RNA–Protein interactions for RNA: ENST00000217957.9

VSIG1-201, Transcript of V-set and immunoglobulin domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VSIG1, Length 2,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG1-201ENST00000217957 REPIN1Q9BWE0 567 aaKnown RBP12.34□□□□□ -0.43
VSIG1-201ENST00000217957 BRD1O95696 1058 aa12.33□□□□□ -0.44
VSIG1-201ENST00000217957 PROCA1Q8NCQ7 364 aaPredicted RBP12.33□□□□□ -0.44
VSIG1-201ENST00000217957 SNRKQ9NRH2 765 aa12.33□□□□□ -0.44
VSIG1-201ENST00000217957 SND1Q7KZF4 910 aaKnown RBP eCLIP12.32□□□□□ -0.44
VSIG1-201ENST00000217957 SIRT1Q96EB6 747 aa12.31□□□□□ -0.44
VSIG1-201ENST00000217957 CALR3Q96L12 384 aaKnown RBP12.31□□□□□ -0.44
VSIG1-201ENST00000217957 FOSBP53539 338 aa12.31□□□□□ -0.44
VSIG1-201ENST00000217957 CLASP1Q7Z460 1538 aa12.3□□□□□ -0.44
VSIG1-201ENST00000217957 GDPD2Q9HCC8 539 aa12.3□□□□□ -0.44
VSIG1-201ENST00000217957 PCMTD1Q96MG8 357 aaPredicted RBP12.3□□□□□ -0.44
VSIG1-201ENST00000217957 RASEFQ8IZ41 740 aa12.3□□□□□ -0.44
VSIG1-201ENST00000217957 BCL11AQ9H165 835 aa12.29□□□□□ -0.44
VSIG1-201ENST00000217957 CADPSQ9ULU8 1353 aa12.29□□□□□ -0.44
VSIG1-201ENST00000217957 SPATA32Q96LK8 384 aa12.28□□□□□ -0.44
VSIG1-201ENST00000217957 GLMNQ92990 594 aa12.27□□□□□ -0.44
VSIG1-201ENST00000217957 POLR3EQ9NVU0 708 aa12.27□□□□□ -0.44
VSIG1-201ENST00000217957 KDM6BO15054 1643 aa12.27□□□□□ -0.45
VSIG1-201ENST00000217957 FBXO31Q5XUX0 539 aaPredicted RBP12.27□□□□□ -0.45
VSIG1-201ENST00000217957 NOL8Q76FK4 1167 aaKnown RBP12.27□□□□□ -0.45
VSIG1-201ENST00000217957 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.27□□□□□ -0.45
VSIG1-201ENST00000217957 LMTK3Q96Q04 1460 aa12.26□□□□□ -0.45
VSIG1-201ENST00000217957 GIGYF2Q6Y7W6 1299 aaKnown RBP12.26□□□□□ -0.45
VSIG1-201ENST00000217957 ATAD2BQ9ULI0 1458 aa12.25□□□□□ -0.45
VSIG1-201ENST00000217957 GIMAP6Q6P9H5 292 aa12.25□□□□□ -0.45
VSIG1-201ENST00000217957 TICAM2Q86XR7 235 aa12.25□□□□□ -0.45
VSIG1-201ENST00000217957 FAM212AQ96EL1 285 aa12.25□□□□□ -0.45
VSIG1-201ENST00000217957 FBXO41Q8TF61 875 aa12.24□□□□□ -0.45
VSIG1-201ENST00000217957 BCCIPQ9P287 314 aaKnown RBP eCLIP12.24□□□□□ -0.45
VSIG1-201ENST00000217957 ACIN1Q9UKV3 1341 aaKnown RBP12.23□□□□□ -0.45
VSIG1-201ENST00000217957 ANKRD62A6NC57 917 aa12.22□□□□□ -0.45
VSIG1-201ENST00000217957 TXNDC2Q86VQ3 553 aa12.22□□□□□ -0.45
VSIG1-201ENST00000217957 SSUH2Q9Y2M2 353 aa12.22□□□□□ -0.45
VSIG1-201ENST00000217957 ABCC8Q09428 1581 aa12.22□□□□□ -0.45
VSIG1-201ENST00000217957 CDCA8Q53HL2 280 aa12.21□□□□□ -0.45
VSIG1-201ENST00000217957 KCNA1Q09470 495 aa12.21□□□□□ -0.46
VSIG1-201ENST00000217957 MARCH6O60337 910 aa12.2□□□□□ -0.46
VSIG1-201ENST00000217957 PRDM10Q9NQV6 1147 aa12.2□□□□□ -0.46
VSIG1-201ENST00000217957 ARAP1Q96P48 1450 aa12.2□□□□□ -0.46
VSIG1-201ENST00000217957 AMHR2Q16671 573 aa12.2□□□□□ -0.46
VSIG1-201ENST00000217957 IRF6O14896 467 aa12.19□□□□□ -0.46
VSIG1-201ENST00000217957 NEFLP07196 543 aa12.18□□□□□ -0.46
VSIG1-201ENST00000217957 SMARCA4P51532 1647 aa12.18□□□□□ -0.46
VSIG1-201ENST00000217957 NOM1Q5C9Z4 860 aaKnown RBP12.17□□□□□ -0.46
VSIG1-201ENST00000217957 GOPCQ9HD26 462 aa12.17□□□□□ -0.46
VSIG1-201ENST00000217957 IFT140Q96RY7 1462 aa12.17□□□□□ -0.46
VSIG1-201ENST00000217957 CAPN15O75808 1086 aa12.17□□□□□ -0.46
VSIG1-201ENST00000217957 TCF3P15923 654 aa12.17□□□□□ -0.46
VSIG1-201ENST00000217957 ABL2P42684 1182 aa12.17□□□□□ -0.46
VSIG1-201ENST00000217957 SGIP1Q9BQI5 828 aa12.17□□□□□ -0.46
VSIG1-201ENST00000217957 NUTM2FA1L443 756 aa12.16□□□□□ -0.46
VSIG1-201ENST00000217957 DPYSL4O14531 572 aa12.16□□□□□ -0.46
VSIG1-201ENST00000217957 OXER1Q8TDS5 423 aa12.16□□□□□ -0.46
VSIG1-201ENST00000217957 IQSEC2Q5JU85 1478 aa12.15□□□□□ -0.46
VSIG1-201ENST00000217957 PPP1R15AO75807 674 aaPredicted RBP12.15□□□□□ -0.46
VSIG1-201ENST00000217957 RBM47A0AV96 593 aaKnown RBP12.14□□□□□ -0.47
VSIG1-201ENST00000217957 ZNF16P17020 682 aaPredicted RBP12.14□□□□□ -0.47
VSIG1-201ENST00000217957 TAGLNQ01995 201 aaKnown RBP12.14□□□□□ -0.47
VSIG1-201ENST00000217957 MAP2K5Q13163 448 aa12.14□□□□□ -0.47
VSIG1-201ENST00000217957 ADAMTS19Q8TE59 1207 aa12.14□□□□□ -0.47
VSIG1-201ENST00000217957 DDX27Q96GQ7 796 aaKnown RBP12.14□□□□□ -0.47
VSIG1-201ENST00000217957 NLRP7Q8WX94 980 aa12.13□□□□□ -0.47
VSIG1-201ENST00000217957 ANKRD13AQ8IZ07 590 aa12.13□□□□□ -0.47
VSIG1-201ENST00000217957 PBXIP1Q96AQ6 731 aa12.13□□□□□ -0.47
VSIG1-201ENST00000217957 DRC1Q96MC2 740 aa12.12□□□□□ -0.47
VSIG1-201ENST00000217957 KIF13AQ9H1H9 1805 aa12.12□□□□□ -0.47
VSIG1-201ENST00000217957 CC2D2BQ6DHV5 1058 aa12.12□□□□□ -0.47
VSIG1-201ENST00000217957 PCDHB8Q9UN66 801 aa12.12□□□□□ -0.47
VSIG1-201ENST00000217957 PCDHB13Q9Y5F0 798 aa12.12□□□□□ -0.47
VSIG1-201ENST00000217957 MICAL1Q8TDZ2 1067 aa12.12□□□□□ -0.47
VSIG1-201ENST00000217957 GIPC2Q8TF65 315 aa12.12□□□□□ -0.47
VSIG1-201ENST00000217957 SREK1Q8WXA9 508 aaKnown RBP12.12□□□□□ -0.47
VSIG1-201ENST00000217957 PHF8Q9UPP1 1060 aa12.11□□□□□ -0.47
VSIG1-201ENST00000217957 TOP2BQ02880 1626 aa12.11□□□□□ -0.47
VSIG1-201ENST00000217957 LOC102724159A0A0B4J2E5 919 aa12.1□□□□□ -0.47
VSIG1-201ENST00000217957 RAB11FIP3O75154 756 aa12.1□□□□□ -0.47
VSIG1-201ENST00000217957 CLSTN1O94985 981 aa12.1□□□□□ -0.47
VSIG1-201ENST00000217957 PWP2Q15269 919 aaKnown RBP12.1□□□□□ -0.47
VSIG1-201ENST00000217957 HIRIP3Q9BW71 556 aaPredicted RBP12.1□□□□□ -0.47
VSIG1-201ENST00000217957 CSB-PGBD3P0DP91 1061 aa12.1□□□□□ -0.47
VSIG1-201ENST00000217957 ZNF467Q7Z7K2 595 aaPredicted RBP12.1□□□□□ -0.47
VSIG1-201ENST00000217957 VTI1AQ96AJ9 217 aa12.1□□□□□ -0.47
VSIG1-201ENST00000217957 MINK1Q8N4C8 1332 aaPredicted RBP12.09□□□□□ -0.47
VSIG1-201ENST00000217957 TBC1D2BQ9UPU7 963 aa12.09□□□□□ -0.47
VSIG1-201ENST00000217957 GRXCR2A6NFK2 248 aa12.07□□□□□ -0.48
VSIG1-201ENST00000217957 DNAJC2Q99543 621 aaKnown RBP12.07□□□□□ -0.48
VSIG1-201ENST00000217957 SLC52A1Q9NWF4 448 aa12.07□□□□□ -0.48
VSIG1-201ENST00000217957 RBM27Q9P2N5 1060 aaKnown RBP12.06□□□□□ -0.48
VSIG1-201ENST00000217957 CFAP70Q5T0N1 1121 aa12.06□□□□□ -0.48
VSIG1-201ENST00000217957 MTMR14Q8NCE2 650 aa12.06□□□□□ -0.48
VSIG1-201ENST00000217957 SCNN1AP37088 669 aa12.06□□□□□ -0.48
VSIG1-201ENST00000217957 CHD1O14646 1710 aa12.05□□□□□ -0.48
VSIG1-201ENST00000217957 SYNJ1O43426 1573 aa12.05□□□□□ -0.48
VSIG1-201ENST00000217957 SH3D19Q5HYK7 790 aa12.05□□□□□ -0.48
VSIG1-201ENST00000217957 MAPKBP1O60336 1514 aa12.05□□□□□ -0.48
VSIG1-201ENST00000217957 BCL2L13Q9BXK5 485 aa12.04□□□□□ -0.48
VSIG1-201ENST00000217957 KLHL42Q9P2K6 505 aa12.04□□□□□ -0.48
VSIG1-201ENST00000217957 RIPOR2Q9Y4F9 1068 aa12.04□□□□□ -0.48
VSIG1-201ENST00000217957 PPME1Q9Y570 386 aa12.04□□□□□ -0.48
VSIG1-201ENST00000217957 C9orf131Q5VYM1 1079 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms