RNA–Protein interactions for RNA: ENSMUST00000190449.1

Msh4-205, Transcript of MutS protein homolog 4, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh4, Length 3,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4-205ENSMUST00000190449 Cc2d2bA0A286YDU8 1405 aa11.63□□□□□ -0.55
Msh4-205ENSMUST00000190449 Rgl3Q3UYI5 709 aa11.62□□□□□ -0.55
Msh4-205ENSMUST00000190449 Caskin1Q6P9K8 1431 aa11.62□□□□□ -0.55
Msh4-205ENSMUST00000190449 Rock1P70335 1354 aa11.62□□□□□ -0.55
Msh4-205ENSMUST00000190449 Slc4a3P16283 1227 aa11.62□□□□□ -0.55
Msh4-205ENSMUST00000190449 Eif4g3Q80XI3 1579 aaKnown RBP11.61□□□□□ -0.55
Msh4-205ENSMUST00000190449 Mroh2aD3Z750 1679 aa11.61□□□□□ -0.55
Msh4-205ENSMUST00000190449 Prkrip1Q9CWV6 186 aaKnown RBP11.61□□□□□ -0.55
Msh4-205ENSMUST00000190449 Magi1Q6RHR9 1471 aa11.61□□□□□ -0.55
Msh4-205ENSMUST00000190449 Kcnh8P59111 1102 aa11.6□□□□□ -0.55
Msh4-205ENSMUST00000190449 Arhgap27A2AB59 869 aa11.6□□□□□ -0.55
Msh4-205ENSMUST00000190449 PtprgQ05909 1442 aa11.59□□□□□ -0.55
Msh4-205ENSMUST00000190449 Ttc41Q692V3 1318 aa11.59□□□□□ -0.55
Msh4-205ENSMUST00000190449 Nup155Q99P88 1391 aaKnown RBP11.59□□□□□ -0.55
Msh4-205ENSMUST00000190449 Fam163aQ8CAA5 168 aa11.59□□□□□ -0.55
Msh4-205ENSMUST00000190449 Tarbp1E9Q368 1579 aa11.59□□□□□ -0.55
Msh4-205ENSMUST00000190449 Adgrl2Q8JZZ7 1487 aa11.59□□□□□ -0.55
Msh4-205ENSMUST00000190449 Plch2A2AP18 1501 aa11.58□□□□□ -0.56
Msh4-205ENSMUST00000190449 Trak1Q6PD31 939 aa11.58□□□□□ -0.56
Msh4-205ENSMUST00000190449 Clasp1Q80TV8 1535 aaKnown RBP11.58□□□□□ -0.56
Msh4-205ENSMUST00000190449 Rrbp1Q99PL5 1605 aaKnown RBP11.58□□□□□ -0.56
Msh4-205ENSMUST00000190449 Prex2Q3LAC4 1598 aa11.57□□□□□ -0.56
Msh4-205ENSMUST00000190449 Arhgap31A6X8Z5 1425 aa11.57□□□□□ -0.56
Msh4-205ENSMUST00000190449 Zfp444Q3TDV8 331 aaKnown RBP11.57□□□□□ -0.56
Msh4-205ENSMUST00000190449 Hdac5Q9Z2V6 1113 aa11.57□□□□□ -0.56
Msh4-205ENSMUST00000190449 Lrrc9Q8CDN9 1456 aa11.56□□□□□ -0.56
Msh4-205ENSMUST00000190449 Zcchc11B2RX14 1644 aaKnown RBP11.56□□□□□ -0.56
Msh4-205ENSMUST00000190449 Hsp90aa1P07901 733 aaKnown RBP11.56□□□□□ -0.56
Msh4-205ENSMUST00000190449 Zscan21Q07231 555 aa11.56□□□□□ -0.56
Msh4-205ENSMUST00000190449 Mak16Q8BGS0 296 aaKnown RBP11.56□□□□□ -0.56
Msh4-205ENSMUST00000190449 Arid4bA2CG63 1314 aaKnown RBP11.56□□□□□ -0.56
Msh4-205ENSMUST00000190449 Iqcf3Q9D498 203 aa11.55□□□□□ -0.56
Msh4-205ENSMUST00000190449 Rpgrip1lQ8CG73 1264 aa11.55□□□□□ -0.56
Msh4-205ENSMUST00000190449 Mast1Q9R1L5 1570 aa11.55□□□□□ -0.56
Msh4-205ENSMUST00000190449 Zmym3Q9JLM4 1370 aa11.55□□□□□ -0.56
Msh4-205ENSMUST00000190449 Ttbk1Q6PCN3 1308 aa11.55□□□□□ -0.56
Msh4-205ENSMUST00000190449 Neurl4Q5NCX5 1563 aa11.54□□□□□ -0.56
Msh4-205ENSMUST00000190449 Anp32bQ9EST5 272 aaKnown RBP11.54□□□□□ -0.56
Msh4-205ENSMUST00000190449 Tex14Q7M6U3 1450 aa11.54□□□□□ -0.56
Msh4-205ENSMUST00000190449 Ppip5k1A2ARP1 1436 aa11.54□□□□□ -0.56
Msh4-205ENSMUST00000190449 Ak9G3UYQ4 1894 aa11.53□□□□□ -0.56
Msh4-205ENSMUST00000190449 Fam208aQ69ZR9 1610 aaKnown RBP11.53□□□□□ -0.56
Msh4-205ENSMUST00000190449 Mbd3Q9Z2D8 285 aaKnown RBP11.53□□□□□ -0.56
Msh4-205ENSMUST00000190449 NeflP08551 543 aa11.52□□□□□ -0.56
Msh4-205ENSMUST00000190449 Tdrd9Q14BI7 1383 aa11.5□□□□□ -0.57
Msh4-205ENSMUST00000190449 Map4P27546 1125 aaKnown RBP11.5□□□□□ -0.57
Msh4-205ENSMUST00000190449 Grwd1Q810D6 446 aaKnown RBP11.5□□□□□ -0.57
Msh4-205ENSMUST00000190449 Gm14025A2AP89 1413 aa11.5□□□□□ -0.57
Msh4-205ENSMUST00000190449 Gm32742A0A1B0GT42 1604 aa11.49□□□□□ -0.57
Msh4-205ENSMUST00000190449 Sbno1Q689Z5 1390 aa11.48□□□□□ -0.57
Msh4-205ENSMUST00000190449 Ssh2Q5SW75 1423 aa11.48□□□□□ -0.57
Msh4-205ENSMUST00000190449 Hecw1Q8K4P8 1604 aa11.47□□□□□ -0.57
Msh4-205ENSMUST00000190449 Pdcd11Q6NS46 1862 aaKnown RBP11.47□□□□□ -0.57
Msh4-205ENSMUST00000190449 Lrriq1Q0P5X1 1673 aa11.47□□□□□ -0.57
Msh4-205ENSMUST00000190449 Ttll13A4Q9F6 804 aa11.47□□□□□ -0.57
Msh4-205ENSMUST00000190449 Gtf3c3Q3TMP1 882 aa11.47□□□□□ -0.57
Msh4-205ENSMUST00000190449 Kdm2bQ6P1G2 1309 aa11.47□□□□□ -0.57
Msh4-205ENSMUST00000190449 Adamts13Q769J6 1426 aa11.47□□□□□ -0.57
Msh4-205ENSMUST00000190449 Nkx1-2P42580 305 aa11.46□□□□□ -0.57
Msh4-205ENSMUST00000190449 Irx3P81067 507 aa11.46□□□□□ -0.57
Msh4-205ENSMUST00000190449 Dnmt1P13864 1620 aaKnown RBP11.46□□□□□ -0.57
Msh4-205ENSMUST00000190449 Rnf17Q99MV7 1640 aa11.46□□□□□ -0.57
Msh4-205ENSMUST00000190449 Q7TT23 1179 aa11.46□□□□□ -0.58
Msh4-205ENSMUST00000190449 PrxO55103 1391 aa11.46□□□□□ -0.58
Msh4-205ENSMUST00000190449 Atp7aQ64430 1491 aa11.46□□□□□ -0.58
Msh4-205ENSMUST00000190449 Clstn2Q9ER65 966 aa11.45□□□□□ -0.58
Msh4-205ENSMUST00000190449 Robo2Q7TPD3 1470 aa11.44□□□□□ -0.58
Msh4-205ENSMUST00000190449 Fancd2Q80V62 1450 aa11.44□□□□□ -0.58
Msh4-205ENSMUST00000190449 Pola1P33609 1465 aa11.44□□□□□ -0.58
Msh4-205ENSMUST00000190449 ChgaP26339 463 aaKnown RBP11.44□□□□□ -0.58
Msh4-205ENSMUST00000190449 Cep170Q6A065 1588 aa11.43□□□□□ -0.58
Msh4-205ENSMUST00000190449 Cd109Q8R422 1442 aa11.43□□□□□ -0.58
Msh4-205ENSMUST00000190449 Atf7ipQ7TT18 1306 aa11.43□□□□□ -0.58
Msh4-205ENSMUST00000190449 Trappc8E9PWG2 1437 aa11.43□□□□□ -0.58
Msh4-205ENSMUST00000190449 Cfap74Q3UY96 1578 aa11.43□□□□□ -0.58
Msh4-205ENSMUST00000190449 Kif16bB1AVY7 1312 aa11.42□□□□□ -0.58
Msh4-205ENSMUST00000190449 Gm16486A0A1D5RMD1 1434 aa11.42□□□□□ -0.58
Msh4-205ENSMUST00000190449 Plekhh1Q80TI1 1356 aa11.41□□□□□ -0.58
Msh4-205ENSMUST00000190449 AnkarA2RT91 1465 aa11.41□□□□□ -0.58
Msh4-205ENSMUST00000190449 Pank3Q8R2W9 370 aa11.41□□□□□ -0.58
Msh4-205ENSMUST00000190449 Zscan10Q3URR7 782 aa11.4□□□□□ -0.58
Msh4-205ENSMUST00000190449 Itsn2Q9Z0R6 1659 aa11.4□□□□□ -0.58
Msh4-205ENSMUST00000190449 EspnQ9ET47 871 aa11.39□□□□□ -0.59
Msh4-205ENSMUST00000190449 Tmf1B9EKI3 1091 aa11.39□□□□□ -0.59
Msh4-205ENSMUST00000190449 Mre11Q61216 706 aa11.39□□□□□ -0.59
Msh4-205ENSMUST00000190449 Tulp4Q9JIL5 1547 aa11.39□□□□□ -0.59
Msh4-205ENSMUST00000190449 Kiaa1210E9Q0C6 1637 aa11.38□□□□□ -0.59
Msh4-205ENSMUST00000190449 Inpp5dQ9ES52 1191 aa11.38□□□□□ -0.59
Msh4-205ENSMUST00000190449 Rab3gap2Q8BMG7 1366 aa11.38□□□□□ -0.59
Msh4-205ENSMUST00000190449 Rad21Q61550 635 aaKnown RBP11.37□□□□□ -0.59
Msh4-205ENSMUST00000190449 Pdlim2Q8R1G6 349 aa11.37□□□□□ -0.59
Msh4-205ENSMUST00000190449 Arhgap5P97393 1501 aa11.37□□□□□ -0.59
Msh4-205ENSMUST00000190449 NudcO35685 332 aaKnown RBP11.36□□□□□ -0.59
Msh4-205ENSMUST00000190449 Rwdd1Q9CQK7 243 aa11.36□□□□□ -0.59
Msh4-205ENSMUST00000190449 CanxP35564 591 aaKnown RBP11.36□□□□□ -0.59
Msh4-205ENSMUST00000190449 Edc4Q3UJB9 1406 aaKnown RBP11.36□□□□□ -0.59
Msh4-205ENSMUST00000190449 Abcc3B2RX12 1523 aa11.36□□□□□ -0.59
Msh4-205ENSMUST00000190449 Rusc2Q80U22 1514 aa11.36□□□□□ -0.59
Msh4-205ENSMUST00000190449 Abca17E9PX95 1733 aa11.35□□□□□ -0.59
Msh4-205ENSMUST00000190449 Uggt2E9Q4X2 1504 aa11.35□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 810.9 ms