RNA–Protein interactions for RNA: ENSMUST00000172332.3

Ccdc71l-201, Transcript of Coiled-coil domain-containing 71-like, mousemouse

APPRIS P1 BASIC

Gene Ccdc71l, Length 4,240 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71l-201ENSMUST00000172332 Cc2d2bA0A286YDU8 1405 aa20.09■□□□□ 0.81
Ccdc71l-201ENSMUST00000172332 Kif7B7ZNG0 1348 aa20.09■□□□□ 0.81
Ccdc71l-201ENSMUST00000172332 Spag9Q58A65 1321 aaKnown RBP20.09■□□□□ 0.81
Ccdc71l-201ENSMUST00000172332 Utp14aQ640M1 767 aaKnown RBP20.08■□□□□ 0.81
Ccdc71l-201ENSMUST00000172332 Duox2A2AQ99 1517 aa20.08■□□□□ 0.81
Ccdc71l-201ENSMUST00000172332 Rtf1A2AQ19 715 aaKnown RBP20.07■□□□□ 0.8
Ccdc71l-201ENSMUST00000172332 Ankrd36D3Z4K0 1415 aa20.06■□□□□ 0.8
Ccdc71l-201ENSMUST00000172332 Txndc2Q6P902 515 aa20.06■□□□□ 0.8
Ccdc71l-201ENSMUST00000172332 Efcab5A0JP43 1406 aa20.06■□□□□ 0.8
Ccdc71l-201ENSMUST00000172332 PrkcshO08795 521 aa20.06■□□□□ 0.8
Ccdc71l-201ENSMUST00000172332 Casc1Q6TDU8 730 aa20.04■□□□□ 0.8
Ccdc71l-201ENSMUST00000172332 Jph4Q80WT0 628 aa20.04■□□□□ 0.8
Ccdc71l-201ENSMUST00000172332 Kcnh8P59111 1102 aa20.04■□□□□ 0.8
Ccdc71l-201ENSMUST00000172332 Mrc2Q64449 1479 aa20.04■□□□□ 0.8
Ccdc71l-201ENSMUST00000172332 Ccar1Q8CH18 1146 aaKnown RBP20.03■□□□□ 0.8
Ccdc71l-201ENSMUST00000172332 Sart3Q9JLI8 962 aaKnown RBP20.03■□□□□ 0.8
Ccdc71l-201ENSMUST00000172332 HnrnpuQ8VEK3 800 aaKnown RBP20.03■□□□□ 0.8
Ccdc71l-201ENSMUST00000172332 Erich6bQ9D4S6 220 aa20.03■□□□□ 0.8
Ccdc71l-201ENSMUST00000172332 Q3TQI7 289 aaKnown RBP20.02■□□□□ 0.8
Ccdc71l-201ENSMUST00000172332 Ccdc60Q8C4J0 545 aa20.01■□□□□ 0.79
Ccdc71l-201ENSMUST00000172332 Vps8Q0P5W1 1427 aa20.01■□□□□ 0.79
Ccdc71l-201ENSMUST00000172332 AU015836B2RUM3 263 aa20.01■□□□□ 0.79
Ccdc71l-201ENSMUST00000172332 Wdr62Q3U3T8 1523 aa20.01■□□□□ 0.79
Ccdc71l-201ENSMUST00000172332 Psme1P97371 249 aa20■□□□□ 0.79
Ccdc71l-201ENSMUST00000172332 Eif2s2Q99L45 331 aaKnown RBP20■□□□□ 0.79
Ccdc71l-201ENSMUST00000172332 Ccdc146E9Q9F7 977 aa19.99■□□□□ 0.79
Ccdc71l-201ENSMUST00000172332 GsdmaQ9EST1 446 aa19.99■□□□□ 0.79
Ccdc71l-201ENSMUST00000172332 Pes1Q9EQ61 584 aaKnown RBP19.98■□□□□ 0.79
Ccdc71l-201ENSMUST00000172332 Mink1Q9JM52 1308 aa19.98■□□□□ 0.79
Ccdc71l-201ENSMUST00000172332 Plb1Q3TTY0 1478 aa19.98■□□□□ 0.79
Ccdc71l-201ENSMUST00000172332 PnisrA2AJT4 805 aaKnown RBP19.97■□□□□ 0.79
Ccdc71l-201ENSMUST00000172332 Soga1E1U8D0 1418 aa19.96■□□□□ 0.79
Ccdc71l-201ENSMUST00000172332 Arhgef5E9Q7D5 1581 aa19.96■□□□□ 0.79
Ccdc71l-201ENSMUST00000172332 Ccdc30Q8BVF4 654 aa19.96■□□□□ 0.79
Ccdc71l-201ENSMUST00000172332 Dhx9O70133 1380 aaKnown RBP19.95■□□□□ 0.78
Ccdc71l-201ENSMUST00000172332 PogzQ8BZH4 1409 aaKnown RBP19.95■□□□□ 0.78
Ccdc71l-201ENSMUST00000172332 Ak7Q9D2H2 614 aa19.95■□□□□ 0.78
Ccdc71l-201ENSMUST00000172332 Pank1Q8K4K6 548 aa19.94■□□□□ 0.78
Ccdc71l-201ENSMUST00000172332 Clstn1Q9EPL2 979 aa19.94■□□□□ 0.78
Ccdc71l-201ENSMUST00000172332 Top2bQ64511 1612 aa19.94■□□□□ 0.78
Ccdc71l-201ENSMUST00000172332 Zfp444Q3TDV8 331 aaKnown RBP19.94■□□□□ 0.78
Ccdc71l-201ENSMUST00000172332 Pcmtd1P59913 357 aa19.94■□□□□ 0.78
Ccdc71l-201ENSMUST00000172332 Shq1Q7TMX5 569 aa19.94■□□□□ 0.78
Ccdc71l-201ENSMUST00000172332 Ttll5Q8CHB8 1328 aa19.94■□□□□ 0.78
Ccdc71l-201ENSMUST00000172332 Cc2d1aQ8K1A6 943 aa19.93■□□□□ 0.78
Ccdc71l-201ENSMUST00000172332 Ift140E9PY46 1464 aa19.92■□□□□ 0.78
Ccdc71l-201ENSMUST00000172332 SlkO54988 1233 aa19.92■□□□□ 0.78
Ccdc71l-201ENSMUST00000172332 Pde4cQ3UEI1 686 aa19.92■□□□□ 0.78
Ccdc71l-201ENSMUST00000172332 Stard8Q8K031 1019 aa19.91■□□□□ 0.78
Ccdc71l-201ENSMUST00000172332 CenpjQ569L8 1344 aa19.91■□□□□ 0.78
Ccdc71l-201ENSMUST00000172332 Ttll13A4Q9F6 804 aa19.91■□□□□ 0.78
Ccdc71l-201ENSMUST00000172332 MccE9PWI3 1003 aa19.91■□□□□ 0.78
Ccdc71l-201ENSMUST00000172332 MlecQ6ZQI3 291 aaKnown RBP19.9■□□□□ 0.78
Ccdc71l-201ENSMUST00000172332 Sh3bp5Q9Z131 463 aa19.9■□□□□ 0.78
Ccdc71l-201ENSMUST00000172332 Ralbp1Q62172 648 aa19.89■□□□□ 0.78
Ccdc71l-201ENSMUST00000172332 Rassf8Q8CJ96 419 aa19.89■□□□□ 0.77
Ccdc71l-201ENSMUST00000172332 NrkQ9R0G8 1455 aa19.89■□□□□ 0.77
Ccdc71l-201ENSMUST00000172332 KarsQ99MN1 595 aaKnown RBP19.89■□□□□ 0.77
Ccdc71l-201ENSMUST00000172332 Grin2bQ01097 1482 aa19.89■□□□□ 0.77
Ccdc71l-201ENSMUST00000172332 Zfp777B9EKF4 885 aa19.88■□□□□ 0.77
Ccdc71l-201ENSMUST00000172332 Rfx1P48377 963 aa19.88■□□□□ 0.77
Ccdc71l-201ENSMUST00000172332 Map3k5O35099 1380 aa19.88■□□□□ 0.77
Ccdc71l-201ENSMUST00000172332 G3bp1P97855 465 aaKnown RBP19.87■□□□□ 0.77
Ccdc71l-201ENSMUST00000172332 Mroh2bQ7M6Y6 1581 aa19.87■□□□□ 0.77
Ccdc71l-201ENSMUST00000172332 Nectin2P32507 530 aa19.86■□□□□ 0.77
Ccdc71l-201ENSMUST00000172332 Nutm1Q8BHP2 1126 aa19.85■□□□□ 0.77
Ccdc71l-201ENSMUST00000172332 Prkrip1Q9CWV6 186 aaKnown RBP19.84■□□□□ 0.77
Ccdc71l-201ENSMUST00000172332 CgnP59242 1191 aa19.84■□□□□ 0.77
Ccdc71l-201ENSMUST00000172332 Trim58Q5NCC9 485 aa19.84■□□□□ 0.77
Ccdc71l-201ENSMUST00000172332 Brpf1B2RRD7 1212 aa19.83■□□□□ 0.76
Ccdc71l-201ENSMUST00000172332 Gtf3c3Q3TMP1 882 aa19.82■□□□□ 0.76
Ccdc71l-201ENSMUST00000172332 Apaf1O88879 1249 aa19.82■□□□□ 0.76
Ccdc71l-201ENSMUST00000172332 Kif16bB1AVY7 1312 aa19.82■□□□□ 0.76
Ccdc71l-201ENSMUST00000172332 Arhgap31A6X8Z5 1425 aa19.82■□□□□ 0.76
Ccdc71l-201ENSMUST00000172332 Cabp4Q8VHC5 271 aa19.81■□□□□ 0.76
Ccdc71l-201ENSMUST00000172332 Cux1P53564 1515 aa19.81■□□□□ 0.76
Ccdc71l-201ENSMUST00000172332 Stk31Q99MW1 1018 aa19.81■□□□□ 0.76
Ccdc71l-201ENSMUST00000172332 Puf60Q3UEB3 564 aaKnown RBP19.8■□□□□ 0.76
Ccdc71l-201ENSMUST00000172332 Ppp2r1aQ76MZ3 589 aa19.8■□□□□ 0.76
Ccdc71l-201ENSMUST00000172332 MecomP14404 1042 aa19.79■□□□□ 0.76
Ccdc71l-201ENSMUST00000172332 Washc2Q6PGL7 1334 aa19.79■□□□□ 0.76
Ccdc71l-201ENSMUST00000172332 Ylpm1Q9R0I7 1386 aaKnown RBP19.79■□□□□ 0.76
Ccdc71l-201ENSMUST00000172332 Tiam1Q60610 1591 aa19.79■□□□□ 0.76
Ccdc71l-201ENSMUST00000172332 ErbinQ80TH2 1402 aa19.77■□□□□ 0.76
Ccdc71l-201ENSMUST00000172332 AqrQ8CFQ3 1481 aaKnown RBP19.77■□□□□ 0.76
Ccdc71l-201ENSMUST00000172332 Iffo2Q8R2V2 512 aa19.77■□□□□ 0.76
Ccdc71l-201ENSMUST00000172332 Chmp4cQ9D7F7 232 aa19.77■□□□□ 0.76
Ccdc71l-201ENSMUST00000172332 Gm7298A0A0N4SVU1 1476 aa19.77■□□□□ 0.75
Ccdc71l-201ENSMUST00000172332 L3mbtl2P59178 703 aa19.76■□□□□ 0.75
Ccdc71l-201ENSMUST00000172332 Triml2E9PW10 424 aa19.76■□□□□ 0.75
Ccdc71l-201ENSMUST00000172332 Mre11Q61216 706 aa19.76■□□□□ 0.75
Ccdc71l-201ENSMUST00000172332 CrebrfQ8CDG5 640 aaKnown RBP19.76■□□□□ 0.75
Ccdc71l-201ENSMUST00000172332 Map3k1P53349 1493 aa19.76■□□□□ 0.75
Ccdc71l-201ENSMUST00000172332 PnnO35691 725 aaKnown RBP19.75■□□□□ 0.75
Ccdc71l-201ENSMUST00000172332 Cd109Q8R422 1442 aa19.75■□□□□ 0.75
Ccdc71l-201ENSMUST00000172332 Eif4g2Q62448 906 aaKnown RBP19.75■□□□□ 0.75
Ccdc71l-201ENSMUST00000172332 Slc4a10Q5DTL9 1118 aa19.75■□□□□ 0.75
Ccdc71l-201ENSMUST00000172332 Ccdc183A2AJB1 534 aa19.73■□□□□ 0.75
Ccdc71l-201ENSMUST00000172332 Q9D9H8 365 aa19.72■□□□□ 0.75
Ccdc71l-201ENSMUST00000172332 CadpsQ80TJ1 1355 aa19.72■□□□□ 0.75
Retrieved 100 of 22,080 RNA–protein pairs in 15.5 ms