RNA–Protein interactions for RNA: ENST00000226951.10

CLNK-201, Transcript of cytokine dependent hematopoietic cell linker, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLNK, Length 5,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNK-201ENST00000226951 FOXD4L1Q9NU39 408 aa12.15□□□□□ -0.46
CLNK-201ENST00000226951 SMARCA2P51531 1590 aa12.15□□□□□ -0.46
CLNK-201ENST00000226951 BRPF3Q9ULD4 1205 aa12.15□□□□□ -0.46
CLNK-201ENST00000226951 HMMRO75330 724 aa12.15□□□□□ -0.47
CLNK-201ENST00000226951 UBE2Q2Q8WVN8 375 aa12.14□□□□□ -0.47
CLNK-201ENST00000226951 CUX1P39880 1505 aa12.14□□□□□ -0.47
CLNK-201ENST00000226951 PODXL2Q9NZ53 605 aa12.14□□□□□ -0.47
CLNK-201ENST00000226951 NAP1L2Q9ULW6 460 aaPredicted RBP12.14□□□□□ -0.47
CLNK-201ENST00000226951 KIF21BO75037 1637 aa12.14□□□□□ -0.47
CLNK-201ENST00000226951 CCDC66A2RUB6 948 aa12.14□□□□□ -0.47
CLNK-201ENST00000226951 SMG6Q86US8 1419 aaKnown RBP12.13□□□□□ -0.47
CLNK-201ENST00000226951 CCDC7Q96M83 1385 aa12.13□□□□□ -0.47
CLNK-201ENST00000226951 DIAPH3Q9NSV4 1193 aa12.13□□□□□ -0.47
CLNK-201ENST00000226951 NUCB2P80303 420 aa12.12□□□□□ -0.47
CLNK-201ENST00000226951 GNL2Q13823 731 aaKnown RBP12.12□□□□□ -0.47
CLNK-201ENST00000226951 GPATCH3Q96I76 525 aa12.12□□□□□ -0.47
CLNK-201ENST00000226951 TAF3Q5VWG9 929 aa12.11□□□□□ -0.47
CLNK-201ENST00000226951 A0A0U1RQG5 324 aaPredicted RBP12.11□□□□□ -0.47
CLNK-201ENST00000226951 NASPP49321 788 aaPredicted RBP12.11□□□□□ -0.47
CLNK-201ENST00000226951 POGKQ9P215 609 aa12.11□□□□□ -0.47
CLNK-201ENST00000226951 R3HCC1Q9Y3T6 440 aaKnown RBP12.11□□□□□ -0.47
CLNK-201ENST00000226951 USP47Q96K76 1375 aa12.1□□□□□ -0.47
CLNK-201ENST00000226951 FOXD1Q16676 465 aa12.1□□□□□ -0.47
CLNK-201ENST00000226951 CCDC34Q96HJ3 373 aa12.1□□□□□ -0.47
CLNK-201ENST00000226951 BRD4O60885 1362 aaPredicted RBP12.1□□□□□ -0.47
CLNK-201ENST00000226951 PLIN1O60240 522 aa12.09□□□□□ -0.47
CLNK-201ENST00000226951 LETM1O95202 739 aaPredicted RBP12.09□□□□□ -0.47
CLNK-201ENST00000226951 NOC3LQ8WTT2 800 aaKnown RBP12.09□□□□□ -0.47
CLNK-201ENST00000226951 CWC15Q9P013 229 aaKnown RBP12.09□□□□□ -0.47
CLNK-201ENST00000226951 ZKSCAN2Q63HK3 967 aa12.09□□□□□ -0.47
CLNK-201ENST00000226951 ARGLU1Q9NWB6 273 aaPredicted RBP12.08□□□□□ -0.47
CLNK-201ENST00000226951 GOLGA6L19H0YKK7 550 aa12.08□□□□□ -0.48
CLNK-201ENST00000226951 CHMP4CQ96CF2 233 aa12.08□□□□□ -0.48
CLNK-201ENST00000226951 CCDC146Q8IYE0 955 aa12.08□□□□□ -0.48
CLNK-201ENST00000226951 UACAQ9BZF9 1416 aa12.08□□□□□ -0.48
CLNK-201ENST00000226951 TRAK2O60296 914 aa12.08□□□□□ -0.48
CLNK-201ENST00000226951 U2AF1L5P0DN76 240 aaPredicted RBP12.07□□□□□ -0.48
CLNK-201ENST00000226951 HMGN5P82970 282 aaKnown RBP12.07□□□□□ -0.48
CLNK-201ENST00000226951 U2AF1Q01081 240 aaKnown RBP eCLIP12.07□□□□□ -0.48
CLNK-201ENST00000226951 NUP155O75694 1391 aa12.07□□□□□ -0.48
CLNK-201ENST00000226951 RRBP1Q9P2E9 1410 aaKnown RBP12.07□□□□□ -0.48
CLNK-201ENST00000226951 HDGFL2Q7Z4V5 671 aaPredicted RBP12.07□□□□□ -0.48
CLNK-201ENST00000226951 KIF3AQ9Y496 699 aa12.07□□□□□ -0.48
CLNK-201ENST00000226951 PAK3O75914 559 aaPredicted RBP12.07□□□□□ -0.48
CLNK-201ENST00000226951 NINLQ9Y2I6 1382 aa12.07□□□□□ -0.48
CLNK-201ENST00000226951 LMOD3Q0VAK6 560 aa12.07□□□□□ -0.48
CLNK-201ENST00000226951 CHMP4AQ9BY43 222 aa12.07□□□□□ -0.48
CLNK-201ENST00000226951 C22orf23Q9BZE7 217 aa12.06□□□□□ -0.48
CLNK-201ENST00000226951 DDX19BQ9UMR2 479 aa12.06□□□□□ -0.48
CLNK-201ENST00000226951 MIA2Q96PC5 1412 aa12.06□□□□□ -0.48
CLNK-201ENST00000226951 RTF1Q92541 710 aaKnown RBP12.06□□□□□ -0.48
CLNK-201ENST00000226951 HSP90B1P14625 803 aaKnown RBP12.05□□□□□ -0.48
CLNK-201ENST00000226951 CALRP27797 417 aaKnown RBP12.05□□□□□ -0.48
CLNK-201ENST00000226951 BACH2Q9BYV9 841 aa12.05□□□□□ -0.48
CLNK-201ENST00000226951 TRIM6-TRIM34B2RNG4 842 aa12.05□□□□□ -0.48
CLNK-201ENST00000226951 MSH5O43196 834 aa12.05□□□□□ -0.48
CLNK-201ENST00000226951 REC8O95072 547 aa12.04□□□□□ -0.48
CLNK-201ENST00000226951 CCDC70Q6NSX1 233 aa12.04□□□□□ -0.48
CLNK-201ENST00000226951 HDAC5Q9UQL6 1122 aa12.04□□□□□ -0.48
CLNK-201ENST00000226951 APBB1O00213 710 aa12.04□□□□□ -0.48
CLNK-201ENST00000226951 ACBD3Q9H3P7 528 aa12.04□□□□□ -0.48
CLNK-201ENST00000226951 MCTP1Q6DN14 999 aa12.03□□□□□ -0.48
CLNK-201ENST00000226951 ROCK1Q13464 1354 aa12.03□□□□□ -0.48
CLNK-201ENST00000226951 FRAT2O75474 233 aaPredicted RBP12.03□□□□□ -0.48
CLNK-201ENST00000226951 GRPEL1Q9HAV7 217 aa12.02□□□□□ -0.49
CLNK-201ENST00000226951 ZNF592Q92610 1267 aa12.02□□□□□ -0.49
CLNK-201ENST00000226951 ANKRD45Q5TZF3 282 aa12.02□□□□□ -0.49
CLNK-201ENST00000226951 SRPK2P78362 688 aaKnown RBP12.01□□□□□ -0.49
CLNK-201ENST00000226951 CLUAP1Q96AJ1 413 aa12.01□□□□□ -0.49
CLNK-201ENST00000226951 FHOD3Q2V2M9 1422 aa12.01□□□□□ -0.49
CLNK-201ENST00000226951 FOXD4L5Q5VV16 416 aaPredicted RBP12.01□□□□□ -0.49
CLNK-201ENST00000226951 FOXD4L4Q8WXT5 416 aaPredicted RBP12.01□□□□□ -0.49
CLNK-201ENST00000226951 PANK3Q9H999 370 aa12.01□□□□□ -0.49
CLNK-201ENST00000226951 SMARCA4P51532 1647 aa12.01□□□□□ -0.49
CLNK-201ENST00000226951 BECN2A8MW95 431 aa12.01□□□□□ -0.49
CLNK-201ENST00000226951 KIF7Q2M1P5 1343 aa12.01□□□□□ -0.49
CLNK-201ENST00000226951 C14orf37Q86TY3 774 aa12.01□□□□□ -0.49
CLNK-201ENST00000226951 TSPY26PQ9H489 355 aa12.01□□□□□ -0.49
CLNK-201ENST00000226951 INTS3Q68E01 1043 aaKnown RBP12□□□□□ -0.49
CLNK-201ENST00000226951 COG6Q9Y2V7 657 aa12□□□□□ -0.49
CLNK-201ENST00000226951 MBD3O95983 291 aa12□□□□□ -0.49
CLNK-201ENST00000226951 NOL8Q76FK4 1167 aaKnown RBP12□□□□□ -0.49
CLNK-201ENST00000226951 ERICH3Q5RHP9 1530 aa11.99□□□□□ -0.49
CLNK-201ENST00000226951 SPAG9O60271 1321 aaKnown RBP11.99□□□□□ -0.49
CLNK-201ENST00000226951 UQCRHLA0A096LP55 91 aa11.99□□□□□ -0.49
CLNK-201ENST00000226951 UQCRHP07919 91 aa11.99□□□□□ -0.49
CLNK-201ENST00000226951 STK31Q9BXU1 1019 aa11.99□□□□□ -0.49
CLNK-201ENST00000226951 RUSC2Q8N2Y8 1516 aa11.99□□□□□ -0.49
CLNK-201ENST00000226951 H3BQV1 296 aa11.99□□□□□ -0.49
CLNK-201ENST00000226951 IFFO2Q5TF58 517 aa11.99□□□□□ -0.49
CLNK-201ENST00000226951 LRRC9Q6ZRR7 1453 aa11.98□□□□□ -0.49
CLNK-201ENST00000226951 AEBP2Q6ZN18 517 aaPredicted RBP11.98□□□□□ -0.49
CLNK-201ENST00000226951 CCDC144AA2RUR9 1427 aa11.98□□□□□ -0.49
CLNK-201ENST00000226951 CCP110O43303 1012 aa11.98□□□□□ -0.49
CLNK-201ENST00000226951 TPM1P09493 284 aa11.98□□□□□ -0.49
CLNK-201ENST00000226951 DZIP1LQ8IYY4 767 aaKnown RBP11.98□□□□□ -0.49
CLNK-201ENST00000226951 IFT57Q9NWB7 429 aa11.97□□□□□ -0.49
CLNK-201ENST00000226951 TAOK2Q9UL54 1235 aa11.97□□□□□ -0.49
CLNK-201ENST00000226951 ST20-MTHFSA0A0A6YYL1 179 aa11.97□□□□□ -0.49
CLNK-201ENST00000226951 FGD6Q6ZV73 1430 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms