RNA–Protein interactions for RNA: ENST00000157600.7

LMCD1-201, Transcript of LIM and cysteine rich domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMCD1, Length 8,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-201ENST00000157600 GOLGA6L1Q8N7Z2 621 aa15.58■□□□□ 0.08
LMCD1-201ENST00000157600 L3MBTL2Q969R5 705 aa15.58■□□□□ 0.08
LMCD1-201ENST00000157600 FANCD2Q9BXW9 1451 aa15.57■□□□□ 0.08
LMCD1-201ENST00000157600 GORABQ5T7V8 394 aa15.56■□□□□ 0.08
LMCD1-201ENST00000157600 EVC2Q86UK5 1308 aa15.56■□□□□ 0.08
LMCD1-201ENST00000157600 TDRD9Q8NDG6 1382 aaKnown RBP15.56■□□□□ 0.08
LMCD1-201ENST00000157600 WASHC2CQ9Y4E1 1318 aa15.56■□□□□ 0.08
LMCD1-201ENST00000157600 USP47Q96K76 1375 aa15.55■□□□□ 0.08
LMCD1-201ENST00000157600 STK26Q9P289 416 aa15.55■□□□□ 0.08
LMCD1-201ENST00000157600 MIA2Q96PC5 1412 aa15.55■□□□□ 0.08
LMCD1-201ENST00000157600 SUPT6HQ7KZ85 1726 aaKnown RBP15.54■□□□□ 0.08
LMCD1-201ENST00000157600 TRIM6-TRIM34B2RNG4 842 aa15.54■□□□□ 0.08
LMCD1-201ENST00000157600 NOC3LQ8WTT2 800 aaKnown RBP15.54■□□□□ 0.08
LMCD1-201ENST00000157600 EFCAB5A4FU69 1503 aa15.54■□□□□ 0.08
LMCD1-201ENST00000157600 FYCO1Q9BQS8 1478 aa15.53■□□□□ 0.08
LMCD1-201ENST00000157600 SCAPERQ9BY12 1400 aa15.53■□□□□ 0.08
LMCD1-201ENST00000157600 VGFO15240 615 aaPredicted RBP15.53■□□□□ 0.08
LMCD1-201ENST00000157600 DHX57Q6P158 1386 aaKnown RBP15.53■□□□□ 0.08
LMCD1-201ENST00000157600 KIF3BO15066 747 aa15.53■□□□□ 0.08
LMCD1-201ENST00000157600 FAM161AQ3B820 660 aa15.53■□□□□ 0.08
LMCD1-201ENST00000157600 SAFB2Q14151 953 aaKnown RBP eCLIP15.52■□□□□ 0.08
LMCD1-201ENST00000157600 REC8O95072 547 aa15.52■□□□□ 0.07
LMCD1-201ENST00000157600 PAK3O75914 559 aaPredicted RBP15.51■□□□□ 0.07
LMCD1-201ENST00000157600 TAF7LQ5H9L4 462 aa15.51■□□□□ 0.07
LMCD1-201ENST00000157600 GAPVD1Q14C86 1478 aa15.51■□□□□ 0.07
LMCD1-201ENST00000157600 FOXD1Q16676 465 aa15.5■□□□□ 0.07
LMCD1-201ENST00000157600 SENP3-EIF4A1A0A087X0R7 540 aa15.5■□□□□ 0.07
LMCD1-201ENST00000157600 SLKQ9H2G2 1235 aaPredicted RBP15.5■□□□□ 0.07
LMCD1-201ENST00000157600 CSB-PGBD3P0DP91 1061 aa15.49■□□□□ 0.07
LMCD1-201ENST00000157600 HSP90B1P14625 803 aaKnown RBP15.49■□□□□ 0.07
LMCD1-201ENST00000157600 MFAP1P55081 439 aaKnown RBP15.49■□□□□ 0.07
LMCD1-201ENST00000157600 TULP1O00294 542 aaPredicted RBP15.49■□□□□ 0.07
LMCD1-201ENST00000157600 ZKSCAN2Q63HK3 967 aa15.48■□□□□ 0.07
LMCD1-201ENST00000157600 AMPHP49418 695 aa15.48■□□□□ 0.07
LMCD1-201ENST00000157600 RTN4Q9NQC3 1192 aaKnown RBP15.48■□□□□ 0.07
LMCD1-201ENST00000157600 RUFY2Q8WXA3 655 aa15.48■□□□□ 0.07
LMCD1-201ENST00000157600 SOX12O15370 315 aa15.48■□□□□ 0.07
LMCD1-201ENST00000157600 DDX19BQ9UMR2 479 aa15.48■□□□□ 0.07
LMCD1-201ENST00000157600 WWC1Q8IX03 1113 aa15.47■□□□□ 0.07
LMCD1-201ENST00000157600 TPM3P06753 285 aa15.47■□□□□ 0.07
LMCD1-201ENST00000157600 MLECQ14165 292 aa15.47■□□□□ 0.07
LMCD1-201ENST00000157600 RSPH6AQ9H0K4 717 aa15.47■□□□□ 0.07
LMCD1-201ENST00000157600 SPRYD3Q8NCJ5 442 aa15.47■□□□□ 0.07
LMCD1-201ENST00000157600 RRBP1Q9P2E9 1410 aaKnown RBP15.47■□□□□ 0.07
LMCD1-201ENST00000157600 CLSTN1O94985 981 aa15.47■□□□□ 0.07
LMCD1-201ENST00000157600 NGDNQ8NEJ9 315 aaKnown RBP15.46■□□□□ 0.07
LMCD1-201ENST00000157600 FGD6Q6ZV73 1430 aa15.46■□□□□ 0.07
LMCD1-201ENST00000157600 TSR1Q2NL82 804 aaKnown RBP15.46■□□□□ 0.06
LMCD1-201ENST00000157600 HECW1Q76N89 1606 aa15.45■□□□□ 0.06
LMCD1-201ENST00000157600 APBB1O00213 710 aa15.45■□□□□ 0.06
LMCD1-201ENST00000157600 TPM1P09493 284 aa15.45■□□□□ 0.06
LMCD1-201ENST00000157600 JPH4Q96JJ6 628 aa15.45■□□□□ 0.06
LMCD1-201ENST00000157600 PRKRIP1Q9H875 184 aaPredicted RBP15.45■□□□□ 0.06
LMCD1-201ENST00000157600 ISY1Q9ULR0 285 aaKnown RBP15.45■□□□□ 0.06
LMCD1-201ENST00000157600 TAOK2Q9UL54 1235 aa15.44■□□□□ 0.06
LMCD1-201ENST00000157600 RRP1P56182 461 aaKnown RBP15.44■□□□□ 0.06
LMCD1-201ENST00000157600 ANO8Q9HCE9 1232 aaPredicted RBP15.44■□□□□ 0.06
LMCD1-201ENST00000157600 CNTLNQ9NXG0 1405 aa15.44■□□□□ 0.06
LMCD1-201ENST00000157600 COG3Q96JB2 828 aa15.44■□□□□ 0.06
LMCD1-201ENST00000157600 FANCIQ9NVI1 1328 aa15.44■□□□□ 0.06
LMCD1-201ENST00000157600 FGD5Q6ZNL6 1462 aa15.44■□□□□ 0.06
LMCD1-201ENST00000157600 HNRNPMP52272 730 aaKnown RBP eCLIP15.44■□□□□ 0.06
LMCD1-201ENST00000157600 CPLX2Q6PUV4 134 aaKnown RBP15.44■□□□□ 0.06
LMCD1-201ENST00000157600 HOOK1Q9UJC3 728 aaKnown RBP15.43■□□□□ 0.06
LMCD1-201ENST00000157600 CCDC70Q6NSX1 233 aa15.43■□□□□ 0.06
LMCD1-201ENST00000157600 PTPRGP23470 1445 aa15.43■□□□□ 0.06
LMCD1-201ENST00000157600 EHBP1L1Q8N3D4 1523 aa15.43■□□□□ 0.06
LMCD1-201ENST00000157600 LRRC9Q6ZRR7 1453 aa15.43■□□□□ 0.06
LMCD1-201ENST00000157600 NEXNQ0ZGT2 675 aa15.43■□□□□ 0.06
LMCD1-201ENST00000157600 GZF1Q9H116 711 aaPredicted RBP15.42■□□□□ 0.06
LMCD1-201ENST00000157600 CASKIN1Q8WXD9 1431 aa15.42■□□□□ 0.06
LMCD1-201ENST00000157600 GOLGA6L19H0YKK7 550 aa15.42■□□□□ 0.06
LMCD1-201ENST00000157600 TPM2P07951 284 aa15.42■□□□□ 0.06
LMCD1-201ENST00000157600 CHMP3Q9Y3E7 222 aa15.42■□□□□ 0.06
LMCD1-201ENST00000157600 ST20-MTHFSA0A0A6YYL1 179 aa15.42■□□□□ 0.06
LMCD1-201ENST00000157600 GPS2Q13227 327 aa15.42■□□□□ 0.06
LMCD1-201ENST00000157600 RASSF8Q8NHQ8 419 aa15.42■□□□□ 0.06
LMCD1-201ENST00000157600 SF3A1Q15459 793 aaKnown RBP15.41■□□□□ 0.06
LMCD1-201ENST00000157600 H3BQV1 296 aa15.41■□□□□ 0.06
LMCD1-201ENST00000157600 IFFO2Q5TF58 517 aa15.41■□□□□ 0.06
LMCD1-201ENST00000157600 ZKSCAN1P17029 563 aaPredicted RBP15.41■□□□□ 0.06
LMCD1-201ENST00000157600 TRHP20396 242 aaPredicted RBP15.41■□□□□ 0.06
LMCD1-201ENST00000157600 CEP89Q96ST8 783 aa15.4■□□□□ 0.06
LMCD1-201ENST00000157600 PANK3Q9H999 370 aa15.4■□□□□ 0.06
LMCD1-201ENST00000157600 RNF20Q5VTR2 975 aa15.4■□□□□ 0.06
LMCD1-201ENST00000157600 TSHZ2Q9NRE2 1034 aa15.4■□□□□ 0.06
LMCD1-201ENST00000157600 KAT6BQ8WYB5 2073 aa15.4■□□□□ 0.06
LMCD1-201ENST00000157600 C1orf141Q5JVX7 400 aa15.39■□□□□ 0.05
LMCD1-201ENST00000157600 SLC4A10Q6U841 1118 aa15.39■□□□□ 0.05
LMCD1-201ENST00000157600 WASHC2AQ641Q2 1341 aa15.39■□□□□ 0.05
LMCD1-201ENST00000157600 API5Q9BZZ5 524 aaKnown RBP15.39■□□□□ 0.05
LMCD1-201ENST00000157600 PLEKHH2Q8IVE3 1493 aa15.39■□□□□ 0.05
LMCD1-201ENST00000157600 BRD4O60885 1362 aaPredicted RBP15.38■□□□□ 0.05
LMCD1-201ENST00000157600 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.38■□□□□ 0.05
LMCD1-201ENST00000157600 HSP90AB4PQ58FF6 505 aa15.38■□□□□ 0.05
LMCD1-201ENST00000157600 AKAP17AQ02040 695 aaKnown RBP15.37■□□□□ 0.05
LMCD1-201ENST00000157600 TNNT3P45378 269 aaPredicted RBP15.37■□□□□ 0.05
LMCD1-201ENST00000157600 FAM184AQ8NB25 1140 aa15.37■□□□□ 0.05
LMCD1-201ENST00000157600 ANKRD20A12PQ8NF67 263 aa15.37■□□□□ 0.05
LMCD1-201ENST00000157600 NINLQ9Y2I6 1382 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms