RNA–Protein interactions for RNA: ENST00000233072.9

CPS1-201, Transcript of carbamoyl-phosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPS1, Length 5,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-201ENST00000233072 CGNL1Q0VF96 1302 aa8.97□□□□□ -0.97
CPS1-201ENST00000233072 SOX12O15370 315 aa8.97□□□□□ -0.97
CPS1-201ENST00000233072 TAOK2Q9UL54 1235 aa8.97□□□□□ -0.97
CPS1-201ENST00000233072 EVC2Q86UK5 1308 aa8.96□□□□□ -0.97
CPS1-201ENST00000233072 GOLGA6L3A6NEY3 463 aa8.96□□□□□ -0.97
CPS1-201ENST00000233072 KIF16BQ96L93 1317 aa8.96□□□□□ -0.98
CPS1-201ENST00000233072 NOC3LQ8WTT2 800 aaKnown RBP8.96□□□□□ -0.98
CPS1-201ENST00000233072 GOLGA6L1Q8N7Z2 621 aa8.95□□□□□ -0.98
CPS1-201ENST00000233072 CENPQQ7L2Z9 268 aaPredicted RBP8.95□□□□□ -0.98
CPS1-201ENST00000233072 TNNT3P45378 269 aaPredicted RBP8.95□□□□□ -0.98
CPS1-201ENST00000233072 AMPHP49418 695 aa8.95□□□□□ -0.98
CPS1-201ENST00000233072 NGDNQ8NEJ9 315 aaKnown RBP8.95□□□□□ -0.98
CPS1-201ENST00000233072 E9PSI1 815 aa8.94□□□□□ -0.98
CPS1-201ENST00000233072 VGFO15240 615 aaPredicted RBP8.94□□□□□ -0.98
CPS1-201ENST00000233072 TRIM6-TRIM34B2RNG4 842 aa8.94□□□□□ -0.98
CPS1-201ENST00000233072 DEKP35659 375 aaKnown RBP8.94□□□□□ -0.98
CPS1-201ENST00000233072 SKOR2Q2VWA4 1001 aaPredicted RBP8.94□□□□□ -0.98
CPS1-201ENST00000233072 RBM19Q9Y4C8 960 aaKnown RBP8.94□□□□□ -0.98
CPS1-201ENST00000233072 ATP6V1DQ9Y5K8 247 aa8.94□□□□□ -0.98
CPS1-201ENST00000233072 MYOM3Q5VTT5 1437 aa8.94□□□□□ -0.98
CPS1-201ENST00000233072 AAMPQ13685 434 aa8.94□□□□□ -0.98
CPS1-201ENST00000233072 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.93□□□□□ -0.98
CPS1-201ENST00000233072 IPO9Q96P70 1041 aaKnown RBP8.93□□□□□ -0.98
CPS1-201ENST00000233072 HNRNPMP52272 730 aaKnown RBP eCLIP8.93□□□□□ -0.98
CPS1-201ENST00000233072 TPM2P07951 284 aa8.93□□□□□ -0.98
CPS1-201ENST00000233072 MFAP1P55081 439 aaKnown RBP8.93□□□□□ -0.98
CPS1-201ENST00000233072 SENP3-EIF4A1A0A087X0R7 540 aa8.93□□□□□ -0.98
CPS1-201ENST00000233072 G3V3G9 751 aa8.93□□□□□ -0.98
CPS1-201ENST00000233072 DCAF8Q5TAQ9 597 aa8.93□□□□□ -0.98
CPS1-201ENST00000233072 MIA2Q96PC5 1412 aa8.93□□□□□ -0.98
CPS1-201ENST00000233072 COG3Q96JB2 828 aa8.93□□□□□ -0.98
CPS1-201ENST00000233072 C1orf141Q5JVX7 400 aa8.92□□□□□ -0.98
CPS1-201ENST00000233072 CHMP3Q9Y3E7 222 aa8.92□□□□□ -0.98
CPS1-201ENST00000233072 PTPRGP23470 1445 aa8.92□□□□□ -0.98
CPS1-201ENST00000233072 WWC1Q8IX03 1113 aa8.92□□□□□ -0.98
CPS1-201ENST00000233072 L3MBTL2Q969R5 705 aa8.92□□□□□ -0.98
CPS1-201ENST00000233072 APBB1O00213 710 aa8.92□□□□□ -0.98
CPS1-201ENST00000233072 TPM3P06753 285 aa8.92□□□□□ -0.98
CPS1-201ENST00000233072 SPRYD3Q8NCJ5 442 aa8.92□□□□□ -0.98
CPS1-201ENST00000233072 FOXD1Q16676 465 aa8.91□□□□□ -0.98
CPS1-201ENST00000233072 AMOTL1Q8IY63 956 aa8.91□□□□□ -0.98
CPS1-201ENST00000233072 FYCO1Q9BQS8 1478 aa8.91□□□□□ -0.98
CPS1-201ENST00000233072 SCAPERQ9BY12 1400 aa8.91□□□□□ -0.98
CPS1-201ENST00000233072 RASSF8Q8NHQ8 419 aa8.91□□□□□ -0.98
CPS1-201ENST00000233072 RUFY2Q8WXA3 655 aa8.91□□□□□ -0.98
CPS1-201ENST00000233072 ZKSCAN2Q63HK3 967 aa8.9□□□□□ -0.98
CPS1-201ENST00000233072 KIF21BO75037 1637 aa8.9□□□□□ -0.98
CPS1-201ENST00000233072 JPH4Q96JJ6 628 aa8.9□□□□□ -0.99
CPS1-201ENST00000233072 GAPVD1Q14C86 1478 aa8.9□□□□□ -0.99
CPS1-201ENST00000233072 RTN4Q9NQC3 1192 aaKnown RBP8.9□□□□□ -0.99
CPS1-201ENST00000233072 DHX57Q6P158 1386 aaKnown RBP8.89□□□□□ -0.99
CPS1-201ENST00000233072 USP47Q96K76 1375 aa8.89□□□□□ -0.99
CPS1-201ENST00000233072 ZBED9Q6R2W3 1325 aa8.89□□□□□ -0.99
CPS1-201ENST00000233072 CEP89Q96ST8 783 aa8.89□□□□□ -0.99
CPS1-201ENST00000233072 ZNF330Q9Y3S2 320 aaPredicted RBP8.89□□□□□ -0.99
CPS1-201ENST00000233072 CCDC9Q9Y3X0 531 aaKnown RBP8.89□□□□□ -0.99
CPS1-201ENST00000233072 NOL10Q9BSC4 688 aaKnown RBP8.89□□□□□ -0.99
CPS1-201ENST00000233072 ERICH3Q5RHP9 1530 aa8.89□□□□□ -0.99
CPS1-201ENST00000233072 FAM161AQ3B820 660 aa8.88□□□□□ -0.99
CPS1-201ENST00000233072 EFCAB5A4FU69 1503 aa8.88□□□□□ -0.99
CPS1-201ENST00000233072 PRDM2Q13029 1718 aa8.88□□□□□ -0.99
CPS1-201ENST00000233072 TPM1P09493 284 aa8.88□□□□□ -0.99
CPS1-201ENST00000233072 SYNE3Q6ZMZ3 975 aa8.88□□□□□ -0.99
CPS1-201ENST00000233072 H3BQV1 296 aa8.88□□□□□ -0.99
CPS1-201ENST00000233072 SETQ01105 290 aaPredicted RBP8.88□□□□□ -0.99
CPS1-201ENST00000233072 IFFO2Q5TF58 517 aa8.88□□□□□ -0.99
CPS1-201ENST00000233072 SLC4A10Q6U841 1118 aa8.88□□□□□ -0.99
CPS1-201ENST00000233072 CCDC47Q96A33 483 aaKnown RBP8.88□□□□□ -0.99
CPS1-201ENST00000233072 API5Q9BZZ5 524 aaKnown RBP8.88□□□□□ -0.99
CPS1-201ENST00000233072 RRBP1Q9P2E9 1410 aaKnown RBP8.88□□□□□ -0.99
CPS1-201ENST00000233072 FGD5Q6ZNL6 1462 aa8.87□□□□□ -0.99
CPS1-201ENST00000233072 AKAP17AQ02040 695 aaKnown RBP8.87□□□□□ -0.99
CPS1-201ENST00000233072 NEXNQ0ZGT2 675 aa8.87□□□□□ -0.99
CPS1-201ENST00000233072 ANO8Q9HCE9 1232 aaPredicted RBP8.87□□□□□ -0.99
CPS1-201ENST00000233072 DDX19BQ9UMR2 479 aa8.87□□□□□ -0.99
CPS1-201ENST00000233072 CCDC70Q6NSX1 233 aa8.87□□□□□ -0.99
CPS1-201ENST00000233072 CALRP27797 417 aaKnown RBP8.87□□□□□ -0.99
CPS1-201ENST00000233072 SF3A1Q15459 793 aaKnown RBP8.87□□□□□ -0.99
CPS1-201ENST00000233072 TSR1Q2NL82 804 aaKnown RBP8.87□□□□□ -0.99
CPS1-201ENST00000233072 HOOK1Q9UJC3 728 aaKnown RBP8.87□□□□□ -0.99
CPS1-201ENST00000233072 A0A0U1RQG5 324 aaPredicted RBP8.87□□□□□ -0.99
CPS1-201ENST00000233072 CCDC146Q8IYE0 955 aa8.87□□□□□ -0.99
CPS1-201ENST00000233072 PLEKHH2Q8IVE3 1493 aa8.87□□□□□ -0.99
CPS1-201ENST00000233072 MARCH6O60337 910 aa8.86□□□□□ -0.99
CPS1-201ENST00000233072 DDX58O95786 925 aaKnown RBP8.86□□□□□ -0.99
CPS1-201ENST00000233072 REC8O95072 547 aa8.86□□□□□ -0.99
CPS1-201ENST00000233072 TTC5Q8N0Z6 440 aa8.86□□□□□ -0.99
CPS1-201ENST00000233072 HSP90AB4PQ58FF6 505 aa8.86□□□□□ -0.99
CPS1-201ENST00000233072 CPLX2Q6PUV4 134 aaKnown RBP8.86□□□□□ -0.99
CPS1-201ENST00000233072 FAM184AQ8NB25 1140 aa8.86□□□□□ -0.99
CPS1-201ENST00000233072 PANK3Q9H999 370 aa8.86□□□□□ -0.99
CPS1-201ENST00000233072 EHBP1L1Q8N3D4 1523 aa8.86□□□□□ -0.99
CPS1-201ENST00000233072 RRP1P56182 461 aaKnown RBP8.86□□□□□ -0.99
CPS1-201ENST00000233072 TPD52L1Q16890 204 aaPredicted RBP8.85□□□□□ -0.99
CPS1-201ENST00000233072 SLKQ9H2G2 1235 aaPredicted RBP8.85□□□□□ -0.99
CPS1-201ENST00000233072 FGD6Q6ZV73 1430 aa8.85□□□□□ -0.99
CPS1-201ENST00000233072 CASKIN1Q8WXD9 1431 aa8.85□□□□□ -0.99
CPS1-201ENST00000233072 CNTLNQ9NXG0 1405 aa8.85□□□□□ -0.99
CPS1-201ENST00000233072 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.85□□□□□ -0.99
CPS1-201ENST00000233072 TRIM29Q14134 588 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms