RNA–Protein interactions for RNA: ENSMUST00000197054.1

Gm42949-201, mousemouse

TSL 1 (best) BASIC

Gene Gm42949, Length 2,202 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm42949-201ENSMUST00000197054 Psme1P97371 249 aa8.5□□□□□ -1.05
Gm42949-201ENSMUST00000197054 JmyQ9QXM1 983 aa8.5□□□□□ -1.05
Gm42949-201ENSMUST00000197054 Map3k10Q66L42 940 aa8.49□□□□□ -1.05
Gm42949-201ENSMUST00000197054 Ccdc34Q3UI66 367 aa8.49□□□□□ -1.05
Gm42949-201ENSMUST00000197054 Nob1Q8BW10 403 aa8.49□□□□□ -1.05
Gm42949-201ENSMUST00000197054 Speer3W4VSP1 261 aa8.49□□□□□ -1.05
Gm42949-201ENSMUST00000197054 Plekhg3Q4VAC9 1341 aa8.49□□□□□ -1.05
Gm42949-201ENSMUST00000197054 4930567H17RikQ3V0K5 233 aa8.48□□□□□ -1.05
Gm42949-201ENSMUST00000197054 Ano8Q6PB70 1060 aa8.48□□□□□ -1.05
Gm42949-201ENSMUST00000197054 Slc5a4bQ91ZP4 660 aa8.46□□□□□ -1.06
Gm42949-201ENSMUST00000197054 OatP29758 439 aa8.45□□□□□ -1.06
Gm42949-201ENSMUST00000197054 Gjc2Q8BQU6 440 aa8.45□□□□□ -1.06
Gm42949-201ENSMUST00000197054 TMEM121BQ99MX7 572 aa8.45□□□□□ -1.06
Gm42949-201ENSMUST00000197054 Tfip11Q9ERA6 838 aaKnown RBP8.44□□□□□ -1.06
Gm42949-201ENSMUST00000197054 March10E9PX79 788 aa8.44□□□□□ -1.06
Gm42949-201ENSMUST00000197054 Retreg3Q9CQV4 466 aa8.44□□□□□ -1.06
Gm42949-201ENSMUST00000197054 Spaca7Q9D2S4 182 aa8.44□□□□□ -1.06
Gm42949-201ENSMUST00000197054 SowahdQ8BY98 327 aa8.42□□□□□ -1.06
Gm42949-201ENSMUST00000197054 Pcdh10E9PXQ7 1057 aa8.41□□□□□ -1.06
Gm42949-201ENSMUST00000197054 Myo1bP46735 1107 aa8.41□□□□□ -1.06
Gm42949-201ENSMUST00000197054 Scaf8Q6DID3 1268 aa8.41□□□□□ -1.06
Gm42949-201ENSMUST00000197054 Pola2P33611 600 aa8.41□□□□□ -1.06
Gm42949-201ENSMUST00000197054 Tmc3Q7TQ69 1130 aa8.41□□□□□ -1.06
Gm42949-201ENSMUST00000197054 Cep57l1Q8VDS7 400 aa8.4□□□□□ -1.06
Gm42949-201ENSMUST00000197054 Tsr1Q5SWD9 803 aa8.38□□□□□ -1.07
Gm42949-201ENSMUST00000197054 Zfp777B9EKF4 885 aa8.36□□□□□ -1.07
Gm42949-201ENSMUST00000197054 LrgukQ9D5S7 820 aa8.36□□□□□ -1.07
Gm42949-201ENSMUST00000197054 Fndc3aQ8BX90 1198 aa8.35□□□□□ -1.07
Gm42949-201ENSMUST00000197054 Pdcd7Q9WTY1 482 aa8.35□□□□□ -1.07
Gm42949-201ENSMUST00000197054 Pxylp1Q8BHA9 480 aa8.35□□□□□ -1.07
Gm42949-201ENSMUST00000197054 Gpatch8A2A6A1 1505 aa8.35□□□□□ -1.07
Gm42949-201ENSMUST00000197054 ClmQ7TSN2 230 aa8.34□□□□□ -1.07
Gm42949-201ENSMUST00000197054 OplahQ8K010 1288 aa8.34□□□□□ -1.07
Gm42949-201ENSMUST00000197054 Mllt6B1AR10 1109 aa8.34□□□□□ -1.07
Gm42949-201ENSMUST00000197054 Neurod1Q60867 357 aa8.34□□□□□ -1.07
Gm42949-201ENSMUST00000197054 SnrkQ8VDU5 748 aa8.34□□□□□ -1.07
Gm42949-201ENSMUST00000197054 Trim26Q99PN3 545 aa8.34□□□□□ -1.07
Gm42949-201ENSMUST00000197054 Mfap1aC0HKD8 439 aaKnown RBP8.33□□□□□ -1.08
Gm42949-201ENSMUST00000197054 Mfap1bC0HKD9 439 aaKnown RBP8.33□□□□□ -1.08
Gm42949-201ENSMUST00000197054 FcrlaQ920A9 352 aa8.33□□□□□ -1.08
Gm42949-201ENSMUST00000197054 Creld1Q91XD7 420 aa8.33□□□□□ -1.08
Gm42949-201ENSMUST00000197054 Cfap70D3YVL2 1141 aa8.32□□□□□ -1.08
Gm42949-201ENSMUST00000197054 Farp1F8VPU2 1048 aa8.32□□□□□ -1.08
Gm42949-201ENSMUST00000197054 Dmrta2A2A9A2 531 aa8.31□□□□□ -1.08
Gm42949-201ENSMUST00000197054 Abl2Q4JIM5 1182 aa8.31□□□□□ -1.08
Gm42949-201ENSMUST00000197054 Rbm46P86049 533 aa8.3□□□□□ -1.08
Gm42949-201ENSMUST00000197054 Ccdc85aQ5SP85 500 aa8.3□□□□□ -1.08
Gm42949-201ENSMUST00000197054 Dnm1lQ8K1M6 742 aa8.3□□□□□ -1.08
Gm42949-201ENSMUST00000197054 Armc3A2AU72 881 aa8.29□□□□□ -1.08
Gm42949-201ENSMUST00000197054 Crim1Q9JLL0 1037 aa8.29□□□□□ -1.08
Gm42949-201ENSMUST00000197054 Cyp8b1O88962 500 aa8.28□□□□□ -1.08
Gm42949-201ENSMUST00000197054 Dnajc5gQ8C632 165 aa8.27□□□□□ -1.09
Gm42949-201ENSMUST00000197054 Adamts19P59509 1210 aa8.26□□□□□ -1.09
Gm42949-201ENSMUST00000197054 Mkrn1Q9QXP6 481 aa8.26□□□□□ -1.09
Gm42949-201ENSMUST00000197054 Hdac6Q9Z2V5 1149 aa8.26□□□□□ -1.09
Gm42949-201ENSMUST00000197054 Pcdhb16Q91Y03 802 aa8.25□□□□□ -1.09
Gm42949-201ENSMUST00000197054 Kdm2bQ6P1G2 1309 aa8.24□□□□□ -1.09
Gm42949-201ENSMUST00000197054 Mical1Q8VDP3 1048 aa8.24□□□□□ -1.09
Gm42949-201ENSMUST00000197054 Lemd3Q9WU40 921 aa8.24□□□□□ -1.09
Gm42949-201ENSMUST00000197054 BcanQ61361 883 aa8.23□□□□□ -1.09
Gm42949-201ENSMUST00000197054 Nudt12Q9DCN1 462 aa8.23□□□□□ -1.09
Gm42949-201ENSMUST00000197054 Limd1Q9QXD8 668 aa8.23□□□□□ -1.09
Gm42949-201ENSMUST00000197054 Rgs9O54828 675 aa8.23□□□□□ -1.09
Gm42949-201ENSMUST00000197054 TsksO54887 585 aa8.23□□□□□ -1.09
Gm42949-201ENSMUST00000197054 Q8C6G1 249 aa8.23□□□□□ -1.09
Gm42949-201ENSMUST00000197054 Dpp8Q80YA7 892 aa8.22□□□□□ -1.09
Gm42949-201ENSMUST00000197054 Dsc3P55850 896 aa8.22□□□□□ -1.09
Gm42949-201ENSMUST00000197054 Tbc1d2bQ3U0J8 965 aa8.21□□□□□ -1.09
Gm42949-201ENSMUST00000197054 Znf316Q6PGE4 1016 aa8.21□□□□□ -1.09
Gm42949-201ENSMUST00000197054 Prpmp5E9PXN1 296 aa8.21□□□□□ -1.1
Gm42949-201ENSMUST00000197054 Hsd17b7O88736 334 aa8.21□□□□□ -1.1
Gm42949-201ENSMUST00000197054 Wwc1Q5SXA9 1104 aa8.2□□□□□ -1.1
Gm42949-201ENSMUST00000197054 Sulf1Q8K007 870 aa8.2□□□□□ -1.1
Gm42949-201ENSMUST00000197054 Col9a1Q05722 921 aa8.19□□□□□ -1.1
Gm42949-201ENSMUST00000197054 Igflr1Q3U4N7 345 aa8.19□□□□□ -1.1
Gm42949-201ENSMUST00000197054 Chtf18Q8BIW9 969 aa8.19□□□□□ -1.1
Gm42949-201ENSMUST00000197054 Onecut3Q8K557 490 aa8.19□□□□□ -1.1
Gm42949-201ENSMUST00000197054 Gtf3c6Q9D8P7 227 aa8.19□□□□□ -1.1
Gm42949-201ENSMUST00000197054 MlecQ6ZQI3 291 aaKnown RBP8.18□□□□□ -1.1
Gm42949-201ENSMUST00000197054 Kcna1P16388 495 aa8.18□□□□□ -1.1
Gm42949-201ENSMUST00000197054 Eml3Q8VC03 897 aa8.18□□□□□ -1.1
Gm42949-201ENSMUST00000197054 Ppp2r2dQ925E7 453 aa8.18□□□□□ -1.1
Gm42949-201ENSMUST00000197054 Rbm25B2RY56 838 aaKnown RBP8.17□□□□□ -1.1
Gm42949-201ENSMUST00000197054 Ints3Q7TPD0 1041 aaKnown RBP8.17□□□□□ -1.1
Gm42949-201ENSMUST00000197054 Pcdhgb4Q91XX6 912 aa8.17□□□□□ -1.1
Gm42949-201ENSMUST00000197054 Sirt1Q923E4 737 aa8.17□□□□□ -1.1
Gm42949-201ENSMUST00000197054 SmapQ9R0P4 181 aaKnown RBP8.17□□□□□ -1.1
Gm42949-201ENSMUST00000197054 AU022751B1B0V2 589 aa8.16□□□□□ -1.1
Gm42949-201ENSMUST00000197054 Brd1E9PZ26 1189 aaKnown RBP8.16□□□□□ -1.1
Gm42949-201ENSMUST00000197054 Ivns1abpQ920Q8 642 aa8.15□□□□□ -1.1
Gm42949-201ENSMUST00000197054 Nubp1Q9R060 320 aa8.15□□□□□ -1.1
Gm42949-201ENSMUST00000197054 Ccdc61Q3UJV1 511 aa8.15□□□□□ -1.1
Gm42949-201ENSMUST00000197054 Mrgprb8Q7TN51 330 aa8.15□□□□□ -1.1
Gm42949-201ENSMUST00000197054 Foxp4Q9DBY0 795 aaKnown RBP8.15□□□□□ -1.1
Gm42949-201ENSMUST00000197054 Usp3Q91W36 520 aaKnown RBP8.14□□□□□ -1.11
Gm42949-201ENSMUST00000197054 Gm10563F6WIE4 79 aa8.14□□□□□ -1.11
Gm42949-201ENSMUST00000197054 ErfeQ6PGN1 340 aa8.14□□□□□ -1.11
Gm42949-201ENSMUST00000197054 Cog6Q8R3I3 657 aa8.14□□□□□ -1.11
Gm42949-201ENSMUST00000197054 Ogfod1Q3U0K8 545 aa8.13□□□□□ -1.11
Gm42949-201ENSMUST00000197054 Gm20503G3UZK1 150 aa8.13□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 28.1 ms