RNA–Protein interactions for RNA: ENSMUST00000135636.5

Sort1-203, Transcript of Sortilin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Sort1, Length 6,836 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sort1-203ENSMUST00000135636 Dmrt2Q8BG36 561 aa23.16■■□□□ 1.3
Sort1-203ENSMUST00000135636 Srcin1Q9QWI6 1250 aa23.15■■□□□ 1.3
Sort1-203ENSMUST00000135636 Mfap1aC0HKD8 439 aaKnown RBP23.15■■□□□ 1.3
Sort1-203ENSMUST00000135636 Mfap1bC0HKD9 439 aaKnown RBP23.15■■□□□ 1.3
Sort1-203ENSMUST00000135636 Kif7B7ZNG0 1348 aa23.15■■□□□ 1.3
Sort1-203ENSMUST00000135636 Exoc6Q8R313 802 aa23.14■■□□□ 1.29
Sort1-203ENSMUST00000135636 Tpm3-rs7D3Z2H9 248 aa23.13■■□□□ 1.29
Sort1-203ENSMUST00000135636 Stk31Q99MW1 1018 aa23.13■■□□□ 1.29
Sort1-203ENSMUST00000135636 Soga1E1U8D0 1418 aa23.13■■□□□ 1.29
Sort1-203ENSMUST00000135636 Eif2s2Q99L45 331 aaKnown RBP23.13■■□□□ 1.29
Sort1-203ENSMUST00000135636 AcrbpQ3V140 540 aa23.12■■□□□ 1.29
Sort1-203ENSMUST00000135636 Plagl1Q9JLQ4 704 aa23.12■■□□□ 1.29
Sort1-203ENSMUST00000135636 Hdgfl1Q2VPR5 283 aa23.11■■□□□ 1.29
Sort1-203ENSMUST00000135636 Fnbp4Q6ZQ03 1031 aa23.11■■□□□ 1.29
Sort1-203ENSMUST00000135636 BccipQ9CWI3 316 aa23.1■■□□□ 1.29
Sort1-203ENSMUST00000135636 Erich6bQ9D4S6 220 aa23.1■■□□□ 1.29
Sort1-203ENSMUST00000135636 Tpd52l1O54818 204 aa23.1■■□□□ 1.29
Sort1-203ENSMUST00000135636 Tsen2Q6P7W5 460 aa23.09■■□□□ 1.29
Sort1-203ENSMUST00000135636 Znf704Q9ERQ3 566 aa23.07■■□□□ 1.28
Sort1-203ENSMUST00000135636 Ccdc146E9Q9F7 977 aa23.07■■□□□ 1.28
Sort1-203ENSMUST00000135636 Ccdc96Q9CR92 584 aa23.07■■□□□ 1.28
Sort1-203ENSMUST00000135636 Plekhh2Q8C115 1491 aa23.06■■□□□ 1.28
Sort1-203ENSMUST00000135636 Usp40Q8BWR4 1235 aa23.06■■□□□ 1.28
Sort1-203ENSMUST00000135636 Htatsf1Q8BGC0 757 aa23.05■■□□□ 1.28
Sort1-203ENSMUST00000135636 Neurod6P48986 337 aa23.04■■□□□ 1.28
Sort1-203ENSMUST00000135636 FosbP13346 338 aa23.04■■□□□ 1.28
Sort1-203ENSMUST00000135636 Krt82Q99M74 516 aa23.04■■□□□ 1.28
Sort1-203ENSMUST00000135636 Wdr78E9PYY5 807 aa23.02■■□□□ 1.28
Sort1-203ENSMUST00000135636 Ccp110Q7TSH4 1004 aa23.01■■□□□ 1.27
Sort1-203ENSMUST00000135636 Fam71e1A1L3C1 212 aa23.01■■□□□ 1.27
Sort1-203ENSMUST00000135636 Gm10471E9Q1C7 252 aa23■■□□□ 1.27
Sort1-203ENSMUST00000135636 Arid4aF8VPQ2 1261 aaKnown RBP23■■□□□ 1.27
Sort1-203ENSMUST00000135636 Rsph4aQ8BYM7 716 aa22.99■■□□□ 1.27
Sort1-203ENSMUST00000135636 Chmp4cQ9D7F7 232 aa22.99■■□□□ 1.27
Sort1-203ENSMUST00000135636 Dhx57Q6P5D3 1388 aaKnown RBP22.98■■□□□ 1.27
Sort1-203ENSMUST00000135636 Fyco1Q8VDC1 1437 aa22.98■■□□□ 1.27
Sort1-203ENSMUST00000135636 Ttll5Q8CHB8 1328 aa22.98■■□□□ 1.27
Sort1-203ENSMUST00000135636 Ccdc47Q9D024 483 aaKnown RBP22.97■■□□□ 1.27
Sort1-203ENSMUST00000135636 Abl1P00520 1123 aa22.96■■□□□ 1.27
Sort1-203ENSMUST00000135636 Zranb3Q6NZP1 1069 aa22.95■■□□□ 1.27
Sort1-203ENSMUST00000135636 Arhgap35Q91YM2 1499 aa22.95■■□□□ 1.26
Sort1-203ENSMUST00000135636 Phldb1Q6PDH0 1371 aaKnown RBP22.94■■□□□ 1.26
Sort1-203ENSMUST00000135636 Ccer1Q9CQL2 403 aa22.94■■□□□ 1.26
Sort1-203ENSMUST00000135636 SafbD3YXK2 937 aaKnown RBP22.93■■□□□ 1.26
Sort1-203ENSMUST00000135636 Pank3Q8R2W9 370 aa22.93■■□□□ 1.26
Sort1-203ENSMUST00000135636 Ccdc43Q9CR29 222 aaKnown RBP22.93■■□□□ 1.26
Sort1-203ENSMUST00000135636 Q9D9H8 365 aa22.93■■□□□ 1.26
Sort1-203ENSMUST00000135636 Mak16Q8BGS0 296 aaKnown RBP22.92■■□□□ 1.26
Sort1-203ENSMUST00000135636 Ccdc88bQ4QRL3 1481 aa22.92■■□□□ 1.26
Sort1-203ENSMUST00000135636 Cdca7Q9D0M2 382 aa22.92■■□□□ 1.26
Sort1-203ENSMUST00000135636 Pde3bQ61409 1100 aa22.92■■□□□ 1.26
Sort1-203ENSMUST00000135636 WrnO09053 1401 aa22.92■■□□□ 1.26
Sort1-203ENSMUST00000135636 Smg7Q5RJH6 1138 aaKnown RBP22.91■■□□□ 1.26
Sort1-203ENSMUST00000135636 Gm21969J3QJZ1 289 aa22.91■■□□□ 1.26
Sort1-203ENSMUST00000135636 Smc4Q8CG47 1286 aa22.91■■□□□ 1.26
Sort1-203ENSMUST00000135636 Ccdc60Q8C4J0 545 aa22.9■■□□□ 1.26
Sort1-203ENSMUST00000135636 Hs1bp3Q3TC93 395 aa22.89■■□□□ 1.26
Sort1-203ENSMUST00000135636 Znf428Q8C1M2 176 aa22.88■■□□□ 1.25
Sort1-203ENSMUST00000135636 Ccnb3Q810T2 1396 aa22.88■■□□□ 1.25
Sort1-203ENSMUST00000135636 R3hcc1Q8BSI6 488 aa22.88■■□□□ 1.25
Sort1-203ENSMUST00000135636 Cecr2E9Q2Z1 1453 aa22.88■■□□□ 1.25
Sort1-203ENSMUST00000135636 Fmn1Q05860 1466 aa22.88■■□□□ 1.25
Sort1-203ENSMUST00000135636 Zscan21Q07231 555 aa22.87■■□□□ 1.25
Sort1-203ENSMUST00000135636 Znf697Q569E7 569 aa22.87■■□□□ 1.25
Sort1-203ENSMUST00000135636 Ddx11Q6AXC6 880 aa22.87■■□□□ 1.25
Sort1-203ENSMUST00000135636 Supt16hQ920B9 1047 aa22.86■■□□□ 1.25
Sort1-203ENSMUST00000135636 Gm21698A0A087WQP8 267 aa22.86■■□□□ 1.25
Sort1-203ENSMUST00000135636 Gm21671G3UY31 267 aa22.86■■□□□ 1.25
Sort1-203ENSMUST00000135636 Odf2A3KGV1 830 aaKnown RBP22.86■■□□□ 1.25
Sort1-203ENSMUST00000135636 Tceal9Q9DD24 104 aa22.85■■□□□ 1.25
Sort1-203ENSMUST00000135636 Fam193aQ8CGI1 1231 aaKnown RBP22.85■■□□□ 1.25
Sort1-203ENSMUST00000135636 CrcpO35427 148 aa22.85■■□□□ 1.25
Sort1-203ENSMUST00000135636 Gpatch11Q3UFS4 262 aa22.84■■□□□ 1.25
Sort1-203ENSMUST00000135636 TatQ8QZR1 454 aa22.84■■□□□ 1.25
Sort1-203ENSMUST00000135636 Ell2Q3UKU1 639 aa22.83■■□□□ 1.25
Sort1-203ENSMUST00000135636 Chmp5Q9D7S9 219 aa22.83■■□□□ 1.25
Sort1-203ENSMUST00000135636 IkQ9Z1M8 557 aaKnown RBP22.83■■□□□ 1.25
Sort1-203ENSMUST00000135636 Cep162Q6ZQ06 1403 aa22.83■■□□□ 1.25
Sort1-203ENSMUST00000135636 Gm973E9Q295 1059 aa22.83■■□□□ 1.25
Sort1-203ENSMUST00000135636 Inpp5dQ9ES52 1191 aa22.83■■□□□ 1.25
Sort1-203ENSMUST00000135636 Cc2d2bA0A286YDU8 1405 aa22.82■■□□□ 1.24
Sort1-203ENSMUST00000135636 Bicdl1A0JNT9 577 aa22.82■■□□□ 1.24
Sort1-203ENSMUST00000135636 Rad54l2Q99NG0 1466 aa22.82■■□□□ 1.24
Sort1-203ENSMUST00000135636 Acsbg1Q99PU5 721 aa22.81■■□□□ 1.24
Sort1-203ENSMUST00000135636 Q8C5K5 320 aa22.8■■□□□ 1.24
Sort1-203ENSMUST00000135636 Triml2E9PW10 424 aa22.77■■□□□ 1.24
Sort1-203ENSMUST00000135636 Nectin2P32507 530 aa22.77■■□□□ 1.24
Sort1-203ENSMUST00000135636 Cnnm1Q0GA42 951 aa22.77■■□□□ 1.24
Sort1-203ENSMUST00000135636 Speer4bQ9D9F7 267 aa22.76■■□□□ 1.23
Sort1-203ENSMUST00000135636 Ccdc27Q3V036 639 aa22.75■■□□□ 1.23
Sort1-203ENSMUST00000135636 Kdm4aQ8BW72 1064 aa22.75■■□□□ 1.23
Sort1-203ENSMUST00000135636 Usp16Q99LG0 825 aa22.75■■□□□ 1.23
Sort1-203ENSMUST00000135636 Nutm1Q8BHP2 1126 aa22.74■■□□□ 1.23
Sort1-203ENSMUST00000135636 Afap1Q80YS6 731 aa22.74■■□□□ 1.23
Sort1-203ENSMUST00000135636 Adam1bQ8R534 806 aa22.74■■□□□ 1.23
Sort1-203ENSMUST00000135636 ErbinQ80TH2 1402 aa22.74■■□□□ 1.23
Sort1-203ENSMUST00000135636 Smarce1O54941 411 aaKnown RBP22.74■■□□□ 1.23
Sort1-203ENSMUST00000135636 Taok2Q6ZQ29 1240 aa22.74■■□□□ 1.23
Sort1-203ENSMUST00000135636 CntlnA2AM05 1397 aa22.74■■□□□ 1.23
Sort1-203ENSMUST00000135636 Tpm4Q6IRU2 248 aa22.74■■□□□ 1.23
Retrieved 100 of 22,080 RNA–protein pairs in 8.2 ms