RNA–Protein interactions for RNA: ENST00000242059.9

SCRN1-201, Transcript of secernin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCRN1, Length 5,257 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-201ENST00000242059 RAPGEF4Q8WZA2 1011 aa12.17□□□□□ -0.46
SCRN1-201ENST00000242059 GOLGA6L6A8MZA4 724 aa12.16□□□□□ -0.46
SCRN1-201ENST00000242059 MPHOSPH9Q99550 1183 aa12.16□□□□□ -0.46
SCRN1-201ENST00000242059 NCAPD3P42695 1498 aa12.16□□□□□ -0.46
SCRN1-201ENST00000242059 TAOK2Q9UL54 1235 aa12.16□□□□□ -0.46
SCRN1-201ENST00000242059 CC2D2AQ9P2K1 1620 aa12.16□□□□□ -0.46
SCRN1-201ENST00000242059 AQRO60306 1485 aaKnown RBP eCLIP12.16□□□□□ -0.46
SCRN1-201ENST00000242059 MRC2Q9UBG0 1479 aa12.16□□□□□ -0.46
SCRN1-201ENST00000242059 SETD5Q9C0A6 1442 aa12.15□□□□□ -0.46
SCRN1-201ENST00000242059 NRDCO43847 1150 aa12.15□□□□□ -0.46
SCRN1-201ENST00000242059 HMMRO75330 724 aa12.15□□□□□ -0.46
SCRN1-201ENST00000242059 KANK4Q5T7N3 995 aaPredicted RBP12.15□□□□□ -0.46
SCRN1-201ENST00000242059 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.15□□□□□ -0.47
SCRN1-201ENST00000242059 TRAK1Q9UPV9 953 aa12.15□□□□□ -0.47
SCRN1-201ENST00000242059 GRIN2BQ13224 1484 aa12.15□□□□□ -0.47
SCRN1-201ENST00000242059 CCDC144AA2RUR9 1427 aa12.14□□□□□ -0.47
SCRN1-201ENST00000242059 TXNDC2Q86VQ3 553 aa12.14□□□□□ -0.47
SCRN1-201ENST00000242059 CCDC34Q96HJ3 373 aa12.14□□□□□ -0.47
SCRN1-201ENST00000242059 NEXNQ0ZGT2 675 aa12.13□□□□□ -0.47
SCRN1-201ENST00000242059 LRRFIP1Q32MZ4 808 aaKnown RBP12.13□□□□□ -0.47
SCRN1-201ENST00000242059 IFT140Q96RY7 1462 aa12.13□□□□□ -0.47
SCRN1-201ENST00000242059 GOLGA6L4A6NEF3 574 aa12.13□□□□□ -0.47
SCRN1-201ENST00000242059 FHOD3Q2V2M9 1422 aa12.12□□□□□ -0.47
SCRN1-201ENST00000242059 VPS8Q8N3P4 1428 aa12.12□□□□□ -0.47
SCRN1-201ENST00000242059 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.12□□□□□ -0.47
SCRN1-201ENST00000242059 RBM33Q96EV2 1170 aaKnown RBP12.12□□□□□ -0.47
SCRN1-201ENST00000242059 PIP4K2BP78356 416 aa12.11□□□□□ -0.47
SCRN1-201ENST00000242059 SMC4Q9NTJ3 1288 aa12.11□□□□□ -0.47
SCRN1-201ENST00000242059 DHX57Q6P158 1386 aaKnown RBP12.11□□□□□ -0.47
SCRN1-201ENST00000242059 NCBP3Q53F19 620 aaKnown RBP12.11□□□□□ -0.47
SCRN1-201ENST00000242059 WWC1Q8IX03 1113 aa12.11□□□□□ -0.47
SCRN1-201ENST00000242059 L1TD1Q5T7N2 865 aaKnown RBP12.1□□□□□ -0.47
SCRN1-201ENST00000242059 RALBP1Q15311 655 aa12.1□□□□□ -0.47
SCRN1-201ENST00000242059 NUTM2BA6NNL0 878 aaPredicted RBP12.09□□□□□ -0.47
SCRN1-201ENST00000242059 NUTM2EB1AL46 878 aaPredicted RBP12.09□□□□□ -0.47
SCRN1-201ENST00000242059 NUTM2AQ8IVF1 878 aaPredicted RBP12.09□□□□□ -0.47
SCRN1-201ENST00000242059 DDX58O95786 925 aaKnown RBP12.09□□□□□ -0.47
SCRN1-201ENST00000242059 SIN3AQ96ST3 1273 aa12.08□□□□□ -0.48
SCRN1-201ENST00000242059 NLRP2Q9NX02 1062 aa12.08□□□□□ -0.48
SCRN1-201ENST00000242059 CHAF1AQ13111 956 aaPredicted RBP12.08□□□□□ -0.48
SCRN1-201ENST00000242059 CGNL1Q0VF96 1302 aa12.08□□□□□ -0.48
SCRN1-201ENST00000242059 ERICH6BQ5W0A0 696 aa12.08□□□□□ -0.48
SCRN1-201ENST00000242059 CHMP4CQ96CF2 233 aa12.08□□□□□ -0.48
SCRN1-201ENST00000242059 TCEAL9Q9UHQ7 104 aa12.08□□□□□ -0.48
SCRN1-201ENST00000242059 VPS37DQ86XT2 251 aa12.08□□□□□ -0.48
SCRN1-201ENST00000242059 MARCH6O60337 910 aa12.07□□□□□ -0.48
SCRN1-201ENST00000242059 PPP1R1BQ9UD71 204 aaPredicted RBP12.07□□□□□ -0.48
SCRN1-201ENST00000242059 SYNJ2O15056 1496 aa12.07□□□□□ -0.48
SCRN1-201ENST00000242059 PRG4Q92954 1404 aaPredicted RBP12.07□□□□□ -0.48
SCRN1-201ENST00000242059 HTATSF1O43719 755 aaKnown RBP12.07□□□□□ -0.48
SCRN1-201ENST00000242059 BICRAQ9NZM4 1560 aa12.07□□□□□ -0.48
SCRN1-201ENST00000242059 PDE3BQ13370 1112 aa12.07□□□□□ -0.48
SCRN1-201ENST00000242059 MINK1Q8N4C8 1332 aaPredicted RBP12.06□□□□□ -0.48
SCRN1-201ENST00000242059 FGD5Q6ZNL6 1462 aa12.06□□□□□ -0.48
SCRN1-201ENST00000242059 FBXW7Q969H0 707 aa12.05□□□□□ -0.48
SCRN1-201ENST00000242059 VPS53Q5VIR6 699 aa12.05□□□□□ -0.48
SCRN1-201ENST00000242059 NOP58Q9Y2X3 529 aaKnown RBP12.05□□□□□ -0.48
SCRN1-201ENST00000242059 WDHD1O75717 1129 aaPredicted RBP12.04□□□□□ -0.48
SCRN1-201ENST00000242059 ESCO1Q5FWF5 840 aa12.04□□□□□ -0.48
SCRN1-201ENST00000242059 IRX6P78412 446 aaPredicted RBP12.04□□□□□ -0.48
SCRN1-201ENST00000242059 TOMM22Q9NS69 142 aa12.04□□□□□ -0.48
SCRN1-201ENST00000242059 KIAA2012Q0VF49 1180 aa12.04□□□□□ -0.48
SCRN1-201ENST00000242059 MIA2Q96PC5 1412 aa12.04□□□□□ -0.48
SCRN1-201ENST00000242059 CCAR1Q8IX12 1150 aaKnown RBP12.03□□□□□ -0.48
SCRN1-201ENST00000242059 PLEKHH2Q8IVE3 1493 aa12.02□□□□□ -0.49
SCRN1-201ENST00000242059 KIF3AQ9Y496 699 aa12.01□□□□□ -0.49
SCRN1-201ENST00000242059 IGF1RP08069 1367 aa12.01□□□□□ -0.49
SCRN1-201ENST00000242059 HSP90AB1P08238 724 aaKnown RBP12.01□□□□□ -0.49
SCRN1-201ENST00000242059 MYOM3Q5VTT5 1437 aa12.01□□□□□ -0.49
SCRN1-201ENST00000242059 SLC4A10Q6U841 1118 aa12.01□□□□□ -0.49
SCRN1-201ENST00000242059 SENP3-EIF4A1A0A087X0R7 540 aa12.01□□□□□ -0.49
SCRN1-201ENST00000242059 SLC52A1Q9NWF4 448 aa12□□□□□ -0.49
SCRN1-201ENST00000242059 TRIM44Q96DX7 344 aaPredicted RBP12□□□□□ -0.49
SCRN1-201ENST00000242059 NLRP6P59044 892 aa12□□□□□ -0.49
SCRN1-201ENST00000242059 CNKSR2Q8WXI2 1034 aa12□□□□□ -0.49
SCRN1-201ENST00000242059 PTMAP06454 111 aaKnown RBP11.99□□□□□ -0.49
SCRN1-201ENST00000242059 RASSF8Q8NHQ8 419 aa11.99□□□□□ -0.49
SCRN1-201ENST00000242059 SMG6Q86US8 1419 aaKnown RBP11.99□□□□□ -0.49
SCRN1-201ENST00000242059 TOM1O60784 492 aa11.99□□□□□ -0.49
SCRN1-201ENST00000242059 PRM3Q9NNZ6 103 aa11.99□□□□□ -0.49
SCRN1-201ENST00000242059 RWDD1Q9H446 243 aaPredicted RBP11.98□□□□□ -0.49
SCRN1-201ENST00000242059 STRN4Q9NRL3 753 aa11.98□□□□□ -0.49
SCRN1-201ENST00000242059 HSPA5P11021 654 aaKnown RBP11.98□□□□□ -0.49
SCRN1-201ENST00000242059 ITPRIPQ8IWB1 547 aa11.98□□□□□ -0.49
SCRN1-201ENST00000242059 PHLDB1Q86UU1 1377 aa11.98□□□□□ -0.49
SCRN1-201ENST00000242059 NLRP13Q86W25 1043 aa11.98□□□□□ -0.49
SCRN1-201ENST00000242059 AKAP17AQ02040 695 aaKnown RBP11.98□□□□□ -0.49
SCRN1-201ENST00000242059 TATP17735 454 aaPredicted RBP11.97□□□□□ -0.49
SCRN1-201ENST00000242059 APBB1O00213 710 aa11.97□□□□□ -0.49
SCRN1-201ENST00000242059 SYNE3Q6ZMZ3 975 aa11.97□□□□□ -0.49
SCRN1-201ENST00000242059 ARHGAP5Q13017 1502 aa11.97□□□□□ -0.49
SCRN1-201ENST00000242059 PRDM11Q9NQV5 511 aa11.96□□□□□ -0.49
SCRN1-201ENST00000242059 ABTB2Q8N961 1025 aa11.96□□□□□ -0.49
SCRN1-201ENST00000242059 C9orf78Q9NZ63 289 aaPredicted RBP11.96□□□□□ -0.49
SCRN1-201ENST00000242059 PLEKHO1Q53GL0 409 aaPredicted RBP11.96□□□□□ -0.5
SCRN1-201ENST00000242059 USP35Q9P2H5 1018 aa11.95□□□□□ -0.5
SCRN1-201ENST00000242059 TOM1L2Q6ZVM7 507 aa11.95□□□□□ -0.5
SCRN1-201ENST00000242059 CENPJQ9HC77 1338 aaPredicted RBP11.95□□□□□ -0.5
SCRN1-201ENST00000242059 KIF15Q9NS87 1388 aa11.94□□□□□ -0.5
SCRN1-201ENST00000242059 RGS3P49796 1198 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms