RNA–Protein interactions for RNA: ENST00000227474.7

PUS3-201, Transcript of pseudouridylate synthase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUS3, Length 1,843 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUS3-201ENST00000227474 CAMSAP2Q08AD1 1489 aa12.08□□□□□ -0.48
PUS3-201ENST00000227474 ZNF644Q9H582 1327 aaPredicted RBP12.07□□□□□ -0.48
PUS3-201ENST00000227474 ZNF592Q92610 1267 aa12.07□□□□□ -0.48
PUS3-201ENST00000227474 ABCC10Q5T3U5 1492 aa12.07□□□□□ -0.48
PUS3-201ENST00000227474 ITSN2Q9NZM3 1697 aa12.07□□□□□ -0.48
PUS3-201ENST00000227474 ADGRL2O95490 1459 aa12.07□□□□□ -0.48
PUS3-201ENST00000227474 ZMYND15Q9H091 742 aa12.07□□□□□ -0.48
PUS3-201ENST00000227474 KIF14Q15058 1648 aa12.06□□□□□ -0.48
PUS3-201ENST00000227474 PKD2Q13563 968 aa12.06□□□□□ -0.48
PUS3-201ENST00000227474 RGS22Q8NE09 1264 aa12.06□□□□□ -0.48
PUS3-201ENST00000227474 MPHOSPH9Q99550 1183 aa12.06□□□□□ -0.48
PUS3-201ENST00000227474 A0A0U1RQG5 324 aaPredicted RBP12.05□□□□□ -0.48
PUS3-201ENST00000227474 YTHDC1Q96MU7 727 aaKnown RBP12.05□□□□□ -0.48
PUS3-201ENST00000227474 CFDP1Q9UEE9 299 aaPredicted RBP12.05□□□□□ -0.48
PUS3-201ENST00000227474 NCOA1Q15788 1441 aa12.04□□□□□ -0.48
PUS3-201ENST00000227474 RAD21O60216 631 aa12.04□□□□□ -0.48
PUS3-201ENST00000227474 KCTD17Q8N5Z5 321 aa12.04□□□□□ -0.48
PUS3-201ENST00000227474 NAP1L5Q96NT1 182 aaPredicted RBP12.04□□□□□ -0.48
PUS3-201ENST00000227474 PTPRGP23470 1445 aa12.03□□□□□ -0.48
PUS3-201ENST00000227474 PLEKHD1A6NEE1 506 aa12.03□□□□□ -0.48
PUS3-201ENST00000227474 SHROOM2Q13796 1616 aa12.03□□□□□ -0.48
PUS3-201ENST00000227474 ANKRD30BQ9BXX2 1392 aa12.02□□□□□ -0.48
PUS3-201ENST00000227474 TRIM52Q96A61 297 aa12.02□□□□□ -0.48
PUS3-201ENST00000227474 TMED8Q6PL24 325 aaPredicted RBP12.02□□□□□ -0.49
PUS3-201ENST00000227474 SHANK2Q9UPX8 1470 aa12.01□□□□□ -0.49
PUS3-201ENST00000227474 CROCC2H7BZ55 1655 aa12.01□□□□□ -0.49
PUS3-201ENST00000227474 ADGBQ8N7X0 1667 aa12□□□□□ -0.49
PUS3-201ENST00000227474 PPP4R3CPQ6ZMV5 832 aa12□□□□□ -0.49
PUS3-201ENST00000227474 MTMR7Q9Y216 660 aa12□□□□□ -0.49
PUS3-201ENST00000227474 PZPP20742 1482 aa11.99□□□□□ -0.49
PUS3-201ENST00000227474 RPRD2Q5VT52 1461 aaKnown RBP11.99□□□□□ -0.49
PUS3-201ENST00000227474 CLSTN1O94985 981 aa11.98□□□□□ -0.49
PUS3-201ENST00000227474 CHD1O14646 1710 aa11.98□□□□□ -0.49
PUS3-201ENST00000227474 ANKRD30AQ9BXX3 1397 aa11.98□□□□□ -0.49
PUS3-201ENST00000227474 CDC42BPAQ5VT25 1732 aa11.97□□□□□ -0.49
PUS3-201ENST00000227474 DDX10Q13206 875 aaKnown RBP11.97□□□□□ -0.49
PUS3-201ENST00000227474 CERS3Q8IU89 383 aa11.97□□□□□ -0.49
PUS3-201ENST00000227474 CWC22Q9HCG8 908 aaKnown RBP11.97□□□□□ -0.49
PUS3-201ENST00000227474 ARHGEF5Q12774 1597 aa11.96□□□□□ -0.49
PUS3-201ENST00000227474 RBM25P49756 843 aaKnown RBP11.96□□□□□ -0.49
PUS3-201ENST00000227474 TEX14Q8IWB6 1497 aa11.96□□□□□ -0.5
PUS3-201ENST00000227474 C1QBPQ07021 282 aaKnown RBP11.95□□□□□ -0.5
PUS3-201ENST00000227474 FAM177A1Q8N128 213 aaPredicted RBP11.95□□□□□ -0.5
PUS3-201ENST00000227474 L3MBTL2Q969R5 705 aa11.95□□□□□ -0.5
PUS3-201ENST00000227474 C9orf84Q5VXU9 1444 aa11.95□□□□□ -0.5
PUS3-201ENST00000227474 MBD5Q9P267 1494 aa11.95□□□□□ -0.5
PUS3-201ENST00000227474 FOXD4L5Q5VV16 416 aaPredicted RBP11.94□□□□□ -0.5
PUS3-201ENST00000227474 FOXD4L4Q8WXT5 416 aaPredicted RBP11.94□□□□□ -0.5
PUS3-201ENST00000227474 PSMD1Q99460 953 aa11.94□□□□□ -0.5
PUS3-201ENST00000227474 ZNF777Q9ULD5 760 aaPredicted RBP11.93□□□□□ -0.5
PUS3-201ENST00000227474 CLASP1Q7Z460 1538 aa11.93□□□□□ -0.5
PUS3-201ENST00000227474 ABCC2Q92887 1545 aa11.93□□□□□ -0.5
PUS3-201ENST00000227474 KDM5DQ9BY66 1539 aa11.93□□□□□ -0.5
PUS3-201ENST00000227474 ANKRD50Q9ULJ7 1429 aa11.93□□□□□ -0.5
PUS3-201ENST00000227474 KIAA1107Q9UPP5 1409 aa11.93□□□□□ -0.5
PUS3-201ENST00000227474 CCER2I3L3R5 266 aa11.93□□□□□ -0.5
PUS3-201ENST00000227474 HIRIP3Q9BW71 556 aaPredicted RBP11.93□□□□□ -0.5
PUS3-201ENST00000227474 SPRYD3Q8NCJ5 442 aa11.92□□□□□ -0.5
PUS3-201ENST00000227474 PREX2Q70Z35 1606 aa11.91□□□□□ -0.5
PUS3-201ENST00000227474 ERCC6L2Q5T890 1561 aa11.91□□□□□ -0.5
PUS3-201ENST00000227474 SAMD9LQ8IVG5 1584 aa11.9□□□□□ -0.5
PUS3-201ENST00000227474 HSPA5P11021 654 aaKnown RBP11.9□□□□□ -0.5
PUS3-201ENST00000227474 UHRF1BP1LA0JNW5 1464 aa11.9□□□□□ -0.5
PUS3-201ENST00000227474 CCDC141Q6ZP82 1450 aa11.89□□□□□ -0.51
PUS3-201ENST00000227474 KCNH8Q96L42 1107 aa11.89□□□□□ -0.51
PUS3-201ENST00000227474 ANP32EQ9BTT0 268 aa11.89□□□□□ -0.51
PUS3-201ENST00000227474 TSPY4P0CV99 314 aa11.88□□□□□ -0.51
PUS3-201ENST00000227474 TSPY10P0CW01 314 aa11.88□□□□□ -0.51
PUS3-201ENST00000227474 EIF4G2P78344 907 aaKnown RBP eCLIP11.88□□□□□ -0.51
PUS3-201ENST00000227474 ANP32CO43423 234 aa11.88□□□□□ -0.51
PUS3-201ENST00000227474 NBPF8Q3BBV2 869 aa11.88□□□□□ -0.51
PUS3-201ENST00000227474 CC2D2BQ6DHV5 1058 aa11.88□□□□□ -0.51
PUS3-201ENST00000227474 USP35Q9P2H5 1018 aa11.88□□□□□ -0.51
PUS3-201ENST00000227474 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.87□□□□□ -0.51
PUS3-201ENST00000227474 CDC42BPBQ9Y5S2 1711 aa11.87□□□□□ -0.51
PUS3-201ENST00000227474 MAST1Q9Y2H9 1570 aa11.87□□□□□ -0.51
PUS3-201ENST00000227474 SPATA31E1Q6ZUB1 1445 aa11.87□□□□□ -0.51
PUS3-201ENST00000227474 KIF15Q9NS87 1388 aa11.87□□□□□ -0.51
PUS3-201ENST00000227474 WASHC2AQ641Q2 1341 aa11.87□□□□□ -0.51
PUS3-201ENST00000227474 HNRNPMP52272 730 aaKnown RBP eCLIP11.86□□□□□ -0.51
PUS3-201ENST00000227474 TTC37Q6PGP7 1564 aa11.85□□□□□ -0.51
PUS3-201ENST00000227474 RBM10P98175 930 aaKnown RBP11.85□□□□□ -0.51
PUS3-201ENST00000227474 PRDM16Q9HAZ2 1276 aa11.85□□□□□ -0.51
PUS3-201ENST00000227474 PLEKHH2Q8IVE3 1493 aa11.85□□□□□ -0.51
PUS3-201ENST00000227474 NUP155O75694 1391 aa11.84□□□□□ -0.51
PUS3-201ENST00000227474 UHRF1BP1Q6BDS2 1440 aa11.83□□□□□ -0.52
PUS3-201ENST00000227474 NCLP19338 710 aaKnown RBP11.83□□□□□ -0.52
PUS3-201ENST00000227474 ARHGAP5Q13017 1502 aa11.82□□□□□ -0.52
PUS3-201ENST00000227474 SYCP2Q9BX26 1530 aa11.82□□□□□ -0.52
PUS3-201ENST00000227474 ARHGEF12Q9NZN5 1544 aa11.82□□□□□ -0.52
PUS3-201ENST00000227474 CCDC7Q96M83 1385 aa11.82□□□□□ -0.52
PUS3-201ENST00000227474 PLCH2O75038 1416 aa11.81□□□□□ -0.52
PUS3-201ENST00000227474 CNTLNQ9NXG0 1405 aa11.81□□□□□ -0.52
PUS3-201ENST00000227474 PLXNC1O60486 1568 aa11.81□□□□□ -0.52
PUS3-201ENST00000227474 PRDM10Q9NQV6 1147 aa11.81□□□□□ -0.52
PUS3-201ENST00000227474 ZCCHC11Q5TAX3 1644 aaKnown RBP11.8□□□□□ -0.52
PUS3-201ENST00000227474 C11orf95C9JLR9 678 aaPredicted RBP11.8□□□□□ -0.52
PUS3-201ENST00000227474 ARID4BQ4LE39 1312 aaPredicted RBP11.8□□□□□ -0.52
PUS3-201ENST00000227474 UNC13BO14795 1591 aa11.79□□□□□ -0.52
PUS3-201ENST00000227474 FAM135AQ9P2D6 1515 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms