RNA–Protein interactions for RNA: ENST00000231134.7

PCDHB5-201, Transcript of protocadherin beta 5, humanhuman

APPRIS P1 BASIC

Gene PCDHB5, Length 3,408 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB5-201ENST00000231134 PKD2Q13563 968 aa17.4■□□□□ 0.38
PCDHB5-201ENST00000231134 ANP32BQ92688 251 aaKnown RBP17.4■□□□□ 0.38
PCDHB5-201ENST00000231134 FGD1P98174 961 aa17.39■□□□□ 0.37
PCDHB5-201ENST00000231134 PDE4CQ08493 712 aa17.39■□□□□ 0.37
PCDHB5-201ENST00000231134 PRDM4Q9UKN5 801 aa17.39■□□□□ 0.37
PCDHB5-201ENST00000231134 ANTXR1Q9H6X2 564 aa17.38■□□□□ 0.37
PCDHB5-201ENST00000231134 BIVM-ERCC5R4GMW8 1640 aa17.38■□□□□ 0.37
PCDHB5-201ENST00000231134 WDR43Q15061 677 aaKnown RBP eCLIP17.38■□□□□ 0.37
PCDHB5-201ENST00000231134 AMER1Q5JTC6 1135 aaPredicted RBP17.38■□□□□ 0.37
PCDHB5-201ENST00000231134 CCDC146Q8IYE0 955 aa17.38■□□□□ 0.37
PCDHB5-201ENST00000231134 BCAR3O75815 825 aa17.38■□□□□ 0.37
PCDHB5-201ENST00000231134 FOXD4L1Q9NU39 408 aa17.38■□□□□ 0.37
PCDHB5-201ENST00000231134 MFAP1P55081 439 aaKnown RBP17.37■□□□□ 0.37
PCDHB5-201ENST00000231134 CASKIN1Q8WXD9 1431 aa17.37■□□□□ 0.37
PCDHB5-201ENST00000231134 ADAMTS8Q9UP79 889 aa17.36■□□□□ 0.37
PCDHB5-201ENST00000231134 COG6Q9Y2V7 657 aa17.36■□□□□ 0.37
PCDHB5-201ENST00000231134 DENND4BO75064 1496 aaPredicted RBP17.36■□□□□ 0.37
PCDHB5-201ENST00000231134 ANKRD30BQ9BXX2 1392 aa17.36■□□□□ 0.37
PCDHB5-201ENST00000231134 CHMP5Q9NZZ3 219 aa17.35■□□□□ 0.37
PCDHB5-201ENST00000231134 ROCK2O75116 1388 aaKnown RBP17.35■□□□□ 0.37
PCDHB5-201ENST00000231134 GOLGA2Q08379 1002 aa17.34■□□□□ 0.37
PCDHB5-201ENST00000231134 KDM6BO15054 1643 aa17.33■□□□□ 0.36
PCDHB5-201ENST00000231134 GAS2L3Q86XJ1 694 aa17.33■□□□□ 0.36
PCDHB5-201ENST00000231134 FYCO1Q9BQS8 1478 aa17.33■□□□□ 0.36
PCDHB5-201ENST00000231134 PANK1Q8TE04 598 aa17.32■□□□□ 0.36
PCDHB5-201ENST00000231134 MIA2Q96PC5 1412 aa17.32■□□□□ 0.36
PCDHB5-201ENST00000231134 NCLP19338 710 aaKnown RBP17.32■□□□□ 0.36
PCDHB5-201ENST00000231134 NEUROD2Q15784 382 aa17.31■□□□□ 0.36
PCDHB5-201ENST00000231134 RPRD2Q5VT52 1461 aaKnown RBP17.31■□□□□ 0.36
PCDHB5-201ENST00000231134 DDX11L8A8MPP1 907 aa17.3■□□□□ 0.36
PCDHB5-201ENST00000231134 DUSP27Q5VZP5 1158 aa17.3■□□□□ 0.36
PCDHB5-201ENST00000231134 FGD5Q6ZNL6 1462 aa17.3■□□□□ 0.36
PCDHB5-201ENST00000231134 RIPK4P57078 832 aa17.3■□□□□ 0.36
PCDHB5-201ENST00000231134 HSCBQ8IWL3 235 aa17.3■□□□□ 0.36
PCDHB5-201ENST00000231134 MAPK8IP3Q9UPT6 1336 aa17.29■□□□□ 0.36
PCDHB5-201ENST00000231134 UQCRHLA0A096LP55 91 aa17.29■□□□□ 0.36
PCDHB5-201ENST00000231134 UQCRHP07919 91 aa17.29■□□□□ 0.36
PCDHB5-201ENST00000231134 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.29■□□□□ 0.36
PCDHB5-201ENST00000231134 BBXQ8WY36 941 aaPredicted RBP17.29■□□□□ 0.36
PCDHB5-201ENST00000231134 XPCQ01831 940 aaPredicted RBP17.28■□□□□ 0.36
PCDHB5-201ENST00000231134 RAD54L2Q9Y4B4 1467 aa17.28■□□□□ 0.36
PCDHB5-201ENST00000231134 NASPP49321 788 aaPredicted RBP17.28■□□□□ 0.36
PCDHB5-201ENST00000231134 CFAP43Q8NDM7 1665 aa17.28■□□□□ 0.36
PCDHB5-201ENST00000231134 TBC1D32Q96NH3 1257 aa17.27■□□□□ 0.36
PCDHB5-201ENST00000231134 ZSCAN30Q86W11 494 aa17.27■□□□□ 0.36
PCDHB5-201ENST00000231134 TEX14Q8IWB6 1497 aa17.26■□□□□ 0.35
PCDHB5-201ENST00000231134 CLUAP1Q96AJ1 413 aa17.26■□□□□ 0.35
PCDHB5-201ENST00000231134 PANK3Q9H999 370 aa17.26■□□□□ 0.35
PCDHB5-201ENST00000231134 CENPJQ9HC77 1338 aaPredicted RBP17.26■□□□□ 0.35
PCDHB5-201ENST00000231134 BCL2L13Q9BXK5 485 aa17.25■□□□□ 0.35
PCDHB5-201ENST00000231134 BCL11BQ9C0K0 894 aaPredicted RBP17.25■□□□□ 0.35
PCDHB5-201ENST00000231134 HSP90AB1P08238 724 aaKnown RBP17.24■□□□□ 0.35
PCDHB5-201ENST00000231134 C22orf23Q9BZE7 217 aa17.24■□□□□ 0.35
PCDHB5-201ENST00000231134 OFD1O75665 1012 aa17.24■□□□□ 0.35
PCDHB5-201ENST00000231134 TNNT2P45379 298 aaPredicted RBP17.22■□□□□ 0.35
PCDHB5-201ENST00000231134 BCORL1Q5H9F3 1711 aa17.22■□□□□ 0.35
PCDHB5-201ENST00000231134 MAP7D2Q96T17 732 aa17.22■□□□□ 0.35
PCDHB5-201ENST00000231134 TDRD9Q8NDG6 1382 aaKnown RBP17.22■□□□□ 0.35
PCDHB5-201ENST00000231134 PDZRN3Q9UPQ7 1066 aa17.22■□□□□ 0.35
PCDHB5-201ENST00000231134 PLEKHH1Q9ULM0 1364 aa17.21■□□□□ 0.35
PCDHB5-201ENST00000231134 NBPF1Q3BBV0 1214 aa17.21■□□□□ 0.35
PCDHB5-201ENST00000231134 DNTTIP2Q5QJE6 756 aaKnown RBP17.21■□□□□ 0.35
PCDHB5-201ENST00000231134 GBP4Q96PP9 640 aa17.21■□□□□ 0.35
PCDHB5-201ENST00000231134 CCDC173Q0VFZ6 552 aa17.21■□□□□ 0.35
PCDHB5-201ENST00000231134 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.21■□□□□ 0.34
PCDHB5-201ENST00000231134 APAF1O14727 1248 aa17.2■□□□□ 0.34
PCDHB5-201ENST00000231134 TNPO1Q92973 898 aaKnown RBP17.2■□□□□ 0.34
PCDHB5-201ENST00000231134 SPINK5Q9NQ38 1064 aaPredicted RBP17.2■□□□□ 0.34
PCDHB5-201ENST00000231134 DDX49Q9Y6V7 483 aaKnown RBP17.19■□□□□ 0.34
PCDHB5-201ENST00000231134 ABCA5Q8WWZ7 1642 aa17.18■□□□□ 0.34
PCDHB5-201ENST00000231134 CBX1P83916 185 aa17.17■□□□□ 0.34
PCDHB5-201ENST00000231134 SMAP1Q8IYB5 467 aaPredicted RBP17.17■□□□□ 0.34
PCDHB5-201ENST00000231134 CGNL1Q0VF96 1302 aa17.16■□□□□ 0.34
PCDHB5-201ENST00000231134 MAPK8IP2Q13387 824 aaPredicted RBP17.16■□□□□ 0.34
PCDHB5-201ENST00000231134 CHMP4BQ9H444 224 aaKnown RBP17.16■□□□□ 0.34
PCDHB5-201ENST00000231134 CFDP1Q9UEE9 299 aaPredicted RBP17.16■□□□□ 0.34
PCDHB5-201ENST00000231134 PARD3Q8TEW0 1356 aa17.16■□□□□ 0.34
PCDHB5-201ENST00000231134 MPNDQ8N594 471 aa17.16■□□□□ 0.34
PCDHB5-201ENST00000231134 SLFN5Q08AF3 891 aa17.15■□□□□ 0.34
PCDHB5-201ENST00000231134 ISY1Q9ULR0 285 aaKnown RBP17.15■□□□□ 0.34
PCDHB5-201ENST00000231134 GOLGA6L22H0YM25 854 aa17.15■□□□□ 0.34
PCDHB5-201ENST00000231134 RRP7AQ9Y3A4 280 aaKnown RBP17.15■□□□□ 0.34
PCDHB5-201ENST00000231134 TSC1Q92574 1164 aa17.14■□□□□ 0.33
PCDHB5-201ENST00000231134 TNNQ9UQP3 1299 aa17.14■□□□□ 0.33
PCDHB5-201ENST00000231134 HECW1Q76N89 1606 aa17.14■□□□□ 0.33
PCDHB5-201ENST00000231134 NUP155O75694 1391 aa17.13■□□□□ 0.33
PCDHB5-201ENST00000231134 IGSF3O75054 1194 aa17.13■□□□□ 0.33
PCDHB5-201ENST00000231134 PTMAP06454 111 aaKnown RBP17.13■□□□□ 0.33
PCDHB5-201ENST00000231134 KNSTRNQ9Y448 316 aa17.13■□□□□ 0.33
PCDHB5-201ENST00000231134 PCDHB15Q9Y5E8 787 aa17.13■□□□□ 0.33
PCDHB5-201ENST00000231134 PER1O15534 1290 aaPredicted RBP17.12■□□□□ 0.33
PCDHB5-201ENST00000231134 JARID2Q92833 1246 aaPredicted RBP17.12■□□□□ 0.33
PCDHB5-201ENST00000231134 VGLL3A8MV65 326 aa17.12■□□□□ 0.33
PCDHB5-201ENST00000231134 PMFBP1Q8TBY8 1022 aa17.11■□□□□ 0.33
PCDHB5-201ENST00000231134 FAM177BA6PVY3 158 aa17.11■□□□□ 0.33
PCDHB5-201ENST00000231134 CAVIN1Q6NZI2 390 aaKnown RBP17.11■□□□□ 0.33
PCDHB5-201ENST00000231134 EIF3AQ14152 1382 aaKnown RBP17.1■□□□□ 0.33
PCDHB5-201ENST00000231134 SNAPC4Q5SXM2 1469 aa17.1■□□□□ 0.33
PCDHB5-201ENST00000231134 SKOR2Q2VWA4 1001 aaPredicted RBP17.1■□□□□ 0.33
PCDHB5-201ENST00000231134 CDK13Q14004 1512 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms