RNA–Protein interactions for RNA: ENSMUST00000111233.7

Limk1-202, Transcript of LIM domain kinase 1, mousemouse

TSL 1 (best) BASIC

Gene Limk1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Limk1-202ENSMUST00000111233 Rpgrip1lQ8CG73 1264 aa13.62□□□□□ -0.23
Limk1-202ENSMUST00000111233 Pelp1Q9DBD5 1123 aaKnown RBP13.61□□□□□ -0.23
Limk1-202ENSMUST00000111233 Caskin1Q6P9K8 1431 aa13.61□□□□□ -0.23
Limk1-202ENSMUST00000111233 Rtl5Q5DTT4 599 aa13.6□□□□□ -0.23
Limk1-202ENSMUST00000111233 Dot1lQ6XZL8 1540 aa13.6□□□□□ -0.23
Limk1-202ENSMUST00000111233 Fmn2Q9JL04 1578 aa13.59□□□□□ -0.23
Limk1-202ENSMUST00000111233 Ssh2Q5SW75 1423 aa13.59□□□□□ -0.23
Limk1-202ENSMUST00000111233 Asxl1P59598 1514 aa13.59□□□□□ -0.23
Limk1-202ENSMUST00000111233 Rad21Q61550 635 aaKnown RBP13.58□□□□□ -0.24
Limk1-202ENSMUST00000111233 Dnmt1P13864 1620 aaKnown RBP13.58□□□□□ -0.24
Limk1-202ENSMUST00000111233 Q7TT23 1179 aa13.57□□□□□ -0.24
Limk1-202ENSMUST00000111233 Sart1Q9Z315 806 aaKnown RBP13.57□□□□□ -0.24
Limk1-202ENSMUST00000111233 Trappc8E9PWG2 1437 aa13.57□□□□□ -0.24
Limk1-202ENSMUST00000111233 Polr3aB2RXC6 1390 aa13.57□□□□□ -0.24
Limk1-202ENSMUST00000111233 Cpsf1Q9EPU4 1441 aaKnown RBP13.57□□□□□ -0.24
Limk1-202ENSMUST00000111233 Arhgap5P97393 1501 aa13.56□□□□□ -0.24
Limk1-202ENSMUST00000111233 Ifit1bl1D3Z6F0 470 aa13.56□□□□□ -0.24
Limk1-202ENSMUST00000111233 Iqgap1Q9JKF1 1657 aaKnown RBP13.56□□□□□ -0.24
Limk1-202ENSMUST00000111233 Rock2P70336 1388 aa13.56□□□□□ -0.24
Limk1-202ENSMUST00000111233 Lrrc9Q8CDN9 1456 aa13.55□□□□□ -0.24
Limk1-202ENSMUST00000111233 Cd109Q8R422 1442 aa13.55□□□□□ -0.24
Limk1-202ENSMUST00000111233 Fancd2Q80V62 1450 aa13.55□□□□□ -0.24
Limk1-202ENSMUST00000111233 DroshaQ5HZJ0 1373 aaKnown RBP13.55□□□□□ -0.24
Limk1-202ENSMUST00000111233 Clstn2Q9ER65 966 aa13.54□□□□□ -0.24
Limk1-202ENSMUST00000111233 PtprgQ05909 1442 aa13.54□□□□□ -0.24
Limk1-202ENSMUST00000111233 Atp7aQ64430 1491 aa13.54□□□□□ -0.24
Limk1-202ENSMUST00000111233 Rusc2Q80U22 1514 aa13.54□□□□□ -0.24
Limk1-202ENSMUST00000111233 Erbb3Q61526 1339 aa13.54□□□□□ -0.24
Limk1-202ENSMUST00000111233 Egfem1Q8C088 590 aa13.53□□□□□ -0.24
Limk1-202ENSMUST00000111233 Anp32bQ9EST5 272 aaKnown RBP13.53□□□□□ -0.24
Limk1-202ENSMUST00000111233 Zscan21Q07231 555 aa13.53□□□□□ -0.24
Limk1-202ENSMUST00000111233 Ttbk1Q6PCN3 1308 aa13.53□□□□□ -0.24
Limk1-202ENSMUST00000111233 Fam208aQ69ZR9 1610 aaKnown RBP13.52□□□□□ -0.24
Limk1-202ENSMUST00000111233 Zfp444Q3TDV8 331 aaKnown RBP13.52□□□□□ -0.24
Limk1-202ENSMUST00000111233 Ifnlr1Q8CGK5 535 aa13.52□□□□□ -0.25
Limk1-202ENSMUST00000111233 Pank3Q8R2W9 370 aa13.52□□□□□ -0.25
Limk1-202ENSMUST00000111233 Erich6D3Z6S9 713 aa13.51□□□□□ -0.25
Limk1-202ENSMUST00000111233 Adgrl2Q8JZZ7 1487 aa13.51□□□□□ -0.25
Limk1-202ENSMUST00000111233 Inpp5dQ9ES52 1191 aa13.51□□□□□ -0.25
Limk1-202ENSMUST00000111233 Rock1P70335 1354 aa13.5□□□□□ -0.25
Limk1-202ENSMUST00000111233 Tarbp1E9Q368 1579 aa13.5□□□□□ -0.25
Limk1-202ENSMUST00000111233 Rrbp1Q99PL5 1605 aaKnown RBP13.49□□□□□ -0.25
Limk1-202ENSMUST00000111233 Mak16Q8BGS0 296 aaKnown RBP13.49□□□□□ -0.25
Limk1-202ENSMUST00000111233 Kdm5cP41230 1554 aa13.49□□□□□ -0.25
Limk1-202ENSMUST00000111233 Gm32742A0A1B0GT42 1604 aa13.48□□□□□ -0.25
Limk1-202ENSMUST00000111233 Mroh3A0A1D5RM54 893 aa13.48□□□□□ -0.25
Limk1-202ENSMUST00000111233 PrxO55103 1391 aa13.48□□□□□ -0.25
Limk1-202ENSMUST00000111233 Tcerg1Q8CGF7 1100 aaKnown RBP13.47□□□□□ -0.25
Limk1-202ENSMUST00000111233 Map3k5O35099 1380 aa13.47□□□□□ -0.25
Limk1-202ENSMUST00000111233 Spag9Q58A65 1321 aaKnown RBP13.46□□□□□ -0.25
Limk1-202ENSMUST00000111233 Kank1E9Q238 1360 aa13.46□□□□□ -0.25
Limk1-202ENSMUST00000111233 Kdm2aP59997 1161 aa13.46□□□□□ -0.25
Limk1-202ENSMUST00000111233 Tubgcp6G5E8P0 1769 aa13.45□□□□□ -0.26
Limk1-202ENSMUST00000111233 Eif4g3Q80XI3 1579 aaKnown RBP13.45□□□□□ -0.26
Limk1-202ENSMUST00000111233 NeflP08551 543 aa13.44□□□□□ -0.26
Limk1-202ENSMUST00000111233 Pde4cQ3UEI1 686 aa13.44□□□□□ -0.26
Limk1-202ENSMUST00000111233 Fgd6Q69ZL1 1399 aa13.44□□□□□ -0.26
Limk1-202ENSMUST00000111233 Esx1O88933 382 aa13.44□□□□□ -0.26
Limk1-202ENSMUST00000111233 Setd1aE9PYH6 1716 aa13.43□□□□□ -0.26
Limk1-202ENSMUST00000111233 Zscan10Q3URR7 782 aa13.43□□□□□ -0.26
Limk1-202ENSMUST00000111233 Ak9G3UYQ4 1894 aa13.43□□□□□ -0.26
Limk1-202ENSMUST00000111233 Slc4a1apE9PX68 744 aa13.42□□□□□ -0.26
Limk1-202ENSMUST00000111233 Rnf17Q99MV7 1640 aa13.42□□□□□ -0.26
Limk1-202ENSMUST00000111233 Gm14025A2AP89 1413 aa13.42□□□□□ -0.26
Limk1-202ENSMUST00000111233 Cdc42bpbQ7TT50 1713 aa13.42□□□□□ -0.26
Limk1-202ENSMUST00000111233 Gapvd1Q6PAR5 1458 aa13.42□□□□□ -0.26
Limk1-202ENSMUST00000111233 CrbnQ8C7D2 445 aa13.42□□□□□ -0.26
Limk1-202ENSMUST00000111233 Os9Q8K2C7 672 aa13.42□□□□□ -0.26
Limk1-202ENSMUST00000111233 Sall3Q62255 1320 aa13.41□□□□□ -0.26
Limk1-202ENSMUST00000111233 Adamts13Q769J6 1426 aa13.4□□□□□ -0.26
Limk1-202ENSMUST00000111233 Zmym4A2A791 1549 aaKnown RBP13.4□□□□□ -0.26
Limk1-202ENSMUST00000111233 Mast1Q9R1L5 1570 aa13.4□□□□□ -0.26
Limk1-202ENSMUST00000111233 Pdcd11Q6NS46 1862 aaKnown RBP13.39□□□□□ -0.27
Limk1-202ENSMUST00000111233 AI481877A2ALV5 1481 aa13.39□□□□□ -0.27
Limk1-202ENSMUST00000111233 Upf2A2AT37 1269 aaKnown RBP13.39□□□□□ -0.27
Limk1-202ENSMUST00000111233 Tmf1B9EKI3 1091 aa13.39□□□□□ -0.27
Limk1-202ENSMUST00000111233 Prdm10Q3UTQ7 1184 aa13.39□□□□□ -0.27
Limk1-202ENSMUST00000111233 Srcin1Q9QWI6 1250 aa13.38□□□□□ -0.27
Limk1-202ENSMUST00000111233 Ipo9Q91YE6 1041 aa13.38□□□□□ -0.27
Limk1-202ENSMUST00000111233 Edc4Q3UJB9 1406 aaKnown RBP13.37□□□□□ -0.27
Limk1-202ENSMUST00000111233 Plch2A2AP18 1501 aa13.37□□□□□ -0.27
Limk1-202ENSMUST00000111233 Cfap74Q3UY96 1578 aa13.36□□□□□ -0.27
Limk1-202ENSMUST00000111233 Apbb1Q9QXJ1 710 aa13.36□□□□□ -0.27
Limk1-202ENSMUST00000111233 Tulp4Q9JIL5 1547 aa13.35□□□□□ -0.27
Limk1-202ENSMUST00000111233 Cep170Q6A065 1588 aa13.35□□□□□ -0.27
Limk1-202ENSMUST00000111233 Ppip5k1A2ARP1 1436 aa13.35□□□□□ -0.27
Limk1-202ENSMUST00000111233 Ppp2r1aQ76MZ3 589 aa13.35□□□□□ -0.27
Limk1-202ENSMUST00000111233 Prkrip1Q9CWV6 186 aaKnown RBP13.35□□□□□ -0.27
Limk1-202ENSMUST00000111233 B4galnt3Q6L8S8 986 aa13.35□□□□□ -0.27
Limk1-202ENSMUST00000111233 Kif1bQ60575 1816 aaKnown RBP13.35□□□□□ -0.27
Limk1-202ENSMUST00000111233 Prdm16A2A935 1275 aa13.34□□□□□ -0.27
Limk1-202ENSMUST00000111233 Kif16bB1AVY7 1312 aa13.34□□□□□ -0.27
Limk1-202ENSMUST00000111233 Usp54Q8BL06 1588 aaKnown RBP13.34□□□□□ -0.27
Limk1-202ENSMUST00000111233 Atp10dQ8K2X1 1416 aa13.34□□□□□ -0.27
Limk1-202ENSMUST00000111233 ChgaP26339 463 aaKnown RBP13.33□□□□□ -0.27
Limk1-202ENSMUST00000111233 Znf608Q56A10 1511 aa13.33□□□□□ -0.28
Limk1-202ENSMUST00000111233 Stk24Q99KH8 431 aa13.33□□□□□ -0.28
Limk1-202ENSMUST00000111233 NhsB1AV60 1647 aa13.33□□□□□ -0.28
Limk1-202ENSMUST00000111233 Hecw1Q8K4P8 1604 aa13.33□□□□□ -0.28
Limk1-202ENSMUST00000111233 Fam184bQ0KK56 942 aa13.33□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 20.9 ms