RNA–Protein interactions for RNA: ENSMUST00000210061.1

Clcn4-203, Transcript of H(+)/Cl(-) exchange transporter 4, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Clcn4, Length 2,445 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4-203ENSMUST00000210061 Map4P27546 1125 aaKnown RBP18.12■□□□□ 0.49
Clcn4-203ENSMUST00000210061 Asxl1P59598 1514 aa18.12■□□□□ 0.49
Clcn4-203ENSMUST00000210061 Upf2A2AT37 1269 aaKnown RBP18.12■□□□□ 0.49
Clcn4-203ENSMUST00000210061 Zscan21Q07231 555 aa18.11■□□□□ 0.49
Clcn4-203ENSMUST00000210061 Anp32bQ9EST5 272 aaKnown RBP18.11■□□□□ 0.49
Clcn4-203ENSMUST00000210061 Caskin1Q6P9K8 1431 aa18.1■□□□□ 0.49
Clcn4-203ENSMUST00000210061 Zfp444Q3TDV8 331 aaKnown RBP18.1■□□□□ 0.49
Clcn4-203ENSMUST00000210061 Prex2Q3LAC4 1598 aa18.09■□□□□ 0.49
Clcn4-203ENSMUST00000210061 Mak16Q8BGS0 296 aaKnown RBP18.09■□□□□ 0.49
Clcn4-203ENSMUST00000210061 Iqgap1Q9JKF1 1657 aaKnown RBP18.09■□□□□ 0.49
Clcn4-203ENSMUST00000210061 Dot1lQ6XZL8 1540 aa18.08■□□□□ 0.49
Clcn4-203ENSMUST00000210061 Gapvd1Q6PAR5 1458 aa18.08■□□□□ 0.49
Clcn4-203ENSMUST00000210061 Rock1P70335 1354 aa18.08■□□□□ 0.48
Clcn4-203ENSMUST00000210061 Ttbk1Q6PCN3 1308 aa18.08■□□□□ 0.48
Clcn4-203ENSMUST00000210061 Mroh2aD3Z750 1679 aa18.07■□□□□ 0.48
Clcn4-203ENSMUST00000210061 PrkcshO08795 521 aa18.07■□□□□ 0.48
Clcn4-203ENSMUST00000210061 NeflP08551 543 aa18.06■□□□□ 0.48
Clcn4-203ENSMUST00000210061 Prkrip1Q9CWV6 186 aaKnown RBP18.06■□□□□ 0.48
Clcn4-203ENSMUST00000210061 PtprgQ05909 1442 aa18.06■□□□□ 0.48
Clcn4-203ENSMUST00000210061 Fmn2Q9JL04 1578 aa18.05■□□□□ 0.48
Clcn4-203ENSMUST00000210061 TnikP83510 1323 aa18.03■□□□□ 0.48
Clcn4-203ENSMUST00000210061 Q7TT23 1179 aa18.02■□□□□ 0.48
Clcn4-203ENSMUST00000210061 Kdm5cP41230 1554 aa18.02■□□□□ 0.48
Clcn4-203ENSMUST00000210061 Tubgcp6G5E8P0 1769 aa18.01■□□□□ 0.47
Clcn4-203ENSMUST00000210061 Setd1aE9PYH6 1716 aa18.01■□□□□ 0.47
Clcn4-203ENSMUST00000210061 Lrrc9Q8CDN9 1456 aa18■□□□□ 0.47
Clcn4-203ENSMUST00000210061 Adgrl2Q8JZZ7 1487 aa18■□□□□ 0.47
Clcn4-203ENSMUST00000210061 Zmym4A2A791 1549 aaKnown RBP18■□□□□ 0.47
Clcn4-203ENSMUST00000210061 Clstn2Q9ER65 966 aa17.99■□□□□ 0.47
Clcn4-203ENSMUST00000210061 Ccdc9Q8VC31 543 aaKnown RBP17.98■□□□□ 0.47
Clcn4-203ENSMUST00000210061 Eif4g3Q80XI3 1579 aaKnown RBP17.97■□□□□ 0.47
Clcn4-203ENSMUST00000210061 Ssh2Q5SW75 1423 aa17.97■□□□□ 0.47
Clcn4-203ENSMUST00000210061 Rad21Q61550 635 aaKnown RBP17.97■□□□□ 0.47
Clcn4-203ENSMUST00000210061 Tarbp1E9Q368 1579 aa17.95■□□□□ 0.46
Clcn4-203ENSMUST00000210061 Hsp90aa1P07901 733 aaKnown RBP17.94■□□□□ 0.46
Clcn4-203ENSMUST00000210061 Zbtb4Q5F293 982 aa17.94■□□□□ 0.46
Clcn4-203ENSMUST00000210061 Pank3Q8R2W9 370 aa17.94■□□□□ 0.46
Clcn4-203ENSMUST00000210061 Iqcf3Q9D498 203 aa17.94■□□□□ 0.46
Clcn4-203ENSMUST00000210061 PrxO55103 1391 aa17.94■□□□□ 0.46
Clcn4-203ENSMUST00000210061 Cd109Q8R422 1442 aa17.93■□□□□ 0.46
Clcn4-203ENSMUST00000210061 Zcchc11B2RX14 1644 aaKnown RBP17.93■□□□□ 0.46
Clcn4-203ENSMUST00000210061 Atp7aQ64430 1491 aa17.92■□□□□ 0.46
Clcn4-203ENSMUST00000210061 Zbtb7cQ8VCZ7 619 aa17.92■□□□□ 0.46
Clcn4-203ENSMUST00000210061 Rrp7aQ9D1C9 280 aaKnown RBP17.92■□□□□ 0.46
Clcn4-203ENSMUST00000210061 Arid4bA2CG63 1314 aaKnown RBP17.92■□□□□ 0.46
Clcn4-203ENSMUST00000210061 Plch2A2AP18 1501 aa17.91■□□□□ 0.46
Clcn4-203ENSMUST00000210061 Ttll13A4Q9F6 804 aa17.91■□□□□ 0.46
Clcn4-203ENSMUST00000210061 ChgaP26339 463 aaKnown RBP17.91■□□□□ 0.46
Clcn4-203ENSMUST00000210061 Inpp5dQ9ES52 1191 aa17.91■□□□□ 0.46
Clcn4-203ENSMUST00000210061 Mbd3Q9Z2D8 285 aaKnown RBP17.9■□□□□ 0.46
Clcn4-203ENSMUST00000210061 Tex14Q7M6U3 1450 aa17.9■□□□□ 0.46
Clcn4-203ENSMUST00000210061 Hdac5Q9Z2V6 1113 aa17.9■□□□□ 0.46
Clcn4-203ENSMUST00000210061 Ttc41Q692V3 1318 aa17.89■□□□□ 0.46
Clcn4-203ENSMUST00000210061 Fam208aQ69ZR9 1610 aaKnown RBP17.89■□□□□ 0.45
Clcn4-203ENSMUST00000210061 Fancd2Q80V62 1450 aa17.89■□□□□ 0.45
Clcn4-203ENSMUST00000210061 Ifit1bl1D3Z6F0 470 aa17.89■□□□□ 0.45
Clcn4-203ENSMUST00000210061 Ppip5k1A2ARP1 1436 aa17.89■□□□□ 0.45
Clcn4-203ENSMUST00000210061 Zscan10Q3URR7 782 aa17.88■□□□□ 0.45
Clcn4-203ENSMUST00000210061 Fkbp15Q6P9Q6 1216 aaKnown RBP17.87■□□□□ 0.45
Clcn4-203ENSMUST00000210061 Jph4Q80WT0 628 aa17.87■□□□□ 0.45
Clcn4-203ENSMUST00000210061 Tmf1B9EKI3 1091 aa17.86■□□□□ 0.45
Clcn4-203ENSMUST00000210061 Esx1O88933 382 aa17.86■□□□□ 0.45
Clcn4-203ENSMUST00000210061 Ak9G3UYQ4 1894 aa17.85■□□□□ 0.45
Clcn4-203ENSMUST00000210061 Mast1Q9R1L5 1570 aa17.85■□□□□ 0.45
Clcn4-203ENSMUST00000210061 Kif16bB1AVY7 1312 aa17.84■□□□□ 0.45
Clcn4-203ENSMUST00000210061 Adamts13Q769J6 1426 aa17.84■□□□□ 0.45
Clcn4-203ENSMUST00000210061 Rrbp1Q99PL5 1605 aaKnown RBP17.84■□□□□ 0.45
Clcn4-203ENSMUST00000210061 Neo1P97798 1493 aa17.83■□□□□ 0.45
Clcn4-203ENSMUST00000210061 Dnmt1P13864 1620 aaKnown RBP17.83■□□□□ 0.45
Clcn4-203ENSMUST00000210061 Gm32742A0A1B0GT42 1604 aa17.83■□□□□ 0.44
Clcn4-203ENSMUST00000210061 Trappc8E9PWG2 1437 aa17.82■□□□□ 0.44
Clcn4-203ENSMUST00000210061 Sbno1Q689Z5 1390 aa17.82■□□□□ 0.44
Clcn4-203ENSMUST00000210061 Arhgap5P97393 1501 aa17.82■□□□□ 0.44
Clcn4-203ENSMUST00000210061 Neurl4Q5NCX5 1563 aa17.82■□□□□ 0.44
Clcn4-203ENSMUST00000210061 Kdm2bQ6P1G2 1309 aa17.81■□□□□ 0.44
Clcn4-203ENSMUST00000210061 Sart1Q9Z315 806 aaKnown RBP17.81■□□□□ 0.44
Clcn4-203ENSMUST00000210061 Clasp1Q80TV8 1535 aaKnown RBP17.81■□□□□ 0.44
Clcn4-203ENSMUST00000210061 Nkx1-2P42580 305 aa17.8■□□□□ 0.44
Clcn4-203ENSMUST00000210061 CrbnQ8C7D2 445 aa17.8■□□□□ 0.44
Clcn4-203ENSMUST00000210061 B4galnt3Q6L8S8 986 aa17.8■□□□□ 0.44
Clcn4-203ENSMUST00000210061 Ppp2r1aQ76MZ3 589 aa17.79■□□□□ 0.44
Clcn4-203ENSMUST00000210061 Rwdd1Q9CQK7 243 aa17.79■□□□□ 0.44
Clcn4-203ENSMUST00000210061 Gm16486A0A1D5RMD1 1434 aa17.77■□□□□ 0.44
Clcn4-203ENSMUST00000210061 Mroh3A0A1D5RM54 893 aa17.77■□□□□ 0.44
Clcn4-203ENSMUST00000210061 CanxP35564 591 aaKnown RBP17.77■□□□□ 0.44
Clcn4-203ENSMUST00000210061 Plekhh1Q80TI1 1356 aa17.77■□□□□ 0.44
Clcn4-203ENSMUST00000210061 EspnQ9ET47 871 aa17.77■□□□□ 0.43
Clcn4-203ENSMUST00000210061 Rab3gap2Q8BMG7 1366 aa17.77■□□□□ 0.43
Clcn4-203ENSMUST00000210061 Lrriq1Q0P5X1 1673 aa17.76■□□□□ 0.43
Clcn4-203ENSMUST00000210061 Slc4a1apE9PX68 744 aa17.76■□□□□ 0.43
Clcn4-203ENSMUST00000210061 Atf7ipQ7TT18 1306 aa17.76■□□□□ 0.43
Clcn4-203ENSMUST00000210061 Rnf17Q99MV7 1640 aa17.76■□□□□ 0.43
Clcn4-203ENSMUST00000210061 Edc4Q3UJB9 1406 aaKnown RBP17.75■□□□□ 0.43
Clcn4-203ENSMUST00000210061 Irx3P81067 507 aa17.75■□□□□ 0.43
Clcn4-203ENSMUST00000210061 Gtf3c3Q3TMP1 882 aa17.74■□□□□ 0.43
Clcn4-203ENSMUST00000210061 Cfap74Q3UY96 1578 aa17.74■□□□□ 0.43
Clcn4-203ENSMUST00000210061 Spag9Q58A65 1321 aaKnown RBP17.74■□□□□ 0.43
Clcn4-203ENSMUST00000210061 Robo2Q7TPD3 1470 aa17.74■□□□□ 0.43
Clcn4-203ENSMUST00000210061 Zmym3Q9JLM4 1370 aa17.74■□□□□ 0.43
Clcn4-203ENSMUST00000210061 Srcin1Q9QWI6 1250 aa17.74■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 47.4 ms