RNA–Protein interactions for RNA: ENST00000002596.5

HS3ST1-201, Transcript of heparan sulfate-glucosamine 3-sulfotransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HS3ST1, Length 8,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST1-201ENST00000002596 CT47A1Q5JQC4 288 aaPredicted RBP15.3■□□□□ 0.04
HS3ST1-201ENST00000002596 GOLGA6L3A6NEY3 463 aa15.3■□□□□ 0.04
HS3ST1-201ENST00000002596 HSP90AA2PQ14568 343 aaPredicted RBP15.3■□□□□ 0.04
HS3ST1-201ENST00000002596 WDR70Q9NW82 654 aa15.3■□□□□ 0.04
HS3ST1-201ENST00000002596 GTF2E1P29083 439 aaPredicted RBP15.29■□□□□ 0.04
HS3ST1-201ENST00000002596 ITPRIPQ8IWB1 547 aa15.29■□□□□ 0.04
HS3ST1-201ENST00000002596 GPS2Q13227 327 aa15.28■□□□□ 0.04
HS3ST1-201ENST00000002596 STK11IPQ8N1F8 1099 aa15.28■□□□□ 0.04
HS3ST1-201ENST00000002596 KIF3AQ9Y496 699 aa15.28■□□□□ 0.04
HS3ST1-201ENST00000002596 STK31Q9BXU1 1019 aa15.28■□□□□ 0.04
HS3ST1-201ENST00000002596 HMMRO75330 724 aa15.28■□□□□ 0.04
HS3ST1-201ENST00000002596 BCCIPQ9P287 314 aaKnown RBP eCLIP15.27■□□□□ 0.04
HS3ST1-201ENST00000002596 FBXW7Q969H0 707 aa15.27■□□□□ 0.04
HS3ST1-201ENST00000002596 PHF14O94880 888 aa15.27■□□□□ 0.04
HS3ST1-201ENST00000002596 MFAP1P55081 439 aaKnown RBP15.27■□□□□ 0.04
HS3ST1-201ENST00000002596 HSP90AB3PQ58FF7 597 aa15.27■□□□□ 0.04
HS3ST1-201ENST00000002596 FHAD1B1AJZ9 1412 aa15.27■□□□□ 0.03
HS3ST1-201ENST00000002596 TRIM34Q9BYJ4 488 aa15.27■□□□□ 0.03
HS3ST1-201ENST00000002596 HSP90AB2PQ58FF8 381 aa15.27■□□□□ 0.03
HS3ST1-201ENST00000002596 RBM19Q9Y4C8 960 aaKnown RBP15.27■□□□□ 0.03
HS3ST1-201ENST00000002596 DCAF11Q8TEB1 546 aa15.26■□□□□ 0.03
HS3ST1-201ENST00000002596 EIF3AQ14152 1382 aaKnown RBP15.26■□□□□ 0.03
HS3ST1-201ENST00000002596 RUFY1Q96T51 708 aa15.26■□□□□ 0.03
HS3ST1-201ENST00000002596 STK26Q9P289 416 aa15.25■□□□□ 0.03
HS3ST1-201ENST00000002596 HOMER1Q86YM7 354 aa15.25■□□□□ 0.03
HS3ST1-201ENST00000002596 CCDC191Q8NCU4 936 aa15.24■□□□□ 0.03
HS3ST1-201ENST00000002596 TPM1P09493 284 aa15.24■□□□□ 0.03
HS3ST1-201ENST00000002596 ANKRD62A6NC57 917 aa15.23■□□□□ 0.03
HS3ST1-201ENST00000002596 AMOTL1Q8IY63 956 aa15.23■□□□□ 0.03
HS3ST1-201ENST00000002596 EID1Q9Y6B2 187 aa15.23■□□□□ 0.03
HS3ST1-201ENST00000002596 CCDC43Q96MW1 224 aaKnown RBP15.22■□□□□ 0.03
HS3ST1-201ENST00000002596 H3BQV1 296 aa15.22■□□□□ 0.03
HS3ST1-201ENST00000002596 IFFO2Q5TF58 517 aa15.22■□□□□ 0.03
HS3ST1-201ENST00000002596 KTN1Q86UP2 1357 aaKnown RBP15.22■□□□□ 0.03
HS3ST1-201ENST00000002596 NOL10Q9BSC4 688 aaKnown RBP15.21■□□□□ 0.03
HS3ST1-201ENST00000002596 CHMP4CQ96CF2 233 aa15.21■□□□□ 0.03
HS3ST1-201ENST00000002596 GOLGA6L19H0YKK7 550 aa15.21■□□□□ 0.03
HS3ST1-201ENST00000002596 DCAF8L1A6NGE4 600 aa15.21■□□□□ 0.03
HS3ST1-201ENST00000002596 CEP164Q9UPV0 1460 aa15.21■□□□□ 0.02
HS3ST1-201ENST00000002596 SIN3AQ96ST3 1273 aa15.2■□□□□ 0.02
HS3ST1-201ENST00000002596 DHX16O60231 1041 aaKnown RBP15.2■□□□□ 0.02
HS3ST1-201ENST00000002596 AKAP17AQ02040 695 aaKnown RBP15.2■□□□□ 0.02
HS3ST1-201ENST00000002596 KIF16BQ96L93 1317 aa15.2■□□□□ 0.02
HS3ST1-201ENST00000002596 RWDD1Q9H446 243 aaPredicted RBP15.19■□□□□ 0.02
HS3ST1-201ENST00000002596 TEX35Q5T0J7 233 aa15.19■□□□□ 0.02
HS3ST1-201ENST00000002596 H0YHG0 523 aa15.19■□□□□ 0.02
HS3ST1-201ENST00000002596 MCTP1Q6DN14 999 aa15.19■□□□□ 0.02
HS3ST1-201ENST00000002596 CEP162Q5TB80 1403 aa15.18■□□□□ 0.02
HS3ST1-201ENST00000002596 NEFHP12036 1026 aa15.18■□□□□ 0.02
HS3ST1-201ENST00000002596 LRRFIP1Q32MZ4 808 aaKnown RBP15.18■□□□□ 0.02
HS3ST1-201ENST00000002596 TMEM132AQ24JP5 1023 aa15.17■□□□□ 0.02
HS3ST1-201ENST00000002596 R3HCC1Q9Y3T6 440 aaKnown RBP15.17■□□□□ 0.02
HS3ST1-201ENST00000002596 RDXP35241 583 aaKnown RBP15.17■□□□□ 0.02
HS3ST1-201ENST00000002596 PMFBP1Q8TBY8 1022 aa15.17■□□□□ 0.02
HS3ST1-201ENST00000002596 SLC4A10Q6U841 1118 aa15.17■□□□□ 0.02
HS3ST1-201ENST00000002596 TIMELESSQ9UNS1 1208 aa15.17■□□□□ 0.02
HS3ST1-201ENST00000002596 LMOD3Q0VAK6 560 aa15.16■□□□□ 0.02
HS3ST1-201ENST00000002596 GGT6Q6P531 493 aa15.16■□□□□ 0.02
HS3ST1-201ENST00000002596 TTLL5Q6EMB2 1281 aa15.16■□□□□ 0.02
HS3ST1-201ENST00000002596 IPO7O95373 1038 aaKnown RBP15.16■□□□□ 0.02
HS3ST1-201ENST00000002596 ROCK2O75116 1388 aaKnown RBP15.15■□□□□ 0.02
HS3ST1-201ENST00000002596 U2AF1L5P0DN76 240 aaPredicted RBP15.15■□□□□ 0.02
HS3ST1-201ENST00000002596 U2AF1Q01081 240 aaKnown RBP eCLIP15.15■□□□□ 0.02
HS3ST1-201ENST00000002596 BECN2A8MW95 431 aa15.15■□□□□ 0.02
HS3ST1-201ENST00000002596 EVA1CP58658 441 aa15.14■□□□□ 0.01
HS3ST1-201ENST00000002596 NACADO15069 1562 aa15.14■□□□□ 0.01
HS3ST1-201ENST00000002596 NOM1Q5C9Z4 860 aaKnown RBP15.14■□□□□ 0.01
HS3ST1-201ENST00000002596 TERF2IPQ9NYB0 399 aa15.14■□□□□ 0.01
HS3ST1-201ENST00000002596 CCAR1Q8IX12 1150 aaKnown RBP15.14■□□□□ 0.01
HS3ST1-201ENST00000002596 RCAN3Q9UKA8 241 aa15.13■□□□□ 0.01
HS3ST1-201ENST00000002596 IBSPP21815 317 aaPredicted RBP15.13■□□□□ 0.01
HS3ST1-201ENST00000002596 AMPHP49418 695 aa15.13■□□□□ 0.01
HS3ST1-201ENST00000002596 FAM184AQ8NB25 1140 aa15.13■□□□□ 0.01
HS3ST1-201ENST00000002596 NGDNQ8NEJ9 315 aaKnown RBP15.13■□□□□ 0.01
HS3ST1-201ENST00000002596 CARMIL2Q6F5E8 1435 aa15.13■□□□□ 0.01
HS3ST1-201ENST00000002596 FOSBP53539 338 aa15.12■□□□□ 0.01
HS3ST1-201ENST00000002596 PHF23Q9BUL5 403 aaPredicted RBP15.12■□□□□ 0.01
HS3ST1-201ENST00000002596 ST18O60284 1047 aa15.12■□□□□ 0.01
HS3ST1-201ENST00000002596 ARHGAP35Q9NRY4 1499 aa15.12■□□□□ 0.01
HS3ST1-201ENST00000002596 EPS15P42566 896 aa15.12■□□□□ 0.01
HS3ST1-201ENST00000002596 SYNE3Q6ZMZ3 975 aa15.12■□□□□ 0.01
HS3ST1-201ENST00000002596 SEPT11Q9NVA2 429 aaKnown RBP15.12■□□□□ 0.01
HS3ST1-201ENST00000002596 TCERG1O14776 1098 aaKnown RBP15.11■□□□□ 0.01
HS3ST1-201ENST00000002596 HMGN5P82970 282 aaKnown RBP15.11■□□□□ 0.01
HS3ST1-201ENST00000002596 SMC4Q9NTJ3 1288 aa15.11■□□□□ 0.01
HS3ST1-201ENST00000002596 WRNQ14191 1432 aaPredicted RBP eCLIP15.11■□□□□ 0.01
HS3ST1-201ENST00000002596 CDR1P51861 262 aa15.1■□□□□ 0.01
HS3ST1-201ENST00000002596 FAM13BQ9NYF5 915 aa15.09■□□□□ 0.01
HS3ST1-201ENST00000002596 SLC4A3P48751 1232 aa15.09■□□□□ 0.01
HS3ST1-201ENST00000002596 ZRSR2Q15696 482 aaKnown RBP15.09■□□□□ 0.01
HS3ST1-201ENST00000002596 CCDC47Q96A33 483 aaKnown RBP15.09■□□□□ 0.01
HS3ST1-201ENST00000002596 MAPK8IP2Q13387 824 aaPredicted RBP15.08■□□□□ 0
HS3ST1-201ENST00000002596 ENOX2Q16206 610 aaKnown RBP15.08■□□□□ 0
HS3ST1-201ENST00000002596 C1orf141Q5JVX7 400 aa15.07■□□□□ 0
HS3ST1-201ENST00000002596 CAGE1Q8TC20 777 aa15.07■□□□□ 0
HS3ST1-201ENST00000002596 DCTN1Q14203 1278 aa15.07■□□□□ 0
HS3ST1-201ENST00000002596 CLASRPQ8N2M8 674 aaKnown RBP15.07■□□□□ 0
HS3ST1-201ENST00000002596 MTMR7Q9Y216 660 aa15.07■□□□□ 0
HS3ST1-201ENST00000002596 VPS37DQ86XT2 251 aa15.07■□□□□ 0
HS3ST1-201ENST00000002596 KDM4AO75164 1064 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms