RNA–Protein interactions for RNA: ENST00000016946.7

RGPD5-201, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD5, Length 7,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-201ENST00000016946 CHMP3Q9Y3E7 222 aa14.04□□□□□ -0.16
RGPD5-201ENST00000016946 TAF7LQ5H9L4 462 aa14.04□□□□□ -0.16
RGPD5-201ENST00000016946 PSME1Q06323 249 aa14.04□□□□□ -0.16
RGPD5-201ENST00000016946 GORABQ5T7V8 394 aa14.04□□□□□ -0.16
RGPD5-201ENST00000016946 RWDD1Q9H446 243 aaPredicted RBP14.04□□□□□ -0.16
RGPD5-201ENST00000016946 PHLDB1Q86UU1 1377 aa14.04□□□□□ -0.16
RGPD5-201ENST00000016946 TULP1O00294 542 aaPredicted RBP14.03□□□□□ -0.16
RGPD5-201ENST00000016946 DHX57Q6P158 1386 aaKnown RBP14.03□□□□□ -0.16
RGPD5-201ENST00000016946 HSP90AB1P08238 724 aaKnown RBP14.03□□□□□ -0.16
RGPD5-201ENST00000016946 C1orf141Q5JVX7 400 aa14.03□□□□□ -0.16
RGPD5-201ENST00000016946 ANKRD50Q9ULJ7 1429 aa14.03□□□□□ -0.16
RGPD5-201ENST00000016946 ATF3P18847 181 aa14.02□□□□□ -0.16
RGPD5-201ENST00000016946 HMMRO75330 724 aa14.02□□□□□ -0.16
RGPD5-201ENST00000016946 SLC4A10Q6U841 1118 aa14.02□□□□□ -0.17
RGPD5-201ENST00000016946 KIAA1211Q6ZU35 1233 aa14.02□□□□□ -0.17
RGPD5-201ENST00000016946 CENPJQ9HC77 1338 aaPredicted RBP14.01□□□□□ -0.17
RGPD5-201ENST00000016946 CASKIN1Q8WXD9 1431 aa14.01□□□□□ -0.17
RGPD5-201ENST00000016946 TEFQ10587 303 aa14.01□□□□□ -0.17
RGPD5-201ENST00000016946 CC2D2AQ9P2K1 1620 aa14□□□□□ -0.17
RGPD5-201ENST00000016946 USP47Q96K76 1375 aa14□□□□□ -0.17
RGPD5-201ENST00000016946 MYBBP1AQ9BQG0 1328 aaKnown RBP14□□□□□ -0.17
RGPD5-201ENST00000016946 PDE3BQ13370 1112 aa14□□□□□ -0.17
RGPD5-201ENST00000016946 MEX3CQ5U5Q3 659 aaKnown RBP13.98□□□□□ -0.17
RGPD5-201ENST00000016946 HMGXB3Q12766 1538 aa13.98□□□□□ -0.17
RGPD5-201ENST00000016946 TOPBP1Q92547 1522 aa13.98□□□□□ -0.17
RGPD5-201ENST00000016946 CLUAP1Q96AJ1 413 aa13.98□□□□□ -0.17
RGPD5-201ENST00000016946 CUX1P39880 1505 aa13.98□□□□□ -0.17
RGPD5-201ENST00000016946 G3V3G9 751 aa13.98□□□□□ -0.17
RGPD5-201ENST00000016946 DCAF8Q5TAQ9 597 aa13.98□□□□□ -0.17
RGPD5-201ENST00000016946 HSCBQ8IWL3 235 aa13.98□□□□□ -0.17
RGPD5-201ENST00000016946 RRP7AQ9Y3A4 280 aaKnown RBP13.98□□□□□ -0.17
RGPD5-201ENST00000016946 GOLGA6L4A6NEF3 574 aa13.97□□□□□ -0.17
RGPD5-201ENST00000016946 TTC5Q8N0Z6 440 aa13.97□□□□□ -0.17
RGPD5-201ENST00000016946 TXNDC2Q86VQ3 553 aa13.97□□□□□ -0.17
RGPD5-201ENST00000016946 FYCO1Q9BQS8 1478 aa13.97□□□□□ -0.17
RGPD5-201ENST00000016946 ARHGAP5Q13017 1502 aa13.96□□□□□ -0.17
RGPD5-201ENST00000016946 NCOA2Q15596 1464 aa13.96□□□□□ -0.17
RGPD5-201ENST00000016946 TRIM44Q96DX7 344 aaPredicted RBP13.96□□□□□ -0.17
RGPD5-201ENST00000016946 POLA1P09884 1462 aaPredicted RBP13.96□□□□□ -0.17
RGPD5-201ENST00000016946 GPATCH3Q96I76 525 aa13.95□□□□□ -0.18
RGPD5-201ENST00000016946 DNAJC5BQ9UF47 199 aa13.95□□□□□ -0.18
RGPD5-201ENST00000016946 PTMAP06454 111 aaKnown RBP13.95□□□□□ -0.18
RGPD5-201ENST00000016946 DIAPH1O60610 1272 aaKnown RBP13.95□□□□□ -0.18
RGPD5-201ENST00000016946 SNAPC4Q5SXM2 1469 aa13.95□□□□□ -0.18
RGPD5-201ENST00000016946 PMFBP1Q8TBY8 1022 aa13.94□□□□□ -0.18
RGPD5-201ENST00000016946 ELL2O00472 640 aaPredicted RBP13.94□□□□□ -0.18
RGPD5-201ENST00000016946 THEMISQ8N1K5 641 aaPredicted RBP13.94□□□□□ -0.18
RGPD5-201ENST00000016946 LRRC9Q6ZRR7 1453 aa13.94□□□□□ -0.18
RGPD5-201ENST00000016946 MSH5O43196 834 aa13.93□□□□□ -0.18
RGPD5-201ENST00000016946 PROSER2Q86WR7 435 aaPredicted RBP13.93□□□□□ -0.18
RGPD5-201ENST00000016946 FRAT2O75474 233 aaPredicted RBP13.93□□□□□ -0.18
RGPD5-201ENST00000016946 ERICH6BQ5W0A0 696 aa13.92□□□□□ -0.18
RGPD5-201ENST00000016946 TMEM132EQ6IEE7 984 aa13.92□□□□□ -0.18
RGPD5-201ENST00000016946 SCAPERQ9BY12 1400 aa13.92□□□□□ -0.18
RGPD5-201ENST00000016946 KIF21BO75037 1637 aa13.91□□□□□ -0.18
RGPD5-201ENST00000016946 GNL2Q13823 731 aaKnown RBP13.91□□□□□ -0.18
RGPD5-201ENST00000016946 RAPGEF4Q8WZA2 1011 aa13.91□□□□□ -0.18
RGPD5-201ENST00000016946 SYTL4Q96C24 671 aaPredicted RBP13.91□□□□□ -0.18
RGPD5-201ENST00000016946 RAPGEF3O95398 923 aa13.91□□□□□ -0.18
RGPD5-201ENST00000016946 PRKRIP1Q9H875 184 aaPredicted RBP13.91□□□□□ -0.18
RGPD5-201ENST00000016946 PLEKHH2Q8IVE3 1493 aa13.9□□□□□ -0.18
RGPD5-201ENST00000016946 NLRP6P59044 892 aa13.9□□□□□ -0.18
RGPD5-201ENST00000016946 NLRP2Q9NX02 1062 aa13.89□□□□□ -0.19
RGPD5-201ENST00000016946 PLCB2Q00722 1185 aa13.89□□□□□ -0.19
RGPD5-201ENST00000016946 NEXNQ0ZGT2 675 aa13.89□□□□□ -0.19
RGPD5-201ENST00000016946 TRIM6-TRIM34B2RNG4 842 aa13.88□□□□□ -0.19
RGPD5-201ENST00000016946 TROQ12816 1431 aaPredicted RBP13.88□□□□□ -0.19
RGPD5-201ENST00000016946 CFAP70Q5T0N1 1121 aa13.88□□□□□ -0.19
RGPD5-201ENST00000016946 SLC52A1Q9NWF4 448 aa13.88□□□□□ -0.19
RGPD5-201ENST00000016946 GPRASP1Q5JY77 1395 aa13.88□□□□□ -0.19
RGPD5-201ENST00000016946 MIA2Q96PC5 1412 aa13.88□□□□□ -0.19
RGPD5-201ENST00000016946 E9PSI1 815 aa13.88□□□□□ -0.19
RGPD5-201ENST00000016946 ERICH3Q5RHP9 1530 aa13.87□□□□□ -0.19
RGPD5-201ENST00000016946 CABP2Q9NPB3 220 aa13.87□□□□□ -0.19
RGPD5-201ENST00000016946 EIF2S2P20042 333 aaKnown RBP13.87□□□□□ -0.19
RGPD5-201ENST00000016946 GGNBP2Q9H3C7 697 aa13.86□□□□□ -0.19
RGPD5-201ENST00000016946 POGZQ7Z3K3 1410 aa13.86□□□□□ -0.19
RGPD5-201ENST00000016946 APAF1O14727 1248 aa13.86□□□□□ -0.19
RGPD5-201ENST00000016946 ESCO1Q5FWF5 840 aa13.86□□□□□ -0.19
RGPD5-201ENST00000016946 NUTM2GQ5VZR2 741 aa13.86□□□□□ -0.19
RGPD5-201ENST00000016946 NGEFQ8N5V2 710 aa13.85□□□□□ -0.19
RGPD5-201ENST00000016946 KIAA0586Q9BVV6 1533 aa13.85□□□□□ -0.19
RGPD5-201ENST00000016946 GOLGA6L6A8MZA4 724 aa13.85□□□□□ -0.19
RGPD5-201ENST00000016946 PRDM2Q13029 1718 aa13.85□□□□□ -0.19
RGPD5-201ENST00000016946 ARAP1Q96P48 1450 aa13.85□□□□□ -0.19
RGPD5-201ENST00000016946 RIPK4P57078 832 aa13.84□□□□□ -0.19
RGPD5-201ENST00000016946 ZKSCAN2Q63HK3 967 aa13.84□□□□□ -0.19
RGPD5-201ENST00000016946 BCL2L13Q9BXK5 485 aa13.84□□□□□ -0.19
RGPD5-201ENST00000016946 PRXQ9BXM0 1461 aa13.84□□□□□ -0.19
RGPD5-201ENST00000016946 ANKLE2Q86XL3 938 aa13.84□□□□□ -0.19
RGPD5-201ENST00000016946 RRBP1Q9P2E9 1410 aaKnown RBP13.84□□□□□ -0.19
RGPD5-201ENST00000016946 NRDCO43847 1150 aa13.84□□□□□ -0.19
RGPD5-201ENST00000016946 SYNJ1O43426 1573 aa13.83□□□□□ -0.2
RGPD5-201ENST00000016946 TOMM22Q9NS69 142 aa13.83□□□□□ -0.2
RGPD5-201ENST00000016946 EFCAB5A4FU69 1503 aa13.83□□□□□ -0.2
RGPD5-201ENST00000016946 HFM1A2PYH4 1435 aa13.83□□□□□ -0.2
RGPD5-201ENST00000016946 CLSTN1O94985 981 aa13.82□□□□□ -0.2
RGPD5-201ENST00000016946 C9orf84Q5VXU9 1444 aa13.82□□□□□ -0.2
RGPD5-201ENST00000016946 NOP58Q9Y2X3 529 aaKnown RBP13.82□□□□□ -0.2
RGPD5-201ENST00000016946 TCERG1O14776 1098 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms