RNA–Protein interactions for RNA: ENST00000237247.10

SGIP1-201, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SGIP1, Length 3,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-201ENST00000237247 FAM135AQ9P2D6 1515 aa8.77□□□□□ -1.01
SGIP1-201ENST00000237247 DIP2CQ9Y2E4 1556 aa8.77□□□□□ -1.01
SGIP1-201ENST00000237247 PLCH2O75038 1416 aa8.76□□□□□ -1.01
SGIP1-201ENST00000237247 CCDC136Q96JN2 1154 aa8.76□□□□□ -1.01
SGIP1-201ENST00000237247 NCOA1Q15788 1441 aa8.76□□□□□ -1.01
SGIP1-201ENST00000237247 PPLO60437 1756 aa8.75□□□□□ -1.01
SGIP1-201ENST00000237247 RANGAP1P46060 587 aaPredicted RBP8.75□□□□□ -1.01
SGIP1-201ENST00000237247 RTEL1-TNFRSF6BF6WH68 1400 aa8.74□□□□□ -1.01
SGIP1-201ENST00000237247 DUOX2Q9NRD8 1548 aa8.73□□□□□ -1.01
SGIP1-201ENST00000237247 JPH4Q96JJ6 628 aa8.73□□□□□ -1.01
SGIP1-201ENST00000237247 PLA2R1Q13018 1463 aa8.73□□□□□ -1.01
SGIP1-201ENST00000237247 ANP32CO43423 234 aa8.72□□□□□ -1.01
SGIP1-201ENST00000237247 TONSLQ96HA7 1378 aa8.72□□□□□ -1.01
SGIP1-201ENST00000237247 CAMSAP1Q5T5Y3 1602 aa8.72□□□□□ -1.01
SGIP1-201ENST00000237247 NRXN1Q9ULB1 1477 aa8.72□□□□□ -1.01
SGIP1-201ENST00000237247 MADDQ8WXG6 1647 aa8.72□□□□□ -1.01
SGIP1-201ENST00000237247 MYOM1P52179 1685 aa8.72□□□□□ -1.01
SGIP1-201ENST00000237247 NEFLP07196 543 aa8.71□□□□□ -1.01
SGIP1-201ENST00000237247 TRPM2O94759 1503 aa8.7□□□□□ -1.02
SGIP1-201ENST00000237247 KCNH8Q96L42 1107 aa8.7□□□□□ -1.02
SGIP1-201ENST00000237247 CCDC141Q6ZP82 1450 aa8.7□□□□□ -1.02
SGIP1-201ENST00000237247 ERBINQ96RT1 1412 aa8.7□□□□□ -1.02
SGIP1-201ENST00000237247 CLTCL1P53675 1640 aa8.7□□□□□ -1.02
SGIP1-201ENST00000237247 DDX10Q13206 875 aaKnown RBP8.7□□□□□ -1.02
SGIP1-201ENST00000237247 SIN3AQ96ST3 1273 aa8.7□□□□□ -1.02
SGIP1-201ENST00000237247 ATP7AQ04656 1500 aa8.69□□□□□ -1.02
SGIP1-201ENST00000237247 EFCAB6Q5THR3 1501 aa8.69□□□□□ -1.02
SGIP1-201ENST00000237247 MLH3Q9UHC1 1453 aa8.69□□□□□ -1.02
SGIP1-201ENST00000237247 FKBP8Q14318 412 aa8.69□□□□□ -1.02
SGIP1-201ENST00000237247 CNTLNQ9NXG0 1405 aa8.68□□□□□ -1.02
SGIP1-201ENST00000237247 FAM50AQ14320 339 aaKnown RBP8.68□□□□□ -1.02
SGIP1-201ENST00000237247 PTPRTO14522 1441 aa8.68□□□□□ -1.02
SGIP1-201ENST00000237247 UHRF1BP1Q6BDS2 1440 aa8.68□□□□□ -1.02
SGIP1-201ENST00000237247 SYNMO15061 1565 aa8.68□□□□□ -1.02
SGIP1-201ENST00000237247 RPRD2Q5VT52 1461 aaKnown RBP8.68□□□□□ -1.02
SGIP1-201ENST00000237247 MTUS2Q5JR59 1369 aa8.68□□□□□ -1.02
SGIP1-201ENST00000237247 SPATA31E1Q6ZUB1 1445 aa8.68□□□□□ -1.02
SGIP1-201ENST00000237247 MYO5BQ9ULV0 1848 aa8.67□□□□□ -1.02
SGIP1-201ENST00000237247 AGLP35573 1532 aa8.67□□□□□ -1.02
SGIP1-201ENST00000237247 PLEKHH2Q8IVE3 1493 aa8.67□□□□□ -1.02
SGIP1-201ENST00000237247 NEO1Q92859 1461 aa8.67□□□□□ -1.02
SGIP1-201ENST00000237247 ITGAEP38570 1179 aa8.67□□□□□ -1.02
SGIP1-201ENST00000237247 PREX1Q8TCU6 1659 aa8.66□□□□□ -1.02
SGIP1-201ENST00000237247 ARHGEF40Q8TER5 1519 aa8.65□□□□□ -1.02
SGIP1-201ENST00000237247 ASXL2Q76L83 1435 aa8.65□□□□□ -1.02
SGIP1-201ENST00000237247 C11orf95C9JLR9 678 aaPredicted RBP8.65□□□□□ -1.03
SGIP1-201ENST00000237247 NRXN3Q9Y4C0 1643 aa8.65□□□□□ -1.03
SGIP1-201ENST00000237247 ADGRB3O60242 1522 aa8.64□□□□□ -1.03
SGIP1-201ENST00000237247 POGZQ7Z3K3 1410 aa8.64□□□□□ -1.03
SGIP1-201ENST00000237247 ANKRD30BQ9BXX2 1392 aa8.63□□□□□ -1.03
SGIP1-201ENST00000237247 CLTCQ00610 1675 aaKnown RBP8.63□□□□□ -1.03
SGIP1-201ENST00000237247 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.62□□□□□ -1.03
SGIP1-201ENST00000237247 KNDC1Q76NI1 1749 aa8.62□□□□□ -1.03
SGIP1-201ENST00000237247 GLIPR1L2Q4G1C9 344 aa8.62□□□□□ -1.03
SGIP1-201ENST00000237247 C9orf84Q5VXU9 1444 aa8.62□□□□□ -1.03
SGIP1-201ENST00000237247 TMEM131LA2VDJ0 1609 aa8.62□□□□□ -1.03
SGIP1-201ENST00000237247 RIMS1Q86UR5 1692 aaKnown RBP8.61□□□□□ -1.03
SGIP1-201ENST00000237247 TRAPPC8Q9Y2L5 1435 aa8.61□□□□□ -1.03
SGIP1-201ENST00000237247 IL27Q8NEV9 243 aa8.61□□□□□ -1.03
SGIP1-201ENST00000237247 ZNF142P52746 1687 aaPredicted RBP8.6□□□□□ -1.03
SGIP1-201ENST00000237247 WASHC2AQ641Q2 1341 aa8.6□□□□□ -1.03
SGIP1-201ENST00000237247 CCDC7Q96M83 1385 aa8.59□□□□□ -1.03
SGIP1-201ENST00000237247 SETBP1Q9Y6X0 1596 aa8.59□□□□□ -1.03
SGIP1-201ENST00000237247 KIF1BO60333 1816 aa8.59□□□□□ -1.03
SGIP1-201ENST00000237247 ZBED9Q6R2W3 1325 aa8.59□□□□□ -1.03
SGIP1-201ENST00000237247 USP54Q70EL1 1684 aa8.59□□□□□ -1.03
SGIP1-201ENST00000237247 ABCC3O15438 1527 aa8.58□□□□□ -1.04
SGIP1-201ENST00000237247 SPATA31D1Q6ZQQ2 1576 aa8.58□□□□□ -1.04
SGIP1-201ENST00000237247 UGGT1Q9NYU2 1555 aa8.58□□□□□ -1.04
SGIP1-201ENST00000237247 ARHGAP5Q13017 1502 aa8.58□□□□□ -1.04
SGIP1-201ENST00000237247 PPP4R2Q9NY27 417 aa8.57□□□□□ -1.04
SGIP1-201ENST00000237247 ARHGEF28Q8N1W1 1705 aaKnown RBP8.57□□□□□ -1.04
SGIP1-201ENST00000237247 ZMYND15Q9H091 742 aa8.57□□□□□ -1.04
SGIP1-201ENST00000237247 RSPH6AQ9H0K4 717 aa8.57□□□□□ -1.04
SGIP1-201ENST00000237247 ARID4BQ4LE39 1312 aaPredicted RBP8.57□□□□□ -1.04
SGIP1-201ENST00000237247 EIF4G2P78344 907 aaKnown RBP eCLIP8.57□□□□□ -1.04
SGIP1-201ENST00000237247 FGD1P98174 961 aa8.57□□□□□ -1.04
SGIP1-201ENST00000237247 CHMP7Q8WUX9 453 aaPredicted RBP8.57□□□□□ -1.04
SGIP1-201ENST00000237247 SMG6Q86US8 1419 aaKnown RBP8.56□□□□□ -1.04
SGIP1-201ENST00000237247 HSPA5P11021 654 aaKnown RBP8.56□□□□□ -1.04
SGIP1-201ENST00000237247 BCANQ96GW7 911 aa8.56□□□□□ -1.04
SGIP1-201ENST00000237247 USP32Q8NFA0 1604 aa8.56□□□□□ -1.04
SGIP1-201ENST00000237247 FANCAO15360 1455 aa8.56□□□□□ -1.04
SGIP1-201ENST00000237247 ADGRB1O14514 1584 aa8.56□□□□□ -1.04
SGIP1-201ENST00000237247 TRIM52Q96A61 297 aa8.56□□□□□ -1.04
SGIP1-201ENST00000237247 CDK11AQ9UQ88 783 aaPredicted RBP8.56□□□□□ -1.04
SGIP1-201ENST00000237247 RNF123Q5XPI4 1314 aa8.55□□□□□ -1.04
SGIP1-201ENST00000237247 ARHGAP31Q2M1Z3 1444 aa8.55□□□□□ -1.04
SGIP1-201ENST00000237247 NEXMIFQ5QGS0 1516 aa8.55□□□□□ -1.04
SGIP1-201ENST00000237247 UBR1Q8IWV7 1749 aa8.54□□□□□ -1.04
SGIP1-201ENST00000237247 MARF1Q9Y4F3 1742 aaKnown RBP8.54□□□□□ -1.04
SGIP1-201ENST00000237247 MYOM2P54296 1465 aa8.54□□□□□ -1.04
SGIP1-201ENST00000237247 P3H3Q8IVL6 736 aa8.54□□□□□ -1.04
SGIP1-201ENST00000237247 PRAG1Q86YV5 1406 aa8.54□□□□□ -1.04
SGIP1-201ENST00000237247 WASHC2CQ9Y4E1 1318 aa8.54□□□□□ -1.04
SGIP1-201ENST00000237247 ADAMTSL3P82987 1691 aa8.54□□□□□ -1.04
SGIP1-201ENST00000237247 ZNF644Q9H582 1327 aaPredicted RBP8.54□□□□□ -1.04
SGIP1-201ENST00000237247 RALGAPBQ86X10 1494 aa8.54□□□□□ -1.04
SGIP1-201ENST00000237247 COL17A1Q9UMD9 1497 aaPredicted RBP8.54□□□□□ -1.04
SGIP1-201ENST00000237247 ASXL1Q8IXJ9 1541 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms