RNA–Protein interactions for RNA: ENST00000227524.8

PRPF19-201, Transcript of pre-mRNA processing factor 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF19, Length 2,157 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-201ENST00000227524 KIF15Q9NS87 1388 aa23.86■■□□□ 1.41
PRPF19-201ENST00000227524 ARAP3Q8WWN8 1544 aa23.85■■□□□ 1.41
PRPF19-201ENST00000227524 ASXL2Q76L83 1435 aa23.85■■□□□ 1.41
PRPF19-201ENST00000227524 ABCC1P33527 1531 aa23.84■■□□□ 1.41
PRPF19-201ENST00000227524 DHX29Q7Z478 1369 aaKnown RBP23.84■■□□□ 1.41
PRPF19-201ENST00000227524 BCL11AQ9H165 835 aa23.84■■□□□ 1.41
PRPF19-201ENST00000227524 ABCA9Q8IUA7 1624 aa23.84■■□□□ 1.41
PRPF19-201ENST00000227524 B4GALNT3Q6L9W6 998 aa23.83■■□□□ 1.41
PRPF19-201ENST00000227524 EFCAB2Q5VUJ9 269 aa23.81■■□□□ 1.4
PRPF19-201ENST00000227524 KDM5CP41229 1560 aa23.81■■□□□ 1.4
PRPF19-201ENST00000227524 SMG6Q86US8 1419 aaKnown RBP23.8■■□□□ 1.4
PRPF19-201ENST00000227524 ERICH6Q7L0X2 663 aa23.8■■□□□ 1.4
PRPF19-201ENST00000227524 USP47Q96K76 1375 aa23.79■■□□□ 1.4
PRPF19-201ENST00000227524 PLXNC1O60486 1568 aa23.78■■□□□ 1.4
PRPF19-201ENST00000227524 KDM5DQ9BY66 1539 aa23.78■■□□□ 1.4
PRPF19-201ENST00000227524 TRAPPC8Q9Y2L5 1435 aa23.77■■□□□ 1.39
PRPF19-201ENST00000227524 NUP155O75694 1391 aa23.72■■□□□ 1.39
PRPF19-201ENST00000227524 FANCAO15360 1455 aa23.71■■□□□ 1.39
PRPF19-201ENST00000227524 ARID4BQ4LE39 1312 aaPredicted RBP23.71■■□□□ 1.39
PRPF19-201ENST00000227524 NUDCQ9Y266 331 aa23.71■■□□□ 1.39
PRPF19-201ENST00000227524 PKD2Q13563 968 aa23.69■■□□□ 1.38
PRPF19-201ENST00000227524 RALGAPBQ86X10 1494 aa23.69■■□□□ 1.38
PRPF19-201ENST00000227524 UHRF1BP1Q6BDS2 1440 aa23.69■■□□□ 1.38
PRPF19-201ENST00000227524 NPM1P06748 294 aaKnown RBP eCLIP23.69■■□□□ 1.38
PRPF19-201ENST00000227524 ZNF326Q5BKZ1 582 aaKnown RBP23.68■■□□□ 1.38
PRPF19-201ENST00000227524 RNF123Q5XPI4 1314 aa23.68■■□□□ 1.38
PRPF19-201ENST00000227524 POLR3GLQ9BT43 218 aa23.67■■□□□ 1.38
PRPF19-201ENST00000227524 UNC13BO14795 1591 aa23.67■■□□□ 1.38
PRPF19-201ENST00000227524 DUOX2Q9NRD8 1548 aa23.66■■□□□ 1.38
PRPF19-201ENST00000227524 CYB5RLQ6IPT4 315 aa23.65■■□□□ 1.38
PRPF19-201ENST00000227524 ZFYVE16Q7Z3T8 1539 aa23.65■■□□□ 1.38
PRPF19-201ENST00000227524 ROCK2O75116 1388 aaKnown RBP23.65■■□□□ 1.38
PRPF19-201ENST00000227524 CNGB1Q14028 1251 aaPredicted RBP23.65■■□□□ 1.38
PRPF19-201ENST00000227524 AFAP1Q8N556 730 aa23.65■■□□□ 1.38
PRPF19-201ENST00000227524 FAM135AQ9P2D6 1515 aa23.64■■□□□ 1.38
PRPF19-201ENST00000227524 RTEL1-TNFRSF6BF6WH68 1400 aa23.62■■□□□ 1.37
PRPF19-201ENST00000227524 ADGRL1O94910 1474 aa23.62■■□□□ 1.37
PRPF19-201ENST00000227524 ERBINQ96RT1 1412 aa23.61■■□□□ 1.37
PRPF19-201ENST00000227524 PNISRQ8TF01 805 aaKnown RBP23.6■■□□□ 1.37
PRPF19-201ENST00000227524 E9PCH4 1651 aa23.6■■□□□ 1.37
PRPF19-201ENST00000227524 INO80Q9ULG1 1556 aaPredicted RBP23.6■■□□□ 1.37
PRPF19-201ENST00000227524 MAGI2Q86UL8 1455 aa23.6■■□□□ 1.37
PRPF19-201ENST00000227524 SPAG9O60271 1321 aaKnown RBP23.6■■□□□ 1.37
PRPF19-201ENST00000227524 SCAPERQ9BY12 1400 aa23.59■■□□□ 1.37
PRPF19-201ENST00000227524 IQGAP3Q86VI3 1631 aa23.58■■□□□ 1.36
PRPF19-201ENST00000227524 CD109Q6YHK3 1445 aa23.56■■□□□ 1.36
PRPF19-201ENST00000227524 ATP7AQ04656 1500 aa23.56■■□□□ 1.36
PRPF19-201ENST00000227524 CCDC136Q96JN2 1154 aa23.55■■□□□ 1.36
PRPF19-201ENST00000227524 CARD11Q9BXL7 1154 aa23.55■■□□□ 1.36
PRPF19-201ENST00000227524 TMC1Q8TDI8 760 aa23.55■■□□□ 1.36
PRPF19-201ENST00000227524 MYT1LQ9UL68 1186 aa23.55■■□□□ 1.36
PRPF19-201ENST00000227524 LRPPRCP42704 1394 aaKnown RBP23.54■■□□□ 1.36
PRPF19-201ENST00000227524 NOP58Q9Y2X3 529 aaKnown RBP23.52■■□□□ 1.36
PRPF19-201ENST00000227524 BRD4O60885 1362 aaPredicted RBP23.51■■□□□ 1.35
PRPF19-201ENST00000227524 KTN1Q86UP2 1357 aaKnown RBP23.51■■□□□ 1.35
PRPF19-201ENST00000227524 CFAP74Q9C0B2 1584 aa23.5■■□□□ 1.35
PRPF19-201ENST00000227524 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.5■■□□□ 1.35
PRPF19-201ENST00000227524 MYBBP1AQ9BQG0 1328 aaKnown RBP23.49■■□□□ 1.35
PRPF19-201ENST00000227524 KIDINS220Q9ULH0 1771 aa23.49■■□□□ 1.35
PRPF19-201ENST00000227524 SENP3-EIF4A1A0A087X0R7 540 aa23.48■■□□□ 1.35
PRPF19-201ENST00000227524 PLA2R1Q13018 1463 aa23.48■■□□□ 1.35
PRPF19-201ENST00000227524 ST20-MTHFSA0A0A6YYL1 179 aa23.48■■□□□ 1.35
PRPF19-201ENST00000227524 DEPDC5O75140 1603 aa23.47■■□□□ 1.35
PRPF19-201ENST00000227524 ZNF518AQ6AHZ1 1483 aa23.46■■□□□ 1.35
PRPF19-201ENST00000227524 RALBP1Q15311 655 aa23.46■■□□□ 1.35
PRPF19-201ENST00000227524 KDM2AQ9Y2K7 1162 aa23.45■■□□□ 1.34
PRPF19-201ENST00000227524 POGZQ7Z3K3 1410 aa23.44■■□□□ 1.34
PRPF19-201ENST00000227524 TRPM1Q7Z4N2 1603 aa23.44■■□□□ 1.34
PRPF19-201ENST00000227524 MAP3K4Q9Y6R4 1608 aa23.43■■□□□ 1.34
PRPF19-201ENST00000227524 PAK3O75914 559 aaPredicted RBP23.43■■□□□ 1.34
PRPF19-201ENST00000227524 DCAF11Q8TEB1 546 aa23.42■■□□□ 1.34
PRPF19-201ENST00000227524 NEO1Q92859 1461 aa23.41■■□□□ 1.34
PRPF19-201ENST00000227524 EIF2AK4Q9P2K8 1649 aaKnown RBP23.4■■□□□ 1.34
PRPF19-201ENST00000227524 ATP10AO60312 1499 aa23.4■■□□□ 1.34
PRPF19-201ENST00000227524 GLI2P10070 1586 aa23.4■■□□□ 1.34
PRPF19-201ENST00000227524 ANP32AP39687 249 aaKnown RBP23.39■■□□□ 1.33
PRPF19-201ENST00000227524 MROH1Q8NDA8 1641 aa23.39■■□□□ 1.33
PRPF19-201ENST00000227524 VWDEQ8N2E2 1590 aa23.39■■□□□ 1.33
PRPF19-201ENST00000227524 RRP1P56182 461 aaKnown RBP23.38■■□□□ 1.33
PRPF19-201ENST00000227524 CCDC144AA2RUR9 1427 aa23.37■■□□□ 1.33
PRPF19-201ENST00000227524 DEKP35659 375 aaKnown RBP23.37■■□□□ 1.33
PRPF19-201ENST00000227524 IPO9Q96P70 1041 aaKnown RBP23.37■■□□□ 1.33
PRPF19-201ENST00000227524 MLH3Q9UHC1 1453 aa23.36■■□□□ 1.33
PRPF19-201ENST00000227524 PARD3Q8TEW0 1356 aa23.36■■□□□ 1.33
PRPF19-201ENST00000227524 PRAG1Q86YV5 1406 aa23.36■■□□□ 1.33
PRPF19-201ENST00000227524 PRDM15P57071 1507 aaPredicted RBP23.35■■□□□ 1.33
PRPF19-201ENST00000227524 HECW2Q9P2P5 1572 aa23.35■■□□□ 1.33
PRPF19-201ENST00000227524 DIP2BQ9P265 1576 aa23.34■■□□□ 1.33
PRPF19-201ENST00000227524 FRMPD1Q5SYB0 1578 aa23.33■■□□□ 1.33
PRPF19-201ENST00000227524 NLRP13Q86W25 1043 aa23.33■■□□□ 1.33
PRPF19-201ENST00000227524 LAMC1P11047 1609 aa23.33■■□□□ 1.33
PRPF19-201ENST00000227524 TET3O43151 1660 aa23.32■■□□□ 1.32
PRPF19-201ENST00000227524 KIF3BO15066 747 aa23.32■■□□□ 1.32
PRPF19-201ENST00000227524 NBR1Q14596 966 aa23.31■■□□□ 1.32
PRPF19-201ENST00000227524 RCAN3Q9UKA8 241 aa23.31■■□□□ 1.32
PRPF19-201ENST00000227524 A2MP01023 1474 aa23.31■■□□□ 1.32
PRPF19-201ENST00000227524 ABCA6Q8N139 1617 aa23.31■■□□□ 1.32
PRPF19-201ENST00000227524 RICTORQ6R327 1708 aa23.3■■□□□ 1.32
PRPF19-201ENST00000227524 EXOC6Q8TAG9 804 aa23.3■■□□□ 1.32
PRPF19-201ENST00000227524 RAPGEF3O95398 923 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms