RNA–Protein interactions for RNA: ENST00000218364.4

HTATSF1-201, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 2,775 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-201ENST00000218364 RALBP1Q15311 655 aa29.84■■■□□ 2.37
HTATSF1-201ENST00000218364 MYBBP1AQ9BQG0 1328 aaKnown RBP29.83■■■□□ 2.37
HTATSF1-201ENST00000218364 CCDC136Q96JN2 1154 aa29.83■■■□□ 2.37
HTATSF1-201ENST00000218364 ST20-MTHFSA0A0A6YYL1 179 aa29.82■■■□□ 2.36
HTATSF1-201ENST00000218364 TSPY4P0CV99 314 aa29.82■■■□□ 2.36
HTATSF1-201ENST00000218364 TSPY10P0CW01 314 aa29.82■■■□□ 2.36
HTATSF1-201ENST00000218364 OSCARQ8IYS5 282 aa29.8■■■□□ 2.36
HTATSF1-201ENST00000218364 CLASP1Q7Z460 1538 aa29.79■■■□□ 2.36
HTATSF1-201ENST00000218364 DCAF11Q8TEB1 546 aa29.76■■■□□ 2.35
HTATSF1-201ENST00000218364 NOP58Q9Y2X3 529 aaKnown RBP29.75■■■□□ 2.35
HTATSF1-201ENST00000218364 KDM2AQ9Y2K7 1162 aa29.75■■■□□ 2.35
HTATSF1-201ENST00000218364 FAM135AQ9P2D6 1515 aa29.71■■■□□ 2.35
HTATSF1-201ENST00000218364 SHROOM2Q13796 1616 aa29.7■■■□□ 2.35
HTATSF1-201ENST00000218364 TRPM1Q7Z4N2 1603 aa29.7■■■□□ 2.34
HTATSF1-201ENST00000218364 HNRNPMP52272 730 aaKnown RBP eCLIP29.69■■■□□ 2.34
HTATSF1-201ENST00000218364 PRAG1Q86YV5 1406 aa29.69■■■□□ 2.34
HTATSF1-201ENST00000218364 CCDC141Q6ZP82 1450 aa29.69■■■□□ 2.34
HTATSF1-201ENST00000218364 PARD3Q8TEW0 1356 aa29.69■■■□□ 2.34
HTATSF1-201ENST00000218364 SAMD9LQ8IVG5 1584 aa29.66■■■□□ 2.34
HTATSF1-201ENST00000218364 RSPH4AQ5TD94 716 aa29.65■■■□□ 2.34
HTATSF1-201ENST00000218364 NLRP13Q86W25 1043 aa29.65■■■□□ 2.34
HTATSF1-201ENST00000218364 RRP1P56182 461 aaKnown RBP29.65■■■□□ 2.34
HTATSF1-201ENST00000218364 GPRASP1Q5JY77 1395 aa29.64■■■□□ 2.34
HTATSF1-201ENST00000218364 SENP3-EIF4A1A0A087X0R7 540 aa29.64■■■□□ 2.33
HTATSF1-201ENST00000218364 PDE3BQ13370 1112 aa29.63■■■□□ 2.33
HTATSF1-201ENST00000218364 PREX2Q70Z35 1606 aa29.63■■■□□ 2.33
HTATSF1-201ENST00000218364 LAMC1P11047 1609 aa29.62■■■□□ 2.33
HTATSF1-201ENST00000218364 PAK3O75914 559 aaPredicted RBP29.61■■■□□ 2.33
HTATSF1-201ENST00000218364 CCDC144AA2RUR9 1427 aa29.61■■■□□ 2.33
HTATSF1-201ENST00000218364 IPO9Q96P70 1041 aaKnown RBP29.61■■■□□ 2.33
HTATSF1-201ENST00000218364 ANP32AP39687 249 aaKnown RBP29.6■■■□□ 2.33
HTATSF1-201ENST00000218364 CDC42BPBQ9Y5S2 1711 aa29.6■■■□□ 2.33
HTATSF1-201ENST00000218364 PER1O15534 1290 aaPredicted RBP29.6■■■□□ 2.33
HTATSF1-201ENST00000218364 INSRP06213 1382 aa29.59■■■□□ 2.33
HTATSF1-201ENST00000218364 UNC13BO14795 1591 aa29.59■■■□□ 2.33
HTATSF1-201ENST00000218364 ERCC6L2Q5T890 1561 aa29.59■■■□□ 2.33
HTATSF1-201ENST00000218364 MAST1Q9Y2H9 1570 aa29.58■■■□□ 2.33
HTATSF1-201ENST00000218364 RCAN3Q9UKA8 241 aa29.58■■■□□ 2.33
HTATSF1-201ENST00000218364 WASHC2CQ9Y4E1 1318 aa29.58■■■□□ 2.33
HTATSF1-201ENST00000218364 PLA2R1Q13018 1463 aa29.56■■■□□ 2.32
HTATSF1-201ENST00000218364 ZMYM4Q5VZL5 1548 aa29.56■■■□□ 2.32
HTATSF1-201ENST00000218364 COL17A1Q9UMD9 1497 aaPredicted RBP29.56■■■□□ 2.32
HTATSF1-201ENST00000218364 PRDM15P57071 1507 aaPredicted RBP29.54■■■□□ 2.32
HTATSF1-201ENST00000218364 A2MP01023 1474 aa29.54■■■□□ 2.32
HTATSF1-201ENST00000218364 EXOC6Q8TAG9 804 aa29.52■■■□□ 2.32
HTATSF1-201ENST00000218364 NBPF1Q3BBV0 1214 aa29.51■■■□□ 2.31
HTATSF1-201ENST00000218364 DEKP35659 375 aaKnown RBP29.51■■■□□ 2.31
HTATSF1-201ENST00000218364 TCERG1O14776 1098 aaKnown RBP29.49■■■□□ 2.31
HTATSF1-201ENST00000218364 TESK2Q96S53 571 aa29.48■■■□□ 2.31
HTATSF1-201ENST00000218364 BLMP54132 1417 aaPredicted RBP29.48■■■□□ 2.31
HTATSF1-201ENST00000218364 IQGAP3Q86VI3 1631 aa29.47■■■□□ 2.31
HTATSF1-201ENST00000218364 EIF2AK4Q9P2K8 1649 aaKnown RBP29.47■■■□□ 2.31
HTATSF1-201ENST00000218364 SYCP2Q9BX26 1530 aa29.47■■■□□ 2.31
HTATSF1-201ENST00000218364 ZBTB47Q9UFB7 747 aaPredicted RBP29.46■■■□□ 2.31
HTATSF1-201ENST00000218364 ATP10AO60312 1499 aa29.45■■■□□ 2.31
HTATSF1-201ENST00000218364 PLXNC1O60486 1568 aa29.45■■■□□ 2.31
HTATSF1-201ENST00000218364 DISP3Q9P2K9 1392 aa29.45■■■□□ 2.3
HTATSF1-201ENST00000218364 RGL3Q3MIN7 710 aa29.44■■■□□ 2.3
HTATSF1-201ENST00000218364 ERBINQ96RT1 1412 aa29.43■■■□□ 2.3
HTATSF1-201ENST00000218364 MYO5CQ9NQX4 1742 aa29.41■■■□□ 2.3
HTATSF1-201ENST00000218364 SALL2Q9Y467 1007 aaPredicted RBP29.4■■■□□ 2.3
HTATSF1-201ENST00000218364 MS4A1P11836 297 aa29.4■■■□□ 2.3
HTATSF1-201ENST00000218364 NBR1Q14596 966 aa29.4■■■□□ 2.3
HTATSF1-201ENST00000218364 PLEKHH2Q8IVE3 1493 aa29.39■■■□□ 2.3
HTATSF1-201ENST00000218364 TTC37Q6PGP7 1564 aa29.39■■■□□ 2.3
HTATSF1-201ENST00000218364 ARHGAP5Q13017 1502 aa29.39■■■□□ 2.3
HTATSF1-201ENST00000218364 MAGI2Q86UL8 1455 aa29.39■■■□□ 2.3
HTATSF1-201ENST00000218364 CDCA7LQ96GN5 454 aa29.39■■■□□ 2.29
HTATSF1-201ENST00000218364 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.37■■■□□ 2.29
HTATSF1-201ENST00000218364 PANK3Q9H999 370 aa29.37■■■□□ 2.29
HTATSF1-201ENST00000218364 TMF1P82094 1093 aa29.35■■■□□ 2.29
HTATSF1-201ENST00000218364 CC2D1BQ5T0F9 858 aaKnown RBP29.35■■■□□ 2.29
HTATSF1-201ENST00000218364 RNF17Q9BXT8 1623 aaKnown RBP29.35■■■□□ 2.29
HTATSF1-201ENST00000218364 DUOX2Q9NRD8 1548 aa29.35■■■□□ 2.29
HTATSF1-201ENST00000218364 PDE4AP27815 886 aa29.34■■■□□ 2.29
HTATSF1-201ENST00000218364 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.33■■■□□ 2.291e-7■■■■□ 20.5
HTATSF1-201ENST00000218364 BACH2Q9BYV9 841 aa29.32■■■□□ 2.28
HTATSF1-201ENST00000218364 WDR7Q9Y4E6 1490 aa29.24■■■□□ 2.27
HTATSF1-201ENST00000218364 RTL5Q5HYW3 569 aaPredicted RBP29.24■■■□□ 2.27
HTATSF1-201ENST00000218364 ABCC2Q92887 1545 aa29.23■■■□□ 2.27
HTATSF1-201ENST00000218364 PLIN1O60240 522 aa29.22■■■□□ 2.27
HTATSF1-201ENST00000218364 CRBNQ96SW2 442 aa29.22■■■□□ 2.27
HTATSF1-201ENST00000218364 NPM2Q86SE8 214 aaKnown RBP29.19■■■□□ 2.26
HTATSF1-201ENST00000218364 IQGAP1P46940 1657 aa29.19■■■□□ 2.26
HTATSF1-201ENST00000218364 MADDQ8WXG6 1647 aa29.19■■■□□ 2.26
HTATSF1-201ENST00000218364 ADAMTS8Q9UP79 889 aa29.18■■■□□ 2.26
HTATSF1-201ENST00000218364 UHRF1BP1LA0JNW5 1464 aa29.17■■■□□ 2.26
HTATSF1-201ENST00000218364 PLCH2O75038 1416 aa29.15■■■□□ 2.26
HTATSF1-201ENST00000218364 PPP2R1AP30153 589 aa29.14■■■□□ 2.26
HTATSF1-201ENST00000218364 SYNMO15061 1565 aa29.13■■■□□ 2.25
HTATSF1-201ENST00000218364 AMER1Q5JTC6 1135 aaPredicted RBP29.12■■■□□ 2.25
HTATSF1-201ENST00000218364 STAC3Q96MF2 364 aa29.12■■■□□ 2.25
HTATSF1-201ENST00000218364 KNSTRNQ9Y448 316 aa29.12■■■□□ 2.25
HTATSF1-201ENST00000218364 ZNF521Q96K83 1311 aa29.12■■■□□ 2.25
HTATSF1-201ENST00000218364 RIMBP3CA6NJZ7 1639 aa29.11■■■□□ 2.25
HTATSF1-201ENST00000218364 RIMBP3BA6NNM3 1639 aa29.11■■■□□ 2.25
HTATSF1-201ENST00000218364 RIMBP3Q9UFD9 1639 aa29.11■■■□□ 2.25
HTATSF1-201ENST00000218364 SCAPERQ9BY12 1400 aa29.11■■■□□ 2.25
HTATSF1-201ENST00000218364 KDM2BQ8NHM5 1336 aa29.11■■■□□ 2.25
HTATSF1-201ENST00000218364 PLEKHH1Q9ULM0 1364 aa29.11■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms