RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 ARHGEF5Q12774 1597 aa12.38□□□□□ -0.43
MTHFD1-201ENST00000216605 NBPF8Q3BBV2 869 aa12.38□□□□□ -0.43
MTHFD1-201ENST00000216605 ANO8Q9HCE9 1232 aaPredicted RBP12.38□□□□□ -0.43
MTHFD1-201ENST00000216605 RPRD2Q5VT52 1461 aaKnown RBP12.38□□□□□ -0.43
MTHFD1-201ENST00000216605 DCAF11Q8TEB1 546 aa12.37□□□□□ -0.43
MTHFD1-201ENST00000216605 TRAPPC8Q9Y2L5 1435 aa12.37□□□□□ -0.43
MTHFD1-201ENST00000216605 CNGB1Q14028 1251 aaPredicted RBP12.36□□□□□ -0.43
MTHFD1-201ENST00000216605 FANCAO15360 1455 aa12.35□□□□□ -0.43
MTHFD1-201ENST00000216605 KIF3BO15066 747 aa12.35□□□□□ -0.43
MTHFD1-201ENST00000216605 ARHGEF12Q9NZN5 1544 aa12.34□□□□□ -0.43
MTHFD1-201ENST00000216605 SCAPERQ9BY12 1400 aa12.34□□□□□ -0.43
MTHFD1-201ENST00000216605 SUPT16HQ9Y5B9 1047 aaKnown RBP12.34□□□□□ -0.43
MTHFD1-201ENST00000216605 ADGRL1O94910 1474 aa12.32□□□□□ -0.44
MTHFD1-201ENST00000216605 CARD11Q9BXL7 1154 aa12.31□□□□□ -0.44
MTHFD1-201ENST00000216605 CCDC144AA2RUR9 1427 aa12.31□□□□□ -0.44
MTHFD1-201ENST00000216605 CD109Q6YHK3 1445 aa12.3□□□□□ -0.44
MTHFD1-201ENST00000216605 FAM135AQ9P2D6 1515 aa12.29□□□□□ -0.44
MTHFD1-201ENST00000216605 ABCC1P33527 1531 aa12.29□□□□□ -0.44
MTHFD1-201ENST00000216605 DUOX2Q9NRD8 1548 aa12.29□□□□□ -0.44
MTHFD1-201ENST00000216605 KANK1Q14678 1352 aa12.28□□□□□ -0.44
MTHFD1-201ENST00000216605 TEX14Q8IWB6 1497 aa12.28□□□□□ -0.44
MTHFD1-201ENST00000216605 WASHC2AQ641Q2 1341 aa12.28□□□□□ -0.44
MTHFD1-201ENST00000216605 GGT6Q6P531 493 aa12.28□□□□□ -0.44
MTHFD1-201ENST00000216605 ERBINQ96RT1 1412 aa12.25□□□□□ -0.45
MTHFD1-201ENST00000216605 MAST1Q9Y2H9 1570 aa12.25□□□□□ -0.45
MTHFD1-201ENST00000216605 RAPGEF3O95398 923 aa12.25□□□□□ -0.45
MTHFD1-201ENST00000216605 CHGAP10645 457 aaKnown RBP12.25□□□□□ -0.45
MTHFD1-201ENST00000216605 C11orf95C9JLR9 678 aaPredicted RBP12.24□□□□□ -0.45
MTHFD1-201ENST00000216605 FAM69CQ0P6D2 419 aa12.24□□□□□ -0.45
MTHFD1-201ENST00000216605 USP47Q96K76 1375 aa12.24□□□□□ -0.45
MTHFD1-201ENST00000216605 TSHZ2Q9NRE2 1034 aa12.24□□□□□ -0.45
MTHFD1-201ENST00000216605 ROCK2O75116 1388 aaKnown RBP12.23□□□□□ -0.45
MTHFD1-201ENST00000216605 RTEL1-TNFRSF6BF6WH68 1400 aa12.23□□□□□ -0.45
MTHFD1-201ENST00000216605 ABCA9Q8IUA7 1624 aa12.23□□□□□ -0.45
MTHFD1-201ENST00000216605 PLXNC1O60486 1568 aa12.23□□□□□ -0.45
MTHFD1-201ENST00000216605 KDM5DQ9BY66 1539 aa12.23□□□□□ -0.45
MTHFD1-201ENST00000216605 ARAP3Q8WWN8 1544 aa12.22□□□□□ -0.45
MTHFD1-201ENST00000216605 ATP7AQ04656 1500 aa12.21□□□□□ -0.45
MTHFD1-201ENST00000216605 CCDC7Q96M83 1385 aa12.21□□□□□ -0.46
MTHFD1-201ENST00000216605 ST20-MTHFSA0A0A6YYL1 179 aa12.21□□□□□ -0.46
MTHFD1-201ENST00000216605 PKNOX2Q96KN3 472 aa12.21□□□□□ -0.46
MTHFD1-201ENST00000216605 KIF7Q2M1P5 1343 aa12.21□□□□□ -0.46
MTHFD1-201ENST00000216605 DHX29Q7Z478 1369 aaKnown RBP12.2□□□□□ -0.46
MTHFD1-201ENST00000216605 ZFYVE16Q7Z3T8 1539 aa12.19□□□□□ -0.46
MTHFD1-201ENST00000216605 ZNF518AQ6AHZ1 1483 aa12.19□□□□□ -0.46
MTHFD1-201ENST00000216605 NBPF1Q3BBV0 1214 aa12.19□□□□□ -0.46
MTHFD1-201ENST00000216605 CCER2I3L3R5 266 aa12.18□□□□□ -0.46
MTHFD1-201ENST00000216605 WASHC2CQ9Y4E1 1318 aa12.18□□□□□ -0.46
MTHFD1-201ENST00000216605 UNC13BO14795 1591 aa12.17□□□□□ -0.46
MTHFD1-201ENST00000216605 NPM2Q86SE8 214 aaKnown RBP12.17□□□□□ -0.46
MTHFD1-201ENST00000216605 C14orf37Q86TY3 774 aa12.16□□□□□ -0.46
MTHFD1-201ENST00000216605 PLA2R1Q13018 1463 aa12.16□□□□□ -0.46
MTHFD1-201ENST00000216605 CNTLNQ9NXG0 1405 aa12.15□□□□□ -0.46
MTHFD1-201ENST00000216605 IQGAP3Q86VI3 1631 aa12.15□□□□□ -0.46
MTHFD1-201ENST00000216605 A2MP01023 1474 aa12.14□□□□□ -0.47
MTHFD1-201ENST00000216605 FAM9BQ8IZU0 186 aa12.14□□□□□ -0.47
MTHFD1-201ENST00000216605 MRS2Q9HD23 443 aa12.13□□□□□ -0.47
MTHFD1-201ENST00000216605 POGZQ7Z3K3 1410 aa12.13□□□□□ -0.47
MTHFD1-201ENST00000216605 SENP3Q9H4L4 574 aaPredicted RBP12.13□□□□□ -0.47
MTHFD1-201ENST00000216605 UHRF1BP1Q6BDS2 1440 aa12.13□□□□□ -0.47
MTHFD1-201ENST00000216605 RALGAPBQ86X10 1494 aa12.13□□□□□ -0.47
MTHFD1-201ENST00000216605 SPATA31E1Q6ZUB1 1445 aa12.12□□□□□ -0.47
MTHFD1-201ENST00000216605 HNRNPUQ00839 825 aaKnown RBP eCLIP12.12□□□□□ -0.47
MTHFD1-201ENST00000216605 RIMBP3CA6NJZ7 1639 aa12.11□□□□□ -0.47
MTHFD1-201ENST00000216605 RIMBP3BA6NNM3 1639 aa12.11□□□□□ -0.47
MTHFD1-201ENST00000216605 RIMBP3Q9UFD9 1639 aa12.11□□□□□ -0.47
MTHFD1-201ENST00000216605 PRKRIP1Q9H875 184 aaPredicted RBP12.11□□□□□ -0.47
MTHFD1-201ENST00000216605 PRAG1Q86YV5 1406 aa12.11□□□□□ -0.47
MTHFD1-201ENST00000216605 INO80Q9ULG1 1556 aaPredicted RBP12.11□□□□□ -0.47
MTHFD1-201ENST00000216605 CFAP74Q9C0B2 1584 aa12.1□□□□□ -0.47
MTHFD1-201ENST00000216605 MLECQ14165 292 aa12.1□□□□□ -0.47
MTHFD1-201ENST00000216605 MAGI2Q86UL8 1455 aa12.1□□□□□ -0.47
MTHFD1-201ENST00000216605 BCANQ96GW7 911 aa12.09□□□□□ -0.47
MTHFD1-201ENST00000216605 SALL2Q9Y467 1007 aaPredicted RBP12.09□□□□□ -0.47
MTHFD1-201ENST00000216605 NEO1Q92859 1461 aa12.09□□□□□ -0.47
MTHFD1-201ENST00000216605 ERICH6BQ5W0A0 696 aa12.09□□□□□ -0.47
MTHFD1-201ENST00000216605 ATP10AO60312 1499 aa12.08□□□□□ -0.48
MTHFD1-201ENST00000216605 KIDINS220Q9ULH0 1771 aa12.08□□□□□ -0.48
MTHFD1-201ENST00000216605 NEFLP07196 543 aa12.08□□□□□ -0.48
MTHFD1-201ENST00000216605 TMF1P82094 1093 aa12.08□□□□□ -0.48
MTHFD1-201ENST00000216605 NUTM2DQ5VT03 806 aaPredicted RBP12.08□□□□□ -0.48
MTHFD1-201ENST00000216605 CFAP65Q6ZU64 1925 aaKnown RBP12.08□□□□□ -0.48
MTHFD1-201ENST00000216605 FKBP8Q14318 412 aa12.07□□□□□ -0.48
MTHFD1-201ENST00000216605 E9PCH4 1651 aa12.07□□□□□ -0.48
MTHFD1-201ENST00000216605 MLH3Q9UHC1 1453 aa12.07□□□□□ -0.48
MTHFD1-201ENST00000216605 CCDC184Q52MB2 194 aa12.06□□□□□ -0.48
MTHFD1-201ENST00000216605 ARID4BQ4LE39 1312 aaPredicted RBP12.06□□□□□ -0.48
MTHFD1-201ENST00000216605 CFAP70Q5T0N1 1121 aa12.06□□□□□ -0.48
MTHFD1-201ENST00000216605 STAG3Q9UJ98 1225 aa12.06□□□□□ -0.48
MTHFD1-201ENST00000216605 HECW2Q9P2P5 1572 aa12.06□□□□□ -0.48
MTHFD1-201ENST00000216605 KDM5CP41229 1560 aa12.05□□□□□ -0.48
MTHFD1-201ENST00000216605 TSPOAP1O95153 1857 aa12.05□□□□□ -0.48
MTHFD1-201ENST00000216605 HAP1P54257 671 aaPredicted RBP12.05□□□□□ -0.48
MTHFD1-201ENST00000216605 TMC1Q8TDI8 760 aa12.05□□□□□ -0.48
MTHFD1-201ENST00000216605 ESF1Q9H501 851 aaKnown RBP12.05□□□□□ -0.48
MTHFD1-201ENST00000216605 TET3O43151 1660 aa12.04□□□□□ -0.48
MTHFD1-201ENST00000216605 STAC3Q96MF2 364 aa12.04□□□□□ -0.48
MTHFD1-201ENST00000216605 YEATS2Q9ULM3 1422 aa12.04□□□□□ -0.48
MTHFD1-201ENST00000216605 UGGT1Q9NYU2 1555 aa12.03□□□□□ -0.48
MTHFD1-201ENST00000216605 CCDC136Q96JN2 1154 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms