RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 ANKRD30BQ9BXX2 1392 aa16.33■□□□□ 0.2
TNFAIP1-201ENST00000226225 ARHGEF5Q12774 1597 aa16.31■□□□□ 0.2
TNFAIP1-201ENST00000226225 ABCC1P33527 1531 aa16.31■□□□□ 0.2
TNFAIP1-201ENST00000226225 ZNF518AQ6AHZ1 1483 aa16.3■□□□□ 0.2
TNFAIP1-201ENST00000226225 CCDC144AA2RUR9 1427 aa16.3■□□□□ 0.2
TNFAIP1-201ENST00000226225 STAG3Q9UJ98 1225 aa16.29■□□□□ 0.2
TNFAIP1-201ENST00000226225 DHX29Q7Z478 1369 aaKnown RBP16.29■□□□□ 0.2
TNFAIP1-201ENST00000226225 EIF4G2P78344 907 aaKnown RBP eCLIP16.28■□□□□ 0.2
TNFAIP1-201ENST00000226225 PZPP20742 1482 aa16.28■□□□□ 0.2
TNFAIP1-201ENST00000226225 ABCA9Q8IUA7 1624 aa16.28■□□□□ 0.2
TNFAIP1-201ENST00000226225 GCC2Q8IWJ2 1684 aa16.26■□□□□ 0.19
TNFAIP1-201ENST00000226225 NBPF8Q3BBV2 869 aa16.25■□□□□ 0.19
TNFAIP1-201ENST00000226225 CARD11Q9BXL7 1154 aa16.25■□□□□ 0.19
TNFAIP1-201ENST00000226225 DUOX2Q9NRD8 1548 aa16.25■□□□□ 0.19
TNFAIP1-201ENST00000226225 RTEL1-TNFRSF6BF6WH68 1400 aa16.25■□□□□ 0.19
TNFAIP1-201ENST00000226225 NUTM2DQ5VT03 806 aaPredicted RBP16.24■□□□□ 0.19
TNFAIP1-201ENST00000226225 TSPOAP1O95153 1857 aa16.24■□□□□ 0.19
TNFAIP1-201ENST00000226225 POGZQ7Z3K3 1410 aa16.24■□□□□ 0.19
TNFAIP1-201ENST00000226225 HSPA5P11021 654 aaKnown RBP16.24■□□□□ 0.19
TNFAIP1-201ENST00000226225 ATP7AQ04656 1500 aa16.24■□□□□ 0.19
TNFAIP1-201ENST00000226225 NEFLP07196 543 aa16.23■□□□□ 0.19
TNFAIP1-201ENST00000226225 DNAJC5Q9H3Z4 198 aa16.23■□□□□ 0.19
TNFAIP1-201ENST00000226225 ADGBQ8N7X0 1667 aa16.22■□□□□ 0.19
TNFAIP1-201ENST00000226225 ERBINQ96RT1 1412 aa16.22■□□□□ 0.19
TNFAIP1-201ENST00000226225 A2MP01023 1474 aa16.22■□□□□ 0.19
TNFAIP1-201ENST00000226225 NEO1Q92859 1461 aa16.21■□□□□ 0.19
TNFAIP1-201ENST00000226225 FAM135AQ9P2D6 1515 aa16.21■□□□□ 0.18
TNFAIP1-201ENST00000226225 YEATS2Q9ULM3 1422 aa16.2■□□□□ 0.18
TNFAIP1-201ENST00000226225 ARAP3Q8WWN8 1544 aa16.2■□□□□ 0.18
TNFAIP1-201ENST00000226225 TEX14Q8IWB6 1497 aa16.18■□□□□ 0.18
TNFAIP1-201ENST00000226225 IRX6P78412 446 aaPredicted RBP16.18■□□□□ 0.18
TNFAIP1-201ENST00000226225 CROCC2H7BZ55 1655 aa16.18■□□□□ 0.18
TNFAIP1-201ENST00000226225 RPRD2Q5VT52 1461 aaKnown RBP16.18■□□□□ 0.18
TNFAIP1-201ENST00000226225 RBM19Q9Y4C8 960 aaKnown RBP16.17■□□□□ 0.18
TNFAIP1-201ENST00000226225 ZFYVE16Q7Z3T8 1539 aa16.17■□□□□ 0.18
TNFAIP1-201ENST00000226225 FBXO31Q5XUX0 539 aaPredicted RBP16.14■□□□□ 0.17
TNFAIP1-201ENST00000226225 ROCK2O75116 1388 aaKnown RBP16.13■□□□□ 0.17
TNFAIP1-201ENST00000226225 NBPF1Q3BBV0 1214 aa16.13■□□□□ 0.17
TNFAIP1-201ENST00000226225 ERICH6Q7L0X2 663 aa16.11■□□□□ 0.17
TNFAIP1-201ENST00000226225 MLH3Q9UHC1 1453 aa16.11■□□□□ 0.17
TNFAIP1-201ENST00000226225 MAST1Q9Y2H9 1570 aa16.11■□□□□ 0.17
TNFAIP1-201ENST00000226225 DIP2BQ9P265 1576 aa16.1■□□□□ 0.17
TNFAIP1-201ENST00000226225 ST20-MTHFSA0A0A6YYL1 179 aa16.09■□□□□ 0.17
TNFAIP1-201ENST00000226225 ANP32CO43423 234 aa16.09■□□□□ 0.17
TNFAIP1-201ENST00000226225 PLXNC1O60486 1568 aa16.08■□□□□ 0.17
TNFAIP1-201ENST00000226225 CFAP74Q9C0B2 1584 aa16.08■□□□□ 0.17
TNFAIP1-201ENST00000226225 IDI1Q13907 227 aa16.06■□□□□ 0.16
TNFAIP1-201ENST00000226225 CEBPAP49715 358 aaPredicted RBP16.06■□□□□ 0.16
TNFAIP1-201ENST00000226225 COL17A1Q9UMD9 1497 aaPredicted RBP16.06■□□□□ 0.16
TNFAIP1-201ENST00000226225 HECW2Q9P2P5 1572 aa16.05■□□□□ 0.16
TNFAIP1-201ENST00000226225 USP47Q96K76 1375 aa16.05■□□□□ 0.16
TNFAIP1-201ENST00000226225 CFAP70Q5T0N1 1121 aa16.04■□□□□ 0.16
TNFAIP1-201ENST00000226225 SENP3-EIF4A1A0A087X0R7 540 aa16.04■□□□□ 0.16
TNFAIP1-201ENST00000226225 ATP10AO60312 1499 aa16.03■□□□□ 0.16
TNFAIP1-201ENST00000226225 PLA2R1Q13018 1463 aa16.03■□□□□ 0.16
TNFAIP1-201ENST00000226225 CFAP65Q6ZU64 1925 aaKnown RBP16.03■□□□□ 0.16
TNFAIP1-201ENST00000226225 SAFB2Q14151 953 aaKnown RBP eCLIP16.03■□□□□ 0.16
TNFAIP1-201ENST00000226225 STK26Q9P289 416 aa16.03■□□□□ 0.16
TNFAIP1-201ENST00000226225 GLI2P10070 1586 aa16.02■□□□□ 0.16
TNFAIP1-201ENST00000226225 KIDINS220Q9ULH0 1771 aa16.02■□□□□ 0.16
TNFAIP1-201ENST00000226225 INO80Q9ULG1 1556 aaPredicted RBP16.02■□□□□ 0.15
TNFAIP1-201ENST00000226225 TMEM132EQ6IEE7 984 aa16.01■□□□□ 0.15
TNFAIP1-201ENST00000226225 C11orf95C9JLR9 678 aaPredicted RBP16■□□□□ 0.15
TNFAIP1-201ENST00000226225 MAP3K4Q9Y6R4 1608 aa16■□□□□ 0.15
TNFAIP1-201ENST00000226225 TRAK1Q9UPV9 953 aa16■□□□□ 0.15
TNFAIP1-201ENST00000226225 WASHC2AQ641Q2 1341 aa16■□□□□ 0.15
TNFAIP1-201ENST00000226225 ADGRF5Q8IZF2 1346 aa16■□□□□ 0.15
TNFAIP1-201ENST00000226225 NPATQ14207 1427 aa15.99■□□□□ 0.15
TNFAIP1-201ENST00000226225 KDM5DQ9BY66 1539 aa15.99■□□□□ 0.15
TNFAIP1-201ENST00000226225 MSH5O43196 834 aa15.99■□□□□ 0.15
TNFAIP1-201ENST00000226225 SLC52A1Q9NWF4 448 aa15.98■□□□□ 0.15
TNFAIP1-201ENST00000226225 KDM5CP41229 1560 aa15.97■□□□□ 0.15
TNFAIP1-201ENST00000226225 VGFO15240 615 aaPredicted RBP15.97■□□□□ 0.15
TNFAIP1-201ENST00000226225 UGGT1Q9NYU2 1555 aa15.96■□□□□ 0.15
TNFAIP1-201ENST00000226225 UNC13BO14795 1591 aa15.96■□□□□ 0.14
TNFAIP1-201ENST00000226225 ABCA6Q8N139 1617 aa15.95■□□□□ 0.14
TNFAIP1-201ENST00000226225 KIF7Q2M1P5 1343 aa15.94■□□□□ 0.14
TNFAIP1-201ENST00000226225 IQGAP3Q86VI3 1631 aa15.94■□□□□ 0.14
TNFAIP1-201ENST00000226225 DIP2CQ9Y2E4 1556 aa15.93■□□□□ 0.14
TNFAIP1-201ENST00000226225 MAGI2Q86UL8 1455 aa15.93■□□□□ 0.14
TNFAIP1-201ENST00000226225 HNRNPUQ00839 825 aaKnown RBP eCLIP15.93■□□□□ 0.14
TNFAIP1-201ENST00000226225 TMF1P82094 1093 aa15.93■□□□□ 0.14
TNFAIP1-201ENST00000226225 PRDM15P57071 1507 aaPredicted RBP15.92■□□□□ 0.14
TNFAIP1-201ENST00000226225 TMC1Q8TDI8 760 aa15.91■□□□□ 0.14
TNFAIP1-201ENST00000226225 ZMYM3Q14202 1370 aa15.91■□□□□ 0.14
TNFAIP1-201ENST00000226225 PPP6R1Q9UPN7 881 aa15.91■□□□□ 0.14
TNFAIP1-201ENST00000226225 NOS1P29475 1434 aa15.91■□□□□ 0.14
TNFAIP1-201ENST00000226225 FRMPD1Q5SYB0 1578 aa15.91■□□□□ 0.14
TNFAIP1-201ENST00000226225 POGKQ9P215 609 aa15.9■□□□□ 0.14
TNFAIP1-201ENST00000226225 PRAG1Q86YV5 1406 aa15.9■□□□□ 0.14
TNFAIP1-201ENST00000226225 CCDC7Q96M83 1385 aa15.89■□□□□ 0.13
TNFAIP1-201ENST00000226225 STAC3Q96MF2 364 aa15.89■□□□□ 0.13
TNFAIP1-201ENST00000226225 PTPRTO14522 1441 aa15.88■□□□□ 0.13
TNFAIP1-201ENST00000226225 ABCC3O15438 1527 aa15.88■□□□□ 0.13
TNFAIP1-201ENST00000226225 NBR1Q14596 966 aa15.87■□□□□ 0.13
TNFAIP1-201ENST00000226225 RICTORQ6R327 1708 aa15.87■□□□□ 0.13
TNFAIP1-201ENST00000226225 SPATA31E1Q6ZUB1 1445 aa15.86■□□□□ 0.13
TNFAIP1-201ENST00000226225 E9PCH4 1651 aa15.86■□□□□ 0.13
TNFAIP1-201ENST00000226225 HDGFP51858 240 aaKnown RBP15.86■□□□□ 0.13
TNFAIP1-201ENST00000226225 CNTLNQ9NXG0 1405 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms