000245105 FANCAO15360 1455 aa16.82■□□□□ 0.28
SH3TC1-201ENST00000245105 GOLGA2Q08379 1002 aa16.82■□□□□ 0.28
SH3TC1-201ENST00000245105 TXNDC2Q86VQ3 553 aa16.82■□□□□ 0.28
SH3TC1-201ENST00000245105 DENND4BO75064 1496 aaPredicted RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms