RNA–Protein interactions for RNA: ENSMUST00000219577.1

Herc4-208, Transcript of Probable E3 ubiquitin-protein ligase HERC4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Herc4, Length 3,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4-208ENSMUST00000219577 Sall3Q62255 1320 aa15.97■□□□□ 0.15
Herc4-208ENSMUST00000219577 Abca5Q8K448 1642 aa15.96■□□□□ 0.15
Herc4-208ENSMUST00000219577 Spag9Q58A65 1321 aaKnown RBP15.96■□□□□ 0.15
Herc4-208ENSMUST00000219577 Fan1Q69ZT1 1020 aa15.96■□□□□ 0.14
Herc4-208ENSMUST00000219577 Tcerg1Q8CGF7 1100 aaKnown RBP15.96■□□□□ 0.14
Herc4-208ENSMUST00000219577 Pik3c2gO70167 1506 aa15.95■□□□□ 0.14
Herc4-208ENSMUST00000219577 Armcx1Q9CX83 456 aa15.95■□□□□ 0.14
Herc4-208ENSMUST00000219577 Liat1Q810M6 228 aa15.95■□□□□ 0.14
Herc4-208ENSMUST00000219577 Shroom2A2ALU4 1481 aa15.95■□□□□ 0.14
Herc4-208ENSMUST00000219577 Prex2Q3LAC4 1598 aa15.94■□□□□ 0.14
Herc4-208ENSMUST00000219577 Srpk2O54781 681 aaKnown RBP15.94■□□□□ 0.14
Herc4-208ENSMUST00000219577 Adcy10Q8C0T9 1614 aa15.94■□□□□ 0.14
Herc4-208ENSMUST00000219577 Ccdc141E9Q8Q6 1531 aa15.94■□□□□ 0.14
Herc4-208ENSMUST00000219577 Dcaf11Q91VU6 549 aa15.94■□□□□ 0.14
Herc4-208ENSMUST00000219577 Pde4cQ3UEI1 686 aa15.93■□□□□ 0.14
Herc4-208ENSMUST00000219577 Speer4f1Q9D5Q6 258 aa15.93■□□□□ 0.14
Herc4-208ENSMUST00000219577 Camsap2Q8C1B1 1461 aa15.93■□□□□ 0.14
Herc4-208ENSMUST00000219577 Myom3A2ABU4 1439 aa15.93■□□□□ 0.14
Herc4-208ENSMUST00000219577 Cd109Q8R422 1442 aa15.92■□□□□ 0.14
Herc4-208ENSMUST00000219577 Tmf1B9EKI3 1091 aa15.92■□□□□ 0.14
Herc4-208ENSMUST00000219577 Rapgef6Q5NCJ1 1609 aa15.92■□□□□ 0.14
Herc4-208ENSMUST00000219577 Zscan10Q3URR7 782 aa15.91■□□□□ 0.14
Herc4-208ENSMUST00000219577 Mug2P28666 1451 aa15.91■□□□□ 0.14
Herc4-208ENSMUST00000219577 Cdk13Q69ZA1 1511 aaKnown RBP15.91■□□□□ 0.14
Herc4-208ENSMUST00000219577 SphkapQ6NSW3 1687 aa15.91■□□□□ 0.14
Herc4-208ENSMUST00000219577 Wdr7Q920I9 1489 aa15.9■□□□□ 0.14
Herc4-208ENSMUST00000219577 Upf2A2AT37 1269 aaKnown RBP15.89■□□□□ 0.14
Herc4-208ENSMUST00000219577 4930567H17RikQ3V0K5 233 aa15.89■□□□□ 0.14
Herc4-208ENSMUST00000219577 AlkP97793 1621 aa15.89■□□□□ 0.13
Herc4-208ENSMUST00000219577 Trappc8E9PWG2 1437 aa15.89■□□□□ 0.13
Herc4-208ENSMUST00000219577 Senp3Q9EP97 568 aaKnown RBP15.88■□□□□ 0.13
Herc4-208ENSMUST00000219577 Kdm3bQ6ZPY7 1562 aa15.88■□□□□ 0.13
Herc4-208ENSMUST00000219577 Arhgap5P97393 1501 aa15.88■□□□□ 0.13
Herc4-208ENSMUST00000219577 CanxP35564 591 aaKnown RBP15.88■□□□□ 0.13
Herc4-208ENSMUST00000219577 Amer1Q7TS75 1132 aa15.88■□□□□ 0.13
Herc4-208ENSMUST00000219577 Adamts12Q811B3 1600 aa15.87■□□□□ 0.13
Herc4-208ENSMUST00000219577 Plppr3Q7TPB0 716 aa15.87■□□□□ 0.13
Herc4-208ENSMUST00000219577 Gcc2Q8CHG3 1679 aa15.85■□□□□ 0.13
Herc4-208ENSMUST00000219577 Trim30dE9PWL0 497 aa15.85■□□□□ 0.13
Herc4-208ENSMUST00000219577 PrxO55103 1391 aa15.85■□□□□ 0.13
Herc4-208ENSMUST00000219577 Stk26Q99JT2 416 aa15.85■□□□□ 0.13
Herc4-208ENSMUST00000219577 Gtf2e1Q9D0D5 440 aa15.85■□□□□ 0.13
Herc4-208ENSMUST00000219577 Stag3O70576 1240 aa15.83■□□□□ 0.12
Herc4-208ENSMUST00000219577 Nup160Q9Z0W3 1402 aaKnown RBP15.83■□□□□ 0.12
Herc4-208ENSMUST00000219577 Fam184bQ0KK56 942 aa15.82■□□□□ 0.12
Herc4-208ENSMUST00000219577 Rwdd1Q9CQK7 243 aa15.82■□□□□ 0.12
Herc4-208ENSMUST00000219577 Pprc1Q6NZN1 1644 aa15.82■□□□□ 0.12
Herc4-208ENSMUST00000219577 Erbb3Q61526 1339 aa15.82■□□□□ 0.12
Herc4-208ENSMUST00000219577 Usp40Q8BWR4 1235 aa15.81■□□□□ 0.12
Herc4-208ENSMUST00000219577 Rock1P70335 1354 aa15.81■□□□□ 0.12
Herc4-208ENSMUST00000219577 Kif7B7ZNG0 1348 aa15.81■□□□□ 0.12
Herc4-208ENSMUST00000219577 Cul7Q8VE73 1689 aa15.81■□□□□ 0.12
Herc4-208ENSMUST00000219577 Chmp5Q9D7S9 219 aa15.8■□□□□ 0.12
Herc4-208ENSMUST00000219577 Abca16E9PWJ7 1678 aa15.8■□□□□ 0.12
Herc4-208ENSMUST00000219577 Ssh2Q5SW75 1423 aa15.8■□□□□ 0.12
Herc4-208ENSMUST00000219577 Ppp2r1aQ76MZ3 589 aa15.8■□□□□ 0.12
Herc4-208ENSMUST00000219577 Arhgef11Q68FM7 1552 aa15.79■□□□□ 0.12
Herc4-208ENSMUST00000219577 Kif14L0N7N1 1674 aaKnown RBP15.79■□□□□ 0.12
Herc4-208ENSMUST00000219577 Ipo9Q91YE6 1041 aa15.79■□□□□ 0.12
Herc4-208ENSMUST00000219577 Egfem1Q8C088 590 aa15.79■□□□□ 0.12
Herc4-208ENSMUST00000219577 Lemd3Q9WU40 921 aa15.79■□□□□ 0.12
Herc4-208ENSMUST00000219577 Atp7aQ64430 1491 aa15.78■□□□□ 0.12
Herc4-208ENSMUST00000219577 Ccdc27Q3V036 639 aa15.77■□□□□ 0.12
Herc4-208ENSMUST00000219577 Naip6Q9JIB6 1403 aa15.76■□□□□ 0.11
Herc4-208ENSMUST00000219577 Ttll13A4Q9F6 804 aa15.76■□□□□ 0.11
Herc4-208ENSMUST00000219577 Golga2Q921M4 999 aa15.76■□□□□ 0.11
Herc4-208ENSMUST00000219577 Kif16bB1AVY7 1312 aa15.76■□□□□ 0.11
Herc4-208ENSMUST00000219577 Fgd6Q69ZL1 1399 aa15.75■□□□□ 0.11
Herc4-208ENSMUST00000219577 Polr3aB2RXC6 1390 aa15.75■□□□□ 0.11
Herc4-208ENSMUST00000219577 Supt6hQ62383 1726 aaKnown RBP15.75■□□□□ 0.11
Herc4-208ENSMUST00000219577 Mlh3A0A1Y7VMP7 1443 aa15.75■□□□□ 0.11
Herc4-208ENSMUST00000219577 Exosc9Q9JHI7 438 aaKnown RBP15.73■□□□□ 0.11
Herc4-208ENSMUST00000219577 Gm14025A2AP89 1413 aa15.73■□□□□ 0.11
Herc4-208ENSMUST00000219577 Abcc2Q8VI47 1543 aa15.73■□□□□ 0.11
Herc4-208ENSMUST00000219577 Arid4bA2CG63 1314 aaKnown RBP15.72■□□□□ 0.11
Herc4-208ENSMUST00000219577 Hdac5Q9Z2V6 1113 aa15.72■□□□□ 0.11
Herc4-208ENSMUST00000219577 RalgapbQ8BQZ4 1484 aa15.71■□□□□ 0.11
Herc4-208ENSMUST00000219577 Arhgef12Q8R4H2 1543 aaKnown RBP15.7■□□□□ 0.1
Herc4-208ENSMUST00000219577 Ccdc30Q8BVF4 654 aa15.7■□□□□ 0.1
Herc4-208ENSMUST00000219577 Pank1Q8K4K6 548 aa15.7■□□□□ 0.1
Herc4-208ENSMUST00000219577 Znf330Q922H9 316 aa15.7■□□□□ 0.1
Herc4-208ENSMUST00000219577 Cluap1Q8R3P7 413 aa15.7■□□□□ 0.1
Herc4-208ENSMUST00000219577 Plin1Q8CGN5 517 aa15.7■□□□□ 0.1
Herc4-208ENSMUST00000219577 U2af1Q9D883 239 aaKnown RBP15.7■□□□□ 0.1
Herc4-208ENSMUST00000219577 Asxl1P59598 1514 aa15.7■□□□□ 0.1
Herc4-208ENSMUST00000219577 Hsp90ab1P11499 724 aaKnown RBP15.69■□□□□ 0.1
Herc4-208ENSMUST00000219577 Hsp90aa1P07901 733 aaKnown RBP15.68■□□□□ 0.1
Herc4-208ENSMUST00000219577 Zranb1Q7M760 708 aa15.68■□□□□ 0.1
Herc4-208ENSMUST00000219577 Prkrip1Q9CWV6 186 aaKnown RBP15.68■□□□□ 0.1
Herc4-208ENSMUST00000219577 Fhod3Q76LL6 1578 aa15.68■□□□□ 0.1
Herc4-208ENSMUST00000219577 Setbp1Q9Z180 1582 aa15.68■□□□□ 0.1
Herc4-208ENSMUST00000219577 Tspyl2Q7TQI8 677 aa15.67■□□□□ 0.1
Herc4-208ENSMUST00000219577 Fancd2Q80V62 1450 aa15.67■□□□□ 0.1
Herc4-208ENSMUST00000219577 Kiaa1551Q5DTW7 1521 aa15.67■□□□□ 0.1
Herc4-208ENSMUST00000219577 PrkcshO08795 521 aa15.67■□□□□ 0.1
Herc4-208ENSMUST00000219577 Mroh2aD3Z750 1679 aa15.66■□□□□ 0.1
Herc4-208ENSMUST00000219577 Apaf1O88879 1249 aa15.66■□□□□ 0.1
Herc4-208ENSMUST00000219577 Znf316Q6PGE4 1016 aa15.66■□□□□ 0.1
Herc4-208ENSMUST00000219577 IqubQ8CDK3 788 aa15.66■□□□□ 0.1
Herc4-208ENSMUST00000219577 Setd1bQ8CFT2 1985 aa15.66■□□□□ 0.1
Retrieved 100 of 22,080 RNA–protein pairs in 15 ms