RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 ANKRD30BQ9BXX2 1392 aa18.5■□□□□ 0.55
PRDM4-201ENST00000228437 PLEKHD1A6NEE1 506 aa18.49■□□□□ 0.55
PRDM4-201ENST00000228437 HNRNPMP52272 730 aaKnown RBP eCLIP18.49■□□□□ 0.55
PRDM4-201ENST00000228437 CADPSQ9ULU8 1353 aa18.49■□□□□ 0.55
PRDM4-201ENST00000228437 ZMYND15Q9H091 742 aa18.48■□□□□ 0.55
PRDM4-201ENST00000228437 CENPJQ9HC77 1338 aaPredicted RBP18.48■□□□□ 0.55
PRDM4-201ENST00000228437 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.47■□□□□ 0.555e-6■■■■■ 46.2
PRDM4-201ENST00000228437 C8orf34Q49A92 452 aa18.47■□□□□ 0.55
PRDM4-201ENST00000228437 MSNP26038 577 aaKnown RBP18.46■□□□□ 0.55
PRDM4-201ENST00000228437 DHX29Q7Z478 1369 aaKnown RBP18.45■□□□□ 0.54
PRDM4-201ENST00000228437 TRAK2O60296 914 aa18.45■□□□□ 0.54
PRDM4-201ENST00000228437 SEC24BO95487 1268 aa18.45■□□□□ 0.54
PRDM4-201ENST00000228437 DNTTIP2Q5QJE6 756 aaKnown RBP18.45■□□□□ 0.54
PRDM4-201ENST00000228437 GOLGA6L22H0YM25 854 aa18.44■□□□□ 0.54
PRDM4-201ENST00000228437 RBM10P98175 930 aaKnown RBP18.43■□□□□ 0.54
PRDM4-201ENST00000228437 CHMP7Q8WUX9 453 aaPredicted RBP18.43■□□□□ 0.54
PRDM4-201ENST00000228437 FAM13BQ9NYF5 915 aa18.42■□□□□ 0.54
PRDM4-201ENST00000228437 PTMAP06454 111 aaKnown RBP18.41■□□□□ 0.54
PRDM4-201ENST00000228437 IGHDP01880 384 aa18.41■□□□□ 0.54
PRDM4-201ENST00000228437 RWDD1Q9H446 243 aaPredicted RBP18.41■□□□□ 0.54
PRDM4-201ENST00000228437 ITPRIPQ8IWB1 547 aa18.4■□□□□ 0.54
PRDM4-201ENST00000228437 MAPK8IP3Q9UPT6 1336 aa18.4■□□□□ 0.54
PRDM4-201ENST00000228437 ANKRD30AQ9BXX3 1397 aa18.4■□□□□ 0.54
PRDM4-201ENST00000228437 U2SURPO15042 1029 aaKnown RBP18.39■□□□□ 0.53
PRDM4-201ENST00000228437 XRCC6P12956 609 aaKnown RBP eCLIP18.39■□□□□ 0.53
PRDM4-201ENST00000228437 PMFBP1Q8TBY8 1022 aa18.38■□□□□ 0.53
PRDM4-201ENST00000228437 FOXD4L5Q5VV16 416 aaPredicted RBP18.38■□□□□ 0.53
PRDM4-201ENST00000228437 FOXD4L4Q8WXT5 416 aaPredicted RBP18.38■□□□□ 0.53
PRDM4-201ENST00000228437 PDZRN3Q9UPQ7 1066 aa18.37■□□□□ 0.53
PRDM4-201ENST00000228437 MCM4P33991 863 aa18.37■□□□□ 0.53
PRDM4-201ENST00000228437 CHMP5Q9NZZ3 219 aa18.37■□□□□ 0.53
PRDM4-201ENST00000228437 PPP2R1AP30153 589 aa18.37■□□□□ 0.53
PRDM4-201ENST00000228437 PLCB2Q00722 1185 aa18.36■□□□□ 0.53
PRDM4-201ENST00000228437 AMER1Q5JTC6 1135 aaPredicted RBP18.36■□□□□ 0.53
PRDM4-201ENST00000228437 CGNL1Q0VF96 1302 aa18.36■□□□□ 0.53
PRDM4-201ENST00000228437 C22orf23Q9BZE7 217 aa18.36■□□□□ 0.53
PRDM4-201ENST00000228437 RPRD2Q5VT52 1461 aaKnown RBP18.35■□□□□ 0.53
PRDM4-201ENST00000228437 A0A0U1RQG5 324 aaPredicted RBP18.35■□□□□ 0.53
PRDM4-201ENST00000228437 DUSP27Q5VZP5 1158 aa18.35■□□□□ 0.53
PRDM4-201ENST00000228437 GBP4Q96PP9 640 aa18.35■□□□□ 0.53
PRDM4-201ENST00000228437 TBC1D2Q9BYX2 928 aa18.35■□□□□ 0.53
PRDM4-201ENST00000228437 APBB1O00213 710 aa18.34■□□□□ 0.53
PRDM4-201ENST00000228437 CDCA8Q53HL2 280 aa18.34■□□□□ 0.53
PRDM4-201ENST00000228437 MORC1Q86VD1 984 aa18.34■□□□□ 0.53
PRDM4-201ENST00000228437 E9PSI1 815 aa18.34■□□□□ 0.53
PRDM4-201ENST00000228437 ESPNB1AK53 854 aa18.34■□□□□ 0.53
PRDM4-201ENST00000228437 MRE11P49959 708 aa18.33■□□□□ 0.53
PRDM4-201ENST00000228437 MIA2Q96PC5 1412 aa18.33■□□□□ 0.52
PRDM4-201ENST00000228437 DDX49Q9Y6V7 483 aaKnown RBP18.33■□□□□ 0.52
PRDM4-201ENST00000228437 ERCC6Q03468 1493 aa18.32■□□□□ 0.52
PRDM4-201ENST00000228437 BICRAQ9NZM4 1560 aa18.32■□□□□ 0.52
PRDM4-201ENST00000228437 BIVM-ERCC5R4GMW8 1640 aa18.32■□□□□ 0.52
PRDM4-201ENST00000228437 U2AF1L5P0DN76 240 aaPredicted RBP18.32■□□□□ 0.52
PRDM4-201ENST00000228437 U2AF1Q01081 240 aaKnown RBP eCLIP18.32■□□□□ 0.52
PRDM4-201ENST00000228437 GRPEL1Q9HAV7 217 aa18.32■□□□□ 0.52
PRDM4-201ENST00000228437 SMC4Q9NTJ3 1288 aa18.32■□□□□ 0.52
PRDM4-201ENST00000228437 FANCD2Q9BXW9 1451 aa18.31■□□□□ 0.52
PRDM4-201ENST00000228437 DDX11L8A8MPP1 907 aa18.3■□□□□ 0.52
PRDM4-201ENST00000228437 R3HCC1Q9Y3T6 440 aaKnown RBP18.3■□□□□ 0.52
PRDM4-201ENST00000228437 SAFB2Q14151 953 aaKnown RBP eCLIP18.3■□□□□ 0.52
PRDM4-201ENST00000228437 CDK13Q14004 1512 aaKnown RBP18.29■□□□□ 0.52
PRDM4-201ENST00000228437 FOXD4L6Q3SYB3 417 aaPredicted RBP18.29■□□□□ 0.52
PRDM4-201ENST00000228437 FOXD4L3Q6VB84 417 aaPredicted RBP18.29■□□□□ 0.52
PRDM4-201ENST00000228437 SLC24A1O60721 1099 aa18.28■□□□□ 0.52
PRDM4-201ENST00000228437 LNPKQ9C0E8 428 aa18.28■□□□□ 0.52
PRDM4-201ENST00000228437 SLFN5Q08AF3 891 aa18.28■□□□□ 0.52
PRDM4-201ENST00000228437 KIAA1107Q9UPP5 1409 aa18.28■□□□□ 0.52
PRDM4-201ENST00000228437 MPNDQ8N594 471 aa18.27■□□□□ 0.52
PRDM4-201ENST00000228437 TNNQ9UQP3 1299 aa18.27■□□□□ 0.52
PRDM4-201ENST00000228437 KIAA1211Q6ZU35 1233 aa18.27■□□□□ 0.51
PRDM4-201ENST00000228437 CFAP53Q96M91 514 aa18.27■□□□□ 0.51
PRDM4-201ENST00000228437 SPINK5Q9NQ38 1064 aaPredicted RBP18.27■□□□□ 0.51
PRDM4-201ENST00000228437 DAPK1P53355 1430 aa18.27■□□□□ 0.51
PRDM4-201ENST00000228437 ANKRD50Q9ULJ7 1429 aa18.27■□□□□ 0.51
PRDM4-201ENST00000228437 CCDC144AA2RUR9 1427 aa18.26■□□□□ 0.51
PRDM4-201ENST00000228437 RRP9O43818 475 aaKnown RBP18.26■□□□□ 0.51
PRDM4-201ENST00000228437 PDS5BQ9NTI5 1447 aa18.24■□□□□ 0.51
PRDM4-201ENST00000228437 NOL8Q76FK4 1167 aaKnown RBP18.24■□□□□ 0.51
PRDM4-201ENST00000228437 KDM2BQ8NHM5 1336 aa18.23■□□□□ 0.51
PRDM4-201ENST00000228437 LRPPRCP42704 1394 aaKnown RBP18.23■□□□□ 0.51
PRDM4-201ENST00000228437 CALD1Q05682 793 aaKnown RBP18.23■□□□□ 0.51
PRDM4-201ENST00000228437 NCAPD3P42695 1498 aa18.22■□□□□ 0.51
PRDM4-201ENST00000228437 ELL2O00472 640 aaPredicted RBP18.22■□□□□ 0.51
PRDM4-201ENST00000228437 ABCC5O15440 1437 aa18.22■□□□□ 0.51
PRDM4-201ENST00000228437 PLEKHH1Q9ULM0 1364 aa18.22■□□□□ 0.51
PRDM4-201ENST00000228437 EHBP1L1Q8N3D4 1523 aa18.22■□□□□ 0.51
PRDM4-201ENST00000228437 SUPT6HQ7KZ85 1726 aaKnown RBP18.21■□□□□ 0.51
PRDM4-201ENST00000228437 NASPP49321 788 aaPredicted RBP18.21■□□□□ 0.51
PRDM4-201ENST00000228437 SPATA31E1Q6ZUB1 1445 aa18.21■□□□□ 0.51
PRDM4-201ENST00000228437 EFCAB5A4FU69 1503 aa18.21■□□□□ 0.51
PRDM4-201ENST00000228437 ANKRD45Q5TZF3 282 aa18.21■□□□□ 0.51
PRDM4-201ENST00000228437 UNC13AQ9UPW8 1703 aa18.19■□□□□ 0.5
PRDM4-201ENST00000228437 CLCN1P35523 988 aa18.19■□□□□ 0.5
PRDM4-201ENST00000228437 NESP48681 1621 aa18.19■□□□□ 0.5
PRDM4-201ENST00000228437 RNF214Q8ND24 703 aa18.19■□□□□ 0.5
PRDM4-201ENST00000228437 PEG3Q9GZU2 1588 aa18.19■□□□□ 0.5
PRDM4-201ENST00000228437 ZKSCAN2Q63HK3 967 aa18.18■□□□□ 0.5
PRDM4-201ENST00000228437 PCDHB15Q9Y5E8 787 aa18.18■□□□□ 0.5
PRDM4-201ENST00000228437 MCTP1Q6DN14 999 aa18.18■□□□□ 0.5
PRDM4-201ENST00000228437 TCP11L2Q8N4U5 519 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms