RNA–Protein interactions for RNA: ENST00000054950.3

RCN1-201, Transcript of reticulocalbin 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCN1, Length 2,572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-201ENST00000054950 TSPY10P0CW01 314 aa27.16■■□□□ 1.94
RCN1-201ENST00000054950 IPO9Q96P70 1041 aaKnown RBP27.16■■□□□ 1.94
RCN1-201ENST00000054950 ABCC10Q5T3U5 1492 aa27.15■■□□□ 1.94
RCN1-201ENST00000054950 E9PCH4 1651 aa27.15■■□□□ 1.94
RCN1-201ENST00000054950 RALBP1Q15311 655 aa27.14■■□□□ 1.94
RCN1-201ENST00000054950 RGL3Q3MIN7 710 aa27.13■■□□□ 1.93
RCN1-201ENST00000054950 MAGI1Q96QZ7 1491 aaPredicted RBP27.12■■□□□ 1.93
RCN1-201ENST00000054950 CARMIL2Q6F5E8 1435 aa27.12■■□□□ 1.93
RCN1-201ENST00000054950 SHANK2Q9UPX8 1470 aa27.12■■□□□ 1.93
RCN1-201ENST00000054950 ATP10BO94823 1461 aa27.11■■□□□ 1.93
RCN1-201ENST00000054950 NBPF1Q3BBV0 1214 aa27.11■■□□□ 1.93
RCN1-201ENST00000054950 RCAN3Q9UKA8 241 aa27.11■■□□□ 1.93
RCN1-201ENST00000054950 NPM2Q86SE8 214 aaKnown RBP27.11■■□□□ 1.93
RCN1-201ENST00000054950 CDCA7LQ96GN5 454 aa27.1■■□□□ 1.93
RCN1-201ENST00000054950 SYNJ2O15056 1496 aa27.1■■□□□ 1.93
RCN1-201ENST00000054950 KDM5DQ9BY66 1539 aa27.1■■□□□ 1.93
RCN1-201ENST00000054950 MYT1LQ9UL68 1186 aa27.09■■□□□ 1.93
RCN1-201ENST00000054950 ZBTB47Q9UFB7 747 aaPredicted RBP27.08■■□□□ 1.93
RCN1-201ENST00000054950 ABCA8O94911 1581 aa27.07■■□□□ 1.92
RCN1-201ENST00000054950 PTPRGP23470 1445 aa27.06■■□□□ 1.92
RCN1-201ENST00000054950 CC2D1BQ5T0F9 858 aaKnown RBP27.05■■□□□ 1.92
RCN1-201ENST00000054950 NLRP13Q86W25 1043 aa27.05■■□□□ 1.92
RCN1-201ENST00000054950 KTN1Q86UP2 1357 aaKnown RBP27.05■■□□□ 1.92
RCN1-201ENST00000054950 PARD3Q8TEW0 1356 aa27.04■■□□□ 1.92
RCN1-201ENST00000054950 PLIN1O60240 522 aa27.04■■□□□ 1.92
RCN1-201ENST00000054950 FAM135AQ9P2D6 1515 aa27.03■■□□□ 1.92
RCN1-201ENST00000054950 SKAP1Q86WV1 359 aa27.02■■□□□ 1.92
RCN1-201ENST00000054950 PRAG1Q86YV5 1406 aa27.02■■□□□ 1.92
RCN1-201ENST00000054950 TRPM1Q7Z4N2 1603 aa27.02■■□□□ 1.92
RCN1-201ENST00000054950 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.02■■□□□ 1.92
RCN1-201ENST00000054950 PER1O15534 1290 aaPredicted RBP27.01■■□□□ 1.91
RCN1-201ENST00000054950 NUP160Q12769 1436 aa27■■□□□ 1.91
RCN1-201ENST00000054950 CCDC144AA2RUR9 1427 aa26.98■■□□□ 1.91
RCN1-201ENST00000054950 DISP3Q9P2K9 1392 aa26.98■■□□□ 1.91
RCN1-201ENST00000054950 ERCC6Q03468 1493 aa26.97■■□□□ 1.91
RCN1-201ENST00000054950 SAMD9LQ8IVG5 1584 aa26.96■■□□□ 1.91
RCN1-201ENST00000054950 PDE4AP27815 886 aa26.95■■□□□ 1.9
RCN1-201ENST00000054950 ARHGEF5Q12774 1597 aa26.94■■□□□ 1.9
RCN1-201ENST00000054950 PLA2R1Q13018 1463 aa26.93■■□□□ 1.9
RCN1-201ENST00000054950 CCDC141Q6ZP82 1450 aa26.93■■□□□ 1.9
RCN1-201ENST00000054950 PANK3Q9H999 370 aa26.93■■□□□ 1.9
RCN1-201ENST00000054950 A2MP01023 1474 aa26.93■■□□□ 1.9
RCN1-201ENST00000054950 CDC42BPBQ9Y5S2 1711 aa26.92■■□□□ 1.9
RCN1-201ENST00000054950 TCERG1O14776 1098 aaKnown RBP26.92■■□□□ 1.9
RCN1-201ENST00000054950 RTL5Q5HYW3 569 aaPredicted RBP26.92■■□□□ 1.9
RCN1-201ENST00000054950 TESK2Q96S53 571 aa26.92■■□□□ 1.9
RCN1-201ENST00000054950 PDE3BQ13370 1112 aa26.9■■□□□ 1.9
RCN1-201ENST00000054950 COL17A1Q9UMD9 1497 aaPredicted RBP26.9■■□□□ 1.9
RCN1-201ENST00000054950 LAS1LQ9Y4W2 734 aaKnown RBP26.9■■□□□ 1.9
RCN1-201ENST00000054950 CRBNQ96SW2 442 aa26.89■■□□□ 1.89
RCN1-201ENST00000054950 BACH2Q9BYV9 841 aa26.88■■□□□ 1.89
RCN1-201ENST00000054950 SYCP2Q9BX26 1530 aa26.87■■□□□ 1.89
RCN1-201ENST00000054950 C20orf194Q5TEA3 1177 aa26.84■■□□□ 1.89
RCN1-201ENST00000054950 GPRASP1Q5JY77 1395 aa26.84■■□□□ 1.89
RCN1-201ENST00000054950 PREX2Q70Z35 1606 aa26.84■■□□□ 1.89
RCN1-201ENST00000054950 MYO5CQ9NQX4 1742 aa26.84■■□□□ 1.89
RCN1-201ENST00000054950 ERBINQ96RT1 1412 aa26.83■■□□□ 1.89
RCN1-201ENST00000054950 PRDM15P57071 1507 aaPredicted RBP26.83■■□□□ 1.89
RCN1-201ENST00000054950 BLMP54132 1417 aaPredicted RBP26.83■■□□□ 1.89
RCN1-201ENST00000054950 PLEKHH2Q8IVE3 1493 aa26.8■■□□□ 1.88
RCN1-201ENST00000054950 ADAMTS8Q9UP79 889 aa26.79■■□□□ 1.88
RCN1-201ENST00000054950 UNC13BO14795 1591 aa26.77■■□□□ 1.88
RCN1-201ENST00000054950 TMF1P82094 1093 aa26.77■■□□□ 1.88
RCN1-201ENST00000054950 ARHGAP5Q13017 1502 aa26.77■■□□□ 1.88
RCN1-201ENST00000054950 TTC37Q6PGP7 1564 aa26.77■■□□□ 1.88
RCN1-201ENST00000054950 MS4A1P11836 297 aa26.76■■□□□ 1.87
RCN1-201ENST00000054950 NEFMP07197 916 aa26.74■■□□□ 1.87
RCN1-201ENST00000054950 ZMYM4Q5VZL5 1548 aa26.73■■□□□ 1.87
RCN1-201ENST00000054950 WASHC2CQ9Y4E1 1318 aa26.72■■□□□ 1.87
RCN1-201ENST00000054950 LAMC1P11047 1609 aa26.72■■□□□ 1.87
RCN1-201ENST00000054950 RSPH4AQ5TD94 716 aa26.71■■□□□ 1.87
RCN1-201ENST00000054950 PLEKHH1Q9ULM0 1364 aa26.7■■□□□ 1.87
RCN1-201ENST00000054950 MAGI2Q86UL8 1455 aa26.7■■□□□ 1.86
RCN1-201ENST00000054950 IQGAP3Q86VI3 1631 aa26.69■■□□□ 1.86
RCN1-201ENST00000054950 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.68■■□□□ 1.86
RCN1-201ENST00000054950 EIF2AK4Q9P2K8 1649 aaKnown RBP26.67■■□□□ 1.86
RCN1-201ENST00000054950 PPP2R1AP30153 589 aa26.66■■□□□ 1.86
RCN1-201ENST00000054950 MAST1Q9Y2H9 1570 aa26.65■■□□□ 1.86
RCN1-201ENST00000054950 SLC4A3P48751 1232 aa26.65■■□□□ 1.86
RCN1-201ENST00000054950 WDR7Q9Y4E6 1490 aa26.64■■□□□ 1.86
RCN1-201ENST00000054950 DUSP27Q5VZP5 1158 aa26.63■■□□□ 1.85
RCN1-201ENST00000054950 KNSTRNQ9Y448 316 aa26.63■■□□□ 1.85
RCN1-201ENST00000054950 WDR43Q15061 677 aaKnown RBP eCLIP26.63■■□□□ 1.85
RCN1-201ENST00000054950 INSRP06213 1382 aa26.62■■□□□ 1.85
RCN1-201ENST00000054950 KDM2BQ8NHM5 1336 aa26.62■■□□□ 1.85
RCN1-201ENST00000054950 IL27Q8NEV9 243 aa26.61■■□□□ 1.85
RCN1-201ENST00000054950 RNF17Q9BXT8 1623 aaKnown RBP26.61■■□□□ 1.85
RCN1-201ENST00000054950 CCDC146Q8IYE0 955 aa26.6■■□□□ 1.85
RCN1-201ENST00000054950 PLXNC1O60486 1568 aa26.6■■□□□ 1.85
RCN1-201ENST00000054950 AMER1Q5JTC6 1135 aaPredicted RBP26.59■■□□□ 1.85
RCN1-201ENST00000054950 DUOX2Q9NRD8 1548 aa26.56■■□□□ 1.84
RCN1-201ENST00000054950 ATP10AO60312 1499 aa26.55■■□□□ 1.84
RCN1-201ENST00000054950 RTN4Q9NQC3 1192 aaKnown RBP26.54■■□□□ 1.84
RCN1-201ENST00000054950 ZNF521Q96K83 1311 aa26.54■■□□□ 1.84
RCN1-201ENST00000054950 GOLGA2Q08379 1002 aa26.54■■□□□ 1.84
RCN1-201ENST00000054950 SPINK5Q9NQ38 1064 aaPredicted RBP26.53■■□□□ 1.84
RCN1-201ENST00000054950 MADDQ8WXG6 1647 aa26.53■■□□□ 1.84
RCN1-201ENST00000054950 PPM1GO15355 546 aaPredicted RBP26.52■■□□□ 1.84
RCN1-201ENST00000054950 ERCC6L2Q5T890 1561 aa26.52■■□□□ 1.84
RCN1-201ENST00000054950 IQGAP1P46940 1657 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms