RNA–Protein interactions for RNA: ENST00000242994.3

NEUROD4-201, Transcript of neuronal differentiation 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEUROD4, Length 3,953 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4-201ENST00000242994 RSPH4AQ5TD94 716 aa9.5□□□□□ -0.89
NEUROD4-201ENST00000242994 ITPRIPQ8IWB1 547 aa9.5□□□□□ -0.89
NEUROD4-201ENST00000242994 AFAP1Q8N556 730 aa9.5□□□□□ -0.89
NEUROD4-201ENST00000242994 NUTM2FA1L443 756 aa9.49□□□□□ -0.89
NEUROD4-201ENST00000242994 GZF1Q9H116 711 aaPredicted RBP9.49□□□□□ -0.89
NEUROD4-201ENST00000242994 COG6Q9Y2V7 657 aa9.49□□□□□ -0.89
NEUROD4-201ENST00000242994 FANCIQ9NVI1 1328 aa9.49□□□□□ -0.89
NEUROD4-201ENST00000242994 WASHC2CQ9Y4E1 1318 aa9.48□□□□□ -0.89
NEUROD4-201ENST00000242994 ADAMTS8Q9UP79 889 aa9.48□□□□□ -0.89
NEUROD4-201ENST00000242994 EFCAB5A4FU69 1503 aa9.48□□□□□ -0.89
NEUROD4-201ENST00000242994 CENPJQ9HC77 1338 aaPredicted RBP9.48□□□□□ -0.89
NEUROD4-201ENST00000242994 ELL2O00472 640 aaPredicted RBP9.48□□□□□ -0.89
NEUROD4-201ENST00000242994 LMOD2Q6P5Q4 547 aa9.48□□□□□ -0.89
NEUROD4-201ENST00000242994 PAK3O75914 559 aaPredicted RBP9.48□□□□□ -0.89
NEUROD4-201ENST00000242994 SKAP1Q86WV1 359 aa9.48□□□□□ -0.89
NEUROD4-201ENST00000242994 SMC4Q9NTJ3 1288 aa9.48□□□□□ -0.89
NEUROD4-201ENST00000242994 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.47□□□□□ -0.89
NEUROD4-201ENST00000242994 PEG3Q9GZU2 1588 aa9.47□□□□□ -0.89
NEUROD4-201ENST00000242994 MAPKBP1O60336 1514 aa9.47□□□□□ -0.89
NEUROD4-201ENST00000242994 PNISRQ8TF01 805 aaKnown RBP9.47□□□□□ -0.89
NEUROD4-201ENST00000242994 PTPRKQ15262 1439 aa9.46□□□□□ -0.89
NEUROD4-201ENST00000242994 GRIN2BQ13224 1484 aa9.46□□□□□ -0.89
NEUROD4-201ENST00000242994 MFAP1P55081 439 aaKnown RBP9.46□□□□□ -0.89
NEUROD4-201ENST00000242994 HSP90AB1P08238 724 aaKnown RBP9.46□□□□□ -0.9
NEUROD4-201ENST00000242994 EHBP1L1Q8N3D4 1523 aa9.46□□□□□ -0.9
NEUROD4-201ENST00000242994 TMEM132EQ6IEE7 984 aa9.45□□□□□ -0.9
NEUROD4-201ENST00000242994 TRIM44Q96DX7 344 aaPredicted RBP9.45□□□□□ -0.9
NEUROD4-201ENST00000242994 DAPK1P53355 1430 aa9.45□□□□□ -0.9
NEUROD4-201ENST00000242994 EPRSP07814 1512 aaKnown RBP9.45□□□□□ -0.9
NEUROD4-201ENST00000242994 ABCA10Q8WWZ4 1543 aa9.45□□□□□ -0.9
NEUROD4-201ENST00000242994 DNMBPQ6XZF7 1577 aa9.45□□□□□ -0.9
NEUROD4-201ENST00000242994 EIF3AQ14152 1382 aaKnown RBP9.45□□□□□ -0.9
NEUROD4-201ENST00000242994 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.45□□□□□ -0.9
NEUROD4-201ENST00000242994 CFAP70Q5T0N1 1121 aa9.44□□□□□ -0.9
NEUROD4-201ENST00000242994 A0A0G2JS52 829 aa9.43□□□□□ -0.9
NEUROD4-201ENST00000242994 MSH5O43196 834 aa9.43□□□□□ -0.9
NEUROD4-201ENST00000242994 KIAA1107Q9UPP5 1409 aa9.43□□□□□ -0.9
NEUROD4-201ENST00000242994 FOXD4L1Q9NU39 408 aa9.43□□□□□ -0.9
NEUROD4-201ENST00000242994 MINK1Q8N4C8 1332 aaPredicted RBP9.43□□□□□ -0.9
NEUROD4-201ENST00000242994 BIVM-ERCC5R4GMW8 1640 aa9.43□□□□□ -0.9
NEUROD4-201ENST00000242994 HDGFL2Q7Z4V5 671 aaPredicted RBP9.43□□□□□ -0.9
NEUROD4-201ENST00000242994 HSCBQ8IWL3 235 aa9.42□□□□□ -0.9
NEUROD4-201ENST00000242994 C9orf84Q5VXU9 1444 aa9.42□□□□□ -0.9
NEUROD4-201ENST00000242994 MIA2Q96PC5 1412 aa9.42□□□□□ -0.9
NEUROD4-201ENST00000242994 SUPT6HQ7KZ85 1726 aaKnown RBP9.42□□□□□ -0.9
NEUROD4-201ENST00000242994 RWDD1Q9H446 243 aaPredicted RBP9.42□□□□□ -0.9
NEUROD4-201ENST00000242994 GOLGA6L22H0YM25 854 aa9.42□□□□□ -0.9
NEUROD4-201ENST00000242994 PANK1Q8TE04 598 aa9.42□□□□□ -0.9
NEUROD4-201ENST00000242994 CENPQQ7L2Z9 268 aaPredicted RBP9.41□□□□□ -0.9
NEUROD4-201ENST00000242994 ANKRD30BQ9BXX2 1392 aa9.41□□□□□ -0.9
NEUROD4-201ENST00000242994 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.41□□□□□ -0.9
NEUROD4-201ENST00000242994 TROQ12816 1431 aaPredicted RBP9.41□□□□□ -0.9
NEUROD4-201ENST00000242994 MS4A1P11836 297 aa9.41□□□□□ -0.9
NEUROD4-201ENST00000242994 SNAPC4Q5SXM2 1469 aa9.41□□□□□ -0.9
NEUROD4-201ENST00000242994 FAM161AQ3B820 660 aa9.41□□□□□ -0.9
NEUROD4-201ENST00000242994 PLB1Q6P1J6 1458 aa9.41□□□□□ -0.9
NEUROD4-201ENST00000242994 BRD4O60885 1362 aaPredicted RBP9.4□□□□□ -0.9
NEUROD4-201ENST00000242994 PTPN23Q9H3S7 1636 aa9.4□□□□□ -0.91
NEUROD4-201ENST00000242994 E9PSI1 815 aa9.39□□□□□ -0.91
NEUROD4-201ENST00000242994 TAOK2Q9UL54 1235 aa9.39□□□□□ -0.91
NEUROD4-201ENST00000242994 PPP2R1AP30153 589 aa9.39□□□□□ -0.91
NEUROD4-201ENST00000242994 NAP1L5Q96NT1 182 aaPredicted RBP9.39□□□□□ -0.91
NEUROD4-201ENST00000242994 GGNBP2Q9H3C7 697 aa9.39□□□□□ -0.91
NEUROD4-201ENST00000242994 ABCC5O15440 1437 aa9.39□□□□□ -0.91
NEUROD4-201ENST00000242994 BCAR3O75815 825 aa9.39□□□□□ -0.91
NEUROD4-201ENST00000242994 URB2Q14146 1524 aaKnown RBP9.38□□□□□ -0.91
NEUROD4-201ENST00000242994 PMFBP1Q8TBY8 1022 aa9.38□□□□□ -0.91
NEUROD4-201ENST00000242994 TERF2IPQ9NYB0 399 aa9.38□□□□□ -0.91
NEUROD4-201ENST00000242994 HECW1Q76N89 1606 aa9.38□□□□□ -0.91
NEUROD4-201ENST00000242994 IPO8O15397 1037 aaKnown RBP9.38□□□□□ -0.91
NEUROD4-201ENST00000242994 ARHGAP5Q13017 1502 aa9.38□□□□□ -0.91
NEUROD4-201ENST00000242994 PLCB2Q00722 1185 aa9.38□□□□□ -0.91
NEUROD4-201ENST00000242994 SLC12A5Q9H2X9 1139 aa9.38□□□□□ -0.91
NEUROD4-201ENST00000242994 PNNQ9H307 717 aaKnown RBP9.38□□□□□ -0.91
NEUROD4-201ENST00000242994 ARHGEF11O15085 1522 aa9.38□□□□□ -0.91
NEUROD4-201ENST00000242994 CASC1Q6TDU7 716 aa9.37□□□□□ -0.91
NEUROD4-201ENST00000242994 CABP2Q9NPB3 220 aa9.37□□□□□ -0.91
NEUROD4-201ENST00000242994 SLC4A10Q6U841 1118 aa9.37□□□□□ -0.91
NEUROD4-201ENST00000242994 CGNL1Q0VF96 1302 aa9.37□□□□□ -0.91
NEUROD4-201ENST00000242994 MAP3K1Q13233 1512 aa9.37□□□□□ -0.91
NEUROD4-201ENST00000242994 MTHFSP49914 203 aa9.37□□□□□ -0.91
NEUROD4-201ENST00000242994 C20orf194Q5TEA3 1177 aa9.36□□□□□ -0.91
NEUROD4-201ENST00000242994 ZNF608Q9ULD9 1512 aaPredicted RBP9.36□□□□□ -0.91
NEUROD4-201ENST00000242994 IQGAP2Q13576 1575 aa9.36□□□□□ -0.91
NEUROD4-201ENST00000242994 MRC2Q9UBG0 1479 aa9.35□□□□□ -0.91
NEUROD4-201ENST00000242994 OS9Q13438 667 aaPredicted RBP9.35□□□□□ -0.91
NEUROD4-201ENST00000242994 CYB5RLQ6IPT4 315 aa9.35□□□□□ -0.91
NEUROD4-201ENST00000242994 NOL8Q76FK4 1167 aaKnown RBP9.35□□□□□ -0.91
NEUROD4-201ENST00000242994 TCP11L2Q8N4U5 519 aa9.35□□□□□ -0.91
NEUROD4-201ENST00000242994 HMOX1P09601 288 aa9.35□□□□□ -0.91
NEUROD4-201ENST00000242994 RTF1Q92541 710 aaKnown RBP9.35□□□□□ -0.91
NEUROD4-201ENST00000242994 LTV1Q96GA3 475 aaPredicted RBP9.35□□□□□ -0.91
NEUROD4-201ENST00000242994 NCOA1Q15788 1441 aa9.34□□□□□ -0.91
NEUROD4-201ENST00000242994 SYNJ2O15056 1496 aa9.34□□□□□ -0.91
NEUROD4-201ENST00000242994 PTMAP06454 111 aaKnown RBP9.34□□□□□ -0.91
NEUROD4-201ENST00000242994 THOC2Q8NI27 1593 aaKnown RBP9.34□□□□□ -0.91
NEUROD4-201ENST00000242994 ZKSCAN2Q63HK3 967 aa9.34□□□□□ -0.91
NEUROD4-201ENST00000242994 EVC2Q86UK5 1308 aa9.34□□□□□ -0.91
NEUROD4-201ENST00000242994 VGFO15240 615 aaPredicted RBP9.34□□□□□ -0.91
NEUROD4-201ENST00000242994 RIPK4P57078 832 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms