RNA–Protein interactions for RNA: ENST00000194152.3

PCDHB4-201, Transcript of protocadherin beta 4, humanhuman

APPRIS P1 BASIC

Gene PCDHB4, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-201ENST00000194152 ABCA5Q8WWZ7 1642 aa17.1■□□□□ 0.33
PCDHB4-201ENST00000194152 DISP1Q96F81 1524 aa17.1■□□□□ 0.33
PCDHB4-201ENST00000194152 ERICH6BQ5W0A0 696 aa17.1■□□□□ 0.33
PCDHB4-201ENST00000194152 NCOA1Q15788 1441 aa17.1■□□□□ 0.33
PCDHB4-201ENST00000194152 NUTM2FA1L443 756 aa17.09■□□□□ 0.33
PCDHB4-201ENST00000194152 ATP10BO94823 1461 aa17.09■□□□□ 0.33
PCDHB4-201ENST00000194152 ADAMTS12P58397 1594 aa17.08■□□□□ 0.32
PCDHB4-201ENST00000194152 GPATCH8Q9UKJ3 1502 aaKnown RBP17.08■□□□□ 0.32
PCDHB4-201ENST00000194152 EIF4G3O43432 1585 aaKnown RBP17.08■□□□□ 0.32
PCDHB4-201ENST00000194152 PLIN1O60240 522 aa17.08■□□□□ 0.32
PCDHB4-201ENST00000194152 CFAP70Q5T0N1 1121 aa17.08■□□□□ 0.32
PCDHB4-201ENST00000194152 MAGI1Q96QZ7 1491 aaPredicted RBP17.07■□□□□ 0.32
PCDHB4-201ENST00000194152 TARBP1Q13395 1621 aaKnown RBP17.07■□□□□ 0.32
PCDHB4-201ENST00000194152 UGGT2Q9NYU1 1516 aa17.07■□□□□ 0.32
PCDHB4-201ENST00000194152 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.07■□□□□ 0.32
PCDHB4-201ENST00000194152 SCAPERQ9BY12 1400 aa17.07■□□□□ 0.32
PCDHB4-201ENST00000194152 RSPH4AQ5TD94 716 aa17.04■□□□□ 0.32
PCDHB4-201ENST00000194152 KIAA1107Q9UPP5 1409 aa17.03■□□□□ 0.32
PCDHB4-201ENST00000194152 SRPK2P78362 688 aaKnown RBP17.03■□□□□ 0.32
PCDHB4-201ENST00000194152 POGKQ9P215 609 aa17.03■□□□□ 0.32
PCDHB4-201ENST00000194152 KANK1Q14678 1352 aa17.03■□□□□ 0.32
PCDHB4-201ENST00000194152 RRP7AQ9Y3A4 280 aaKnown RBP17.02■□□□□ 0.31
PCDHB4-201ENST00000194152 TRHP20396 242 aaPredicted RBP17.01■□□□□ 0.31
PCDHB4-201ENST00000194152 KDM6BO15054 1643 aa17.01■□□□□ 0.31
PCDHB4-201ENST00000194152 CFAP43Q8NDM7 1665 aa17.01■□□□□ 0.31
PCDHB4-201ENST00000194152 CDCA7LQ96GN5 454 aa17■□□□□ 0.31
PCDHB4-201ENST00000194152 U2SURPO15042 1029 aaKnown RBP17■□□□□ 0.31
PCDHB4-201ENST00000194152 WDR62O43379 1518 aa17■□□□□ 0.31
PCDHB4-201ENST00000194152 AKNAQ7Z591 1439 aa17■□□□□ 0.31
PCDHB4-201ENST00000194152 FAM69CQ0P6D2 419 aa16.99■□□□□ 0.31
PCDHB4-201ENST00000194152 CNTLNQ9NXG0 1405 aa16.99■□□□□ 0.31
PCDHB4-201ENST00000194152 KTN1Q86UP2 1357 aaKnown RBP16.98■□□□□ 0.31
PCDHB4-201ENST00000194152 KIAA0556O60303 1618 aa16.98■□□□□ 0.31
PCDHB4-201ENST00000194152 PBRM1Q86U86 1689 aa16.98■□□□□ 0.31
PCDHB4-201ENST00000194152 PLEKHH2Q8IVE3 1493 aa16.98■□□□□ 0.31
PCDHB4-201ENST00000194152 FRAT1Q92837 279 aaPredicted RBP16.98■□□□□ 0.31
PCDHB4-201ENST00000194152 RAPGEF6Q8TEU7 1601 aa16.97■□□□□ 0.31
PCDHB4-201ENST00000194152 ARXQ96QS3 562 aa16.97■□□□□ 0.31
PCDHB4-201ENST00000194152 ZBTB7CA1YPR0 619 aa16.96■□□□□ 0.31
PCDHB4-201ENST00000194152 IPO9Q96P70 1041 aaKnown RBP16.96■□□□□ 0.31
PCDHB4-201ENST00000194152 BRPF3Q9ULD4 1205 aa16.95■□□□□ 0.3
PCDHB4-201ENST00000194152 CEP170Q5SW79 1584 aa16.94■□□□□ 0.3
PCDHB4-201ENST00000194152 UBE2Q2Q8WVN8 375 aa16.94■□□□□ 0.3
PCDHB4-201ENST00000194152 SAMD9Q5K651 1589 aa16.94■□□□□ 0.3
PCDHB4-201ENST00000194152 MORC1Q86VD1 984 aa16.94■□□□□ 0.3
PCDHB4-201ENST00000194152 KIF14Q15058 1648 aa16.93■□□□□ 0.3
PCDHB4-201ENST00000194152 ROCK1Q13464 1354 aa16.93■□□□□ 0.3
PCDHB4-201ENST00000194152 RGS3P49796 1198 aa16.92■□□□□ 0.3
PCDHB4-201ENST00000194152 NLRP13Q86W25 1043 aa16.92■□□□□ 0.3
PCDHB4-201ENST00000194152 MINK1Q8N4C8 1332 aaPredicted RBP16.92■□□□□ 0.3
PCDHB4-201ENST00000194152 C14orf37Q86TY3 774 aa16.92■□□□□ 0.3
PCDHB4-201ENST00000194152 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.9■□□□□ 0.3
PCDHB4-201ENST00000194152 BCL2L13Q9BXK5 485 aa16.9■□□□□ 0.3
PCDHB4-201ENST00000194152 CDCA8Q53HL2 280 aa16.9■□□□□ 0.3
PCDHB4-201ENST00000194152 RCAN3Q9UKA8 241 aa16.9■□□□□ 0.3
PCDHB4-201ENST00000194152 RPRD2Q5VT52 1461 aaKnown RBP16.89■□□□□ 0.29
PCDHB4-201ENST00000194152 NUDCQ9Y266 331 aa16.89■□□□□ 0.29
PCDHB4-201ENST00000194152 SKAP1Q86WV1 359 aa16.89■□□□□ 0.29
PCDHB4-201ENST00000194152 MYBBP1AQ9BQG0 1328 aaKnown RBP16.89■□□□□ 0.29
PCDHB4-201ENST00000194152 EXOC6Q8TAG9 804 aa16.88■□□□□ 0.29
PCDHB4-201ENST00000194152 RALBP1Q15311 655 aa16.88■□□□□ 0.29
PCDHB4-201ENST00000194152 SLC12A5Q9H2X9 1139 aa16.88■□□□□ 0.29
PCDHB4-201ENST00000194152 ADAMTS8Q9UP79 889 aa16.87■□□□□ 0.29
PCDHB4-201ENST00000194152 APAF1O14727 1248 aa16.87■□□□□ 0.29
PCDHB4-201ENST00000194152 CABP2Q9NPB3 220 aa16.87■□□□□ 0.29
PCDHB4-201ENST00000194152 PKNOX2Q96KN3 472 aa16.86■□□□□ 0.29
PCDHB4-201ENST00000194152 TRAPPC8Q9Y2L5 1435 aa16.85■□□□□ 0.29
PCDHB4-201ENST00000194152 U2AF1L5P0DN76 240 aaPredicted RBP16.85■□□□□ 0.29
PCDHB4-201ENST00000194152 U2AF1Q01081 240 aaKnown RBP eCLIP16.85■□□□□ 0.29
PCDHB4-201ENST00000194152 CLUAP1Q96AJ1 413 aa16.85■□□□□ 0.29
PCDHB4-201ENST00000194152 CCDC141Q6ZP82 1450 aa16.85■□□□□ 0.29
PCDHB4-201ENST00000194152 PNISRQ8TF01 805 aaKnown RBP16.84■□□□□ 0.29
PCDHB4-201ENST00000194152 ZBED9Q6R2W3 1325 aa16.84■□□□□ 0.29
PCDHB4-201ENST00000194152 GLIPR1L2Q4G1C9 344 aa16.84■□□□□ 0.29
PCDHB4-201ENST00000194152 ADGRF5Q8IZF2 1346 aa16.84■□□□□ 0.29
PCDHB4-201ENST00000194152 NUP160Q12769 1436 aa16.84■□□□□ 0.29
PCDHB4-201ENST00000194152 SYCP2Q9BX26 1530 aa16.84■□□□□ 0.29
PCDHB4-201ENST00000194152 FBXO31Q5XUX0 539 aaPredicted RBP16.82■□□□□ 0.28
PCDHB4-201ENST00000194152 ERCC6L2Q5T890 1561 aa16.82■□□□□ 0.28
PCDHB4-201ENST00000194152 PZPP20742 1482 aa16.82■□□□□ 0.28
PCDHB4-201ENST00000194152 TCOF1Q13428 1488 aaKnown RBP16.82■□□□□ 0.28
PCDHB4-201ENST00000194152 VSIG10Q8N0Z9 540 aa16.81■□□□□ 0.28
PCDHB4-201ENST00000194152 GGNBP2Q9H3C7 697 aa16.8■□□□□ 0.28
PCDHB4-201ENST00000194152 LMOD2Q6P5Q4 547 aa16.78■□□□□ 0.28
PCDHB4-201ENST00000194152 DISP3Q9P2K9 1392 aa16.78■□□□□ 0.28
PCDHB4-201ENST00000194152 SLC4A3P48751 1232 aa16.77■□□□□ 0.28
PCDHB4-201ENST00000194152 TCERG1O14776 1098 aaKnown RBP16.77■□□□□ 0.27
PCDHB4-201ENST00000194152 FBLN1P23142 703 aa16.76■□□□□ 0.27
PCDHB4-201ENST00000194152 CFAP53Q96M91 514 aa16.76■□□□□ 0.27
PCDHB4-201ENST00000194152 LRRIQ1Q96JM4 1722 aa16.76■□□□□ 0.27
PCDHB4-201ENST00000194152 ELL2O00472 640 aaPredicted RBP16.75■□□□□ 0.27
PCDHB4-201ENST00000194152 DENND4BO75064 1496 aaPredicted RBP16.74■□□□□ 0.27
PCDHB4-201ENST00000194152 CRBNQ96SW2 442 aa16.74■□□□□ 0.27
PCDHB4-201ENST00000194152 PPP2R1AP30153 589 aa16.73■□□□□ 0.27
PCDHB4-201ENST00000194152 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.73■□□□□ 0.27
PCDHB4-201ENST00000194152 CENPJQ9HC77 1338 aaPredicted RBP16.73■□□□□ 0.27
PCDHB4-201ENST00000194152 CFAP65Q6ZU64 1925 aaKnown RBP16.73■□□□□ 0.27
PCDHB4-201ENST00000194152 GOLGA2Q08379 1002 aa16.71■□□□□ 0.27
PCDHB4-201ENST00000194152 ADGRL1O94910 1474 aa16.71■□□□□ 0.27
PCDHB4-201ENST00000194152 FANCAO15360 1455 aa16.71■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms